RNA–Protein interactions for RNA: ENST00000378825.4

CCDC3-201, Transcript of coiled-coil domain containing 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC3, Length 2,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC3-201ENST00000378825 OR10J3Q5JRS4 329 aa15.09■□□□□ 0.01
CCDC3-201ENST00000378825 KIR3DL3Q8N743 410 aa15.09■□□□□ 0.01
CCDC3-201ENST00000378825 NEUROG1Q92886 237 aa15.09■□□□□ 0.01
CCDC3-201ENST00000378825 TMEM14BQ9NUH8 114 aa15.09■□□□□ 0.01
CCDC3-201ENST00000378825 CBY1Q9Y3M2 126 aa15.09■□□□□ 0.01
CCDC3-201ENST00000378825 FAM90A9PA6NNJ1 464 aa15.08■□□□□ 0.01
CCDC3-201ENST00000378825 ZNF891A8MT65 544 aaPredicted RBP15.08■□□□□ 0.01
CCDC3-201ENST00000378825 IGHV3-48P01763 117 aa15.08■□□□□ 0.01
CCDC3-201ENST00000378825 TNXAQ16473 311 aa15.08■□□□□ 0.01
CCDC3-201ENST00000378825 C18orf32Q8TCD1 76 aa15.08■□□□□ 0.01
CCDC3-201ENST00000378825 TRIB1Q96RU8 372 aa15.08■□□□□ 0.01
CCDC3-201ENST00000378825 JPT1Q9UK76 154 aa15.08■□□□□ 0.01
CCDC3-201ENST00000378825 TRGV8A0A0C4DH27 118 aa15.08■□□□□ 0
CCDC3-201ENST00000378825 IGKV1-16P04430 117 aa15.08■□□□□ 0
CCDC3-201ENST00000378825 AMY1AP04745 511 aa15.08■□□□□ 0
CCDC3-201ENST00000378825 GNG10P50151 68 aa15.08■□□□□ 0
CCDC3-201ENST00000378825 SPATA12Q7Z6I5 190 aa15.08■□□□□ 0
CCDC3-201ENST00000378825 ZNF439Q8NDP4 499 aa15.08■□□□□ 0
CCDC3-201ENST00000378825 OR10W1Q8NGF6 305 aa15.08■□□□□ 0
CCDC3-201ENST00000378825 SGK494Q96LW2 274 aa15.08■□□□□ 0
CCDC3-201ENST00000378825 PLEKHA3Q9HB20 300 aa15.08■□□□□ 0
CCDC3-201ENST00000378825 OSTCQ9NRP0 149 aa15.08■□□□□ 0
CCDC3-201ENST00000378825 ZNF355PQ9NSJ1 428 aa15.08■□□□□ 0
CCDC3-201ENST00000378825 CRYABP02511 175 aaKnown RBP15.08■□□□□ 0
CCDC3-201ENST00000378825 APCSP02743 223 aa15.08■□□□□ 0
CCDC3-201ENST00000378825 USF1P22415 310 aaPredicted RBP15.08■□□□□ 0
CCDC3-201ENST00000378825 CD24P25063 80 aa15.08■□□□□ 0
CCDC3-201ENST00000378825 RAB31Q13636 194 aa15.08■□□□□ 0
CCDC3-201ENST00000378825 LHFPL4Q7Z7J7 247 aa15.08■□□□□ 0
CCDC3-201ENST00000378825 IGF2BP2-AS1Q96M15 143 aa15.08■□□□□ 0
CCDC3-201ENST00000378825 SRRM4A7MD48 611 aaKnown RBP15.07■□□□□ 0
CCDC3-201ENST00000378825 SSBP2P81877 361 aaPredicted RBP15.07■□□□□ 0
CCDC3-201ENST00000378825 Q56UQ5 140 aa15.07■□□□□ 0
CCDC3-201ENST00000378825 EBLN2Q6P2I7 272 aa15.07■□□□□ 0
CCDC3-201ENST00000378825 WDR73Q6P4I2 378 aa15.07■□□□□ 0
CCDC3-201ENST00000378825 LYG1Q8N1E2 194 aa15.07■□□□□ 0
CCDC3-201ENST00000378825 GCSAMQ8N6F7 178 aa15.07■□□□□ 0
CCDC3-201ENST00000378825 OR4S2Q8NH73 311 aa15.07■□□□□ 0
CCDC3-201ENST00000378825 ENY2Q9NPA8 101 aa15.07■□□□□ 0
CCDC3-201ENST00000378825 CALYQ9NYX4 217 aa15.07■□□□□ 0
CCDC3-201ENST00000378825 OR51B2Q9Y5P1 312 aa15.07■□□□□ 0
CCDC3-201ENST00000378825 SMIM27A0A1W2PRY6 76 aa15.07■□□□□ 0
CCDC3-201ENST00000378825 IGKV3-15P01624 115 aa15.07■□□□□ 0
CCDC3-201ENST00000378825 RPL8P62917 257 aaKnown RBP15.07■□□□□ 0
CCDC3-201ENST00000378825 DSCAML1Q8TD84 2053 aa15.06■□□□□ 0
CCDC3-201ENST00000378825 SH2D7A6NKC9 451 aaPredicted RBP15.06■□□□□ 0
CCDC3-201ENST00000378825 MT-ND6P03923 174 aa15.06■□□□□ 0
CCDC3-201ENST00000378825 INO80CQ6PI98 192 aaPredicted RBP15.06■□□□□ 0
CCDC3-201ENST00000378825 SPACA3Q8IXA5 215 aa15.06■□□□□ 0
CCDC3-201ENST00000378825 ST6GALNAC6Q969X2 333 aa15.06■□□□□ 0
CCDC3-201ENST00000378825 CACNA1GO43497 2377 aa15.06■□□□□ 0
CCDC3-201ENST00000378825 CEP250Q9BV73 2442 aa15.06■□□□□ 0
CCDC3-201ENST00000378825 ISLRO14498 428 aa15.06■□□□□ 0
CCDC3-201ENST00000378825 MMP23AO75900 390 aa15.06■□□□□ 0
CCDC3-201ENST00000378825 PYYP10082 97 aa15.06■□□□□ 0
CCDC3-201ENST00000378825 TSPOP30536 169 aa15.06■□□□□ 0
CCDC3-201ENST00000378825 PRR27Q6MZM9 219 aa15.06■□□□□ 0
CCDC3-201ENST00000378825 SLC35D1Q9NTN3 355 aa15.06■□□□□ 0
CCDC3-201ENST00000378825 FOXA2Q9Y261 457 aaPredicted RBP15.06■□□□□ 0
CCDC3-201ENST00000378825 OTOGLQ3ZCN5 2332 aa15.06■□□□□ 0
CCDC3-201ENST00000378825 DYSFO75923 2080 aa15.05■□□□□ 0
CCDC3-201ENST00000378825 J3QR06 171 aa15.05■□□□□ 0
CCDC3-201ENST00000378825 M0QZ24 198 aa15.05■□□□□ 0
CCDC3-201ENST00000378825 PMCHL1Q16048 86 aa15.05■□□□□ 0
CCDC3-201ENST00000378825 C17orf58Q2M2W7 97 aa15.05■□□□□ 0
CCDC3-201ENST00000378825 FDCSPQ8NFU4 85 aa15.05■□□□□ 0
CCDC3-201ENST00000378825 SNRNP40Q96DI7 357 aaKnown RBP15.05■□□□□ 0
CCDC3-201ENST00000378825 CORTO00230 105 aa15.05■□□□□ -0
CCDC3-201ENST00000378825 PTTG1IPP53801 180 aa15.05■□□□□ -0
CCDC3-201ENST00000378825 MFAP2P55001 183 aa15.05■□□□□ -0
CCDC3-201ENST00000378825 Q6ZT83 130 aa15.05■□□□□ -0
CCDC3-201ENST00000378825 TMEM178AQ8NBL3 297 aa15.05■□□□□ -0
CCDC3-201ENST00000378825 TMEM167BQ9NRX6 74 aa15.05■□□□□ -0
CCDC3-201ENST00000378825 HLA-DQA1P01909 254 aa15.04■□□□□ -0
CCDC3-201ENST00000378825 PPOXP50336 477 aa15.04■□□□□ -0
CCDC3-201ENST00000378825 MOGAT3Q86VF5 341 aa15.04■□□□□ -0
CCDC3-201ENST00000378825 OR2T6Q8NHC8 308 aa15.04■□□□□ -0
CCDC3-201ENST00000378825 BORCS7Q96B45 105 aa15.04■□□□□ -0
CCDC3-201ENST00000378825 LOXL4Q96JB6 756 aa15.04■□□□□ -0
CCDC3-201ENST00000378825 CLEC5AQ9NY25 188 aa15.04■□□□□ -0
CCDC3-201ENST00000378825 C20orf202A1L168 122 aa15.04■□□□□ -0
CCDC3-201ENST00000378825 VWC2LB2RUY7 222 aa15.04■□□□□ -0
CCDC3-201ENST00000378825 SRRM5B3KS81 715 aa15.04■□□□□ -0
CCDC3-201ENST00000378825 MGST3O14880 152 aa15.04■□□□□ -0
CCDC3-201ENST00000378825 WT1P19544 449 aaPredicted RBP15.04■□□□□ -0
CCDC3-201ENST00000378825 CAMPP49913 170 aa15.04■□□□□ -0
CCDC3-201ENST00000378825 RND1Q92730 232 aa15.04■□□□□ -0
CCDC3-201ENST00000378825 SLC25A10Q9UBX3 287 aaPredicted RBP15.04■□□□□ -0
CCDC3-201ENST00000378825 ADGRG4Q8IZF6 3080 aa15.04■□□□□ -0
CCDC3-201ENST00000378825 SPAARA0A1B0GVQ0 90 aa15.03■□□□□ -0
CCDC3-201ENST00000378825 F2RL2O00254 374 aa15.03■□□□□ -0
CCDC3-201ENST00000378825 TANC2Q9HCD6 1990 aa15.03■□□□□ -0
CCDC3-201ENST00000378825 IGHV2OR16-5A0A0B4J2B6 119 aa15.03■□□□□ -0
CCDC3-201ENST00000378825 PLAUP00749 431 aa15.03■□□□□ -0
CCDC3-201ENST00000378825 IGLL1P15814 213 aa15.03■□□□□ -0
CCDC3-201ENST00000378825 DEFB108BQ8NET1 73 aa15.03■□□□□ -0
CCDC3-201ENST00000378825 KIR2DL2P43627 348 aaPredicted RBP15.02■□□□□ -0
CCDC3-201ENST00000378825 STUMQ69YW2 141 aa15.02■□□□□ -0
CCDC3-201ENST00000378825 RNASEKQ6P5S7 137 aaKnown RBP15.02■□□□□ -0
CCDC3-201ENST00000378825 SLC25A33Q9BSK2 321 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 1242.8 ms