RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 TMEM42Q69YG0 159 aa12.44□□□□□ -0.42
LRRK1-201ENST00000388948 CBLN2Q8IUK8 224 aa12.44□□□□□ -0.42
LRRK1-201ENST00000388948 WFDC12Q8WWY7 111 aa12.44□□□□□ -0.42
LRRK1-201ENST00000388948 TRAV41A0A0B4J266 112 aa12.43□□□□□ -0.42
LRRK1-201ENST00000388948 FBLL1A6NHQ2 334 aaKnown RBP12.43□□□□□ -0.42
LRRK1-201ENST00000388948 COL25A1Q9BXS0 654 aaPredicted RBP12.43□□□□□ -0.42
LRRK1-201ENST00000388948 GPR179Q6PRD1 2367 aa12.43□□□□□ -0.42
LRRK1-201ENST00000388948 SLC25A16P16260 332 aa12.43□□□□□ -0.42
LRRK1-201ENST00000388948 RPL35AP18077 110 aaKnown RBP12.43□□□□□ -0.42
LRRK1-201ENST00000388948 PAX8Q06710 450 aa12.43□□□□□ -0.42
LRRK1-201ENST00000388948 Q5PR19 223 aa12.43□□□□□ -0.42
LRRK1-201ENST00000388948 KLHL30-AS1Q8NEE0 82 aa12.43□□□□□ -0.42
LRRK1-201ENST00000388948 OR10AG1Q8NH19 301 aa12.43□□□□□ -0.42
LRRK1-201ENST00000388948 OR52E5Q8NH55 327 aa12.43□□□□□ -0.42
LRRK1-201ENST00000388948 WBP1Q96G27 269 aa12.43□□□□□ -0.42
LRRK1-201ENST00000388948 ZGRF1Q86YA3 2104 aa12.43□□□□□ -0.42
LRRK1-201ENST00000388948 MESP1Q9BRJ9 268 aa12.43□□□□□ -0.42
LRRK1-201ENST00000388948 ERVH48-1M5A8F1 160 aa12.43□□□□□ -0.42
LRRK1-201ENST00000388948 HIST1H2BAQ96A08 127 aa12.43□□□□□ -0.42
LRRK1-201ENST00000388948 DOCK4Q8N1I0 1966 aa12.43□□□□□ -0.42
LRRK1-201ENST00000388948 TRAV20A0A0B4J274 112 aa12.43□□□□□ -0.42
LRRK1-201ENST00000388948 SMDT1Q9H4I9 107 aa12.43□□□□□ -0.42
LRRK1-201ENST00000388948 K7ENP7 123 aa12.43□□□□□ -0.42
LRRK1-201ENST00000388948 KLRD1Q13241 179 aa12.43□□□□□ -0.42
LRRK1-201ENST00000388948 PLSCR4Q9NRQ2 329 aa12.43□□□□□ -0.42
LRRK1-201ENST00000388948 PQLC2LA1A4F0 135 aa12.42□□□□□ -0.42
LRRK1-201ENST00000388948 SLC25A38Q96DW6 304 aa12.42□□□□□ -0.42
LRRK1-201ENST00000388948 CMC4P56277 68 aaPredicted RBP12.42□□□□□ -0.42
LRRK1-201ENST00000388948 IGKV3D-20A0A0C4DH25 116 aa12.42□□□□□ -0.42
LRRK1-201ENST00000388948 CENPWQ5EE01 88 aa12.42□□□□□ -0.42
LRRK1-201ENST00000388948 PRELID3AQ96N28 172 aa12.42□□□□□ -0.42
LRRK1-201ENST00000388948 MAPK1IP1LQ8NDC0 245 aa12.42□□□□□ -0.42
LRRK1-201ENST00000388948 H3BRM9 83 aa12.42□□□□□ -0.42
LRRK1-201ENST00000388948 LCNL1Q6ZST4 164 aa12.42□□□□□ -0.42
LRRK1-201ENST00000388948 OR9G9P0C7N8 305 aa12.41□□□□□ -0.42
LRRK1-201ENST00000388948 PSMG4Q5JS54 123 aa12.41□□□□□ -0.42
LRRK1-201ENST00000388948 C9orf62Q8N4C0 152 aa12.41□□□□□ -0.42
LRRK1-201ENST00000388948 MRPL18Q9H0U6 180 aaKnown RBP12.41□□□□□ -0.42
LRRK1-201ENST00000388948 PHF3Q92576 2039 aaKnown RBP12.41□□□□□ -0.42
LRRK1-201ENST00000388948 ZNF815PA8K554 130 aa12.41□□□□□ -0.42
LRRK1-201ENST00000388948 YPEL1O60688 119 aa12.41□□□□□ -0.42
LRRK1-201ENST00000388948 Q96MF0 132 aa12.41□□□□□ -0.42
LRRK1-201ENST00000388948 YPEL2Q96QA6 119 aa12.41□□□□□ -0.42
LRRK1-201ENST00000388948 BEX4Q9NWD9 120 aaPredicted RBP12.41□□□□□ -0.42
LRRK1-201ENST00000388948 Q0VFX4 171 aa12.41□□□□□ -0.42
LRRK1-201ENST00000388948 ZNF600Q6ZNG1 722 aa12.41□□□□□ -0.42
LRRK1-201ENST00000388948 ZNF525Q8N782 197 aa12.41□□□□□ -0.42
LRRK1-201ENST00000388948 ZNF407Q9C0G0 2248 aa12.41□□□□□ -0.42
LRRK1-201ENST00000388948 TMEM250H0YL14 139 aa12.41□□□□□ -0.42
LRRK1-201ENST00000388948 GPX4P36969 197 aaPredicted RBP12.41□□□□□ -0.42
LRRK1-201ENST00000388948 KCNS1Q96KK3 526 aa12.41□□□□□ -0.42
LRRK1-201ENST00000388948 GPR61Q9BZJ8 451 aa12.41□□□□□ -0.42
LRRK1-201ENST00000388948 CREBBPQ92793 2442 aa12.41□□□□□ -0.42
LRRK1-201ENST00000388948 GRIFINA4D1Z8 144 aa12.4□□□□□ -0.42
LRRK1-201ENST00000388948 ZNF25P17030 456 aaPredicted RBP12.4□□□□□ -0.42
LRRK1-201ENST00000388948 PEX7O00628 323 aa12.4□□□□□ -0.42
LRRK1-201ENST00000388948 OTX1P32242 354 aaPredicted RBP12.4□□□□□ -0.42
LRRK1-201ENST00000388948 BPESC1Q9GZL8 116 aa12.4□□□□□ -0.42
LRRK1-201ENST00000388948 CGAP01215 116 aa12.4□□□□□ -0.42
LRRK1-201ENST00000388948 MORN2Q502X0 79 aa12.4□□□□□ -0.42
LRRK1-201ENST00000388948 PLPPR1Q8TBJ4 325 aa12.4□□□□□ -0.42
LRRK1-201ENST00000388948 CACNG8Q8WXS5 425 aa12.4□□□□□ -0.42
LRRK1-201ENST00000388948 HSPB9Q9BQS6 159 aa12.4□□□□□ -0.42
LRRK1-201ENST00000388948 TMEM160Q9NX00 188 aa12.4□□□□□ -0.42
LRRK1-201ENST00000388948 KIAA1644Q3SXP7 199 aa12.4□□□□□ -0.43
LRRK1-201ENST00000388948 LOC102724200A0A096LPH7 203 aaPredicted RBP12.39□□□□□ -0.43
LRRK1-201ENST00000388948 CNTFRP26992 372 aa12.39□□□□□ -0.43
LRRK1-201ENST00000388948 GATA2P23769 480 aaPredicted RBP12.39□□□□□ -0.43
LRRK1-201ENST00000388948 TM2D1Q9BX74 207 aa12.39□□□□□ -0.43
LRRK1-201ENST00000388948 PPP1R3EQ9H7J1 279 aa12.39□□□□□ -0.43
LRRK1-201ENST00000388948 SIGLEC5O15389 551 aa12.39□□□□□ -0.43
LRRK1-201ENST00000388948 NPCDR1Q9BY65 106 aa12.39□□□□□ -0.43
LRRK1-201ENST00000388948 RPLP1P05386 114 aaKnown RBP12.39□□□□□ -0.43
LRRK1-201ENST00000388948 ASCL4Q6XD76 172 aa12.39□□□□□ -0.43
LRRK1-201ENST00000388948 IGHV2-26A0A0B4J1V2 119 aa12.39□□□□□ -0.43
LRRK1-201ENST00000388948 AGAP20933 346 aa12.39□□□□□ -0.43
LRRK1-201ENST00000388948 SRIP30626 198 aa12.39□□□□□ -0.43
LRRK1-201ENST00000388948 JOSD1Q15040 202 aaPredicted RBP12.39□□□□□ -0.43
LRRK1-201ENST00000388948 LINC00469Q8N7U9 141 aa12.39□□□□□ -0.43
LRRK1-201ENST00000388948 C18orf15Q96N68 181 aa12.39□□□□□ -0.43
LRRK1-201ENST00000388948 CHCHD5Q9BSY4 110 aa12.39□□□□□ -0.43
LRRK1-201ENST00000388948 ANK1P16157 1881 aa12.39□□□□□ -0.43
LRRK1-201ENST00000388948 RNF125Q96EQ8 232 aa12.39□□□□□ -0.43
LRRK1-201ENST00000388948 A0A087WX48 190 aa12.38□□□□□ -0.43
LRRK1-201ENST00000388948 LY6HO94772 140 aa12.38□□□□□ -0.43
LRRK1-201ENST00000388948 PET117Q6UWS5 81 aa12.38□□□□□ -0.43
LRRK1-201ENST00000388948 Q6ZS92 163 aa12.38□□□□□ -0.43
LRRK1-201ENST00000388948 STPG2Q8N412 459 aa12.38□□□□□ -0.43
LRRK1-201ENST00000388948 Q9H3A6 140 aa12.38□□□□□ -0.43
LRRK1-201ENST00000388948 SLC50A1Q9BRV3 221 aa12.38□□□□□ -0.43
LRRK1-201ENST00000388948 AICDAQ9GZX7 198 aa12.38□□□□□ -0.43
LRRK1-201ENST00000388948 F11RQ9Y624 299 aaKnown RBP12.38□□□□□ -0.43
LRRK1-201ENST00000388948 UPK2O00526 184 aa12.38□□□□□ -0.43
LRRK1-201ENST00000388948 PRR30Q53SZ7 412 aaPredicted RBP12.38□□□□□ -0.43
LRRK1-201ENST00000388948 TEX38Q6PEX7 206 aa12.38□□□□□ -0.43
LRRK1-201ENST00000388948 GGACTQ9BVM4 153 aa12.38□□□□□ -0.43
LRRK1-201ENST00000388948 HBBP68871 147 aa12.38□□□□□ -0.43
LRRK1-201ENST00000388948 ERASQ7Z444 233 aa12.38□□□□□ -0.43
LRRK1-201ENST00000388948 EGR1P18146 543 aa12.38□□□□□ -0.43
LRRK1-201ENST00000388948 BEND2Q8NDZ0 799 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms