RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 CXorf58Q96LI9 332 aa8.78□□□□□ -1
HSPG2-202ENST00000374676 C2orf50Q96LR7 162 aa8.78□□□□□ -1
HSPG2-202ENST00000374676 CIB3Q96Q77 187 aaPredicted RBP8.78□□□□□ -1
HSPG2-202ENST00000374676 OR5B12Q96R08 314 aa8.78□□□□□ -1
HSPG2-202ENST00000374676 ATP6V0BQ99437 205 aa8.78□□□□□ -1
HSPG2-202ENST00000374676 RANGRFQ9HD47 186 aaPredicted RBP8.78□□□□□ -1
HSPG2-202ENST00000374676 PEF1Q9UBV8 284 aaKnown RBP8.78□□□□□ -1
HSPG2-202ENST00000374676 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.77□□□□□ -1.01
HSPG2-202ENST00000374676 TRBV7-1A0A0A6YYK4 115 aa8.77□□□□□ -1.01
HSPG2-202ENST00000374676 C5orf51A6NDU8 294 aa8.77□□□□□ -1.01
HSPG2-202ENST00000374676 CORTO00230 105 aa8.77□□□□□ -1.01
HSPG2-202ENST00000374676 CCSO14618 274 aa8.77□□□□□ -1.01
HSPG2-202ENST00000374676 NXPH3O95157 252 aa8.77□□□□□ -1.01
HSPG2-202ENST00000374676 NKX2-1P43699 371 aaPredicted RBP8.77□□□□□ -1.01
HSPG2-202ENST00000374676 DEFA5Q01523 94 aa8.77□□□□□ -1.01
HSPG2-202ENST00000374676 ZNF616Q08AN1 781 aa8.77□□□□□ -1.01
HSPG2-202ENST00000374676 IL15RAQ13261 267 aa8.77□□□□□ -1.01
HSPG2-202ENST00000374676 EXOSC2Q13868 293 aaKnown RBP8.77□□□□□ -1.01
HSPG2-202ENST00000374676 GSG1LQ6UXU4 331 aa8.77□□□□□ -1.01
HSPG2-202ENST00000374676 WFDC9Q8NEX5 89 aa8.77□□□□□ -1.01
HSPG2-202ENST00000374676 DPF1Q92782 380 aa8.77□□□□□ -1.01
HSPG2-202ENST00000374676 EEF1AKMT3Q96AZ1 226 aa8.77□□□□□ -1.01
HSPG2-202ENST00000374676 GSKIPQ9P0R6 139 aa8.77□□□□□ -1.01
HSPG2-202ENST00000374676 MFSD2BA6NFX1 497 aa8.76□□□□□ -1.01
HSPG2-202ENST00000374676 FAM25EA8MYX2 175 aa8.76□□□□□ -1.01
HSPG2-202ENST00000374676 LINC01619G3V211 115 aa8.76□□□□□ -1.01
HSPG2-202ENST00000374676 I3L2K1 104 aa8.76□□□□□ -1.01
HSPG2-202ENST00000374676 K7EIM0 57 aa8.76□□□□□ -1.01
HSPG2-202ENST00000374676 SSNA1O43805 119 aa8.76□□□□□ -1.01
HSPG2-202ENST00000374676 PF4P02776 101 aa8.76□□□□□ -1.01
HSPG2-202ENST00000374676 FCGR2BP31994 310 aaPredicted RBP8.76□□□□□ -1.01
HSPG2-202ENST00000374676 DEFB136Q30KP8 78 aa8.76□□□□□ -1.01
HSPG2-202ENST00000374676 SLC24A4Q8NFF2 622 aa8.76□□□□□ -1.01
HSPG2-202ENST00000374676 ZNF502Q8TBZ5 544 aa8.76□□□□□ -1.01
HSPG2-202ENST00000374676 SCARB1Q8WTV0 552 aa8.76□□□□□ -1.01
HSPG2-202ENST00000374676 MAGT1Q9H0U3 335 aa8.76□□□□□ -1.01
HSPG2-202ENST00000374676 ALG5Q9Y673 324 aa8.76□□□□□ -1.01
HSPG2-202ENST00000374676 IGHV4OR15-8A0A075B7B6 117 aa8.75□□□□□ -1.01
HSPG2-202ENST00000374676 A0A087WW49 117 aa8.75□□□□□ -1.01
HSPG2-202ENST00000374676 ANKRD34BA5PLL1 514 aa8.75□□□□□ -1.01
HSPG2-202ENST00000374676 WRBO00258 174 aa8.75□□□□□ -1.01
HSPG2-202ENST00000374676 MT-CO2P00403 227 aa8.75□□□□□ -1.01
HSPG2-202ENST00000374676 IFNA10P01566 189 aa8.75□□□□□ -1.01
HSPG2-202ENST00000374676 OR8U8P0C7N1 319 aa8.75□□□□□ -1.01
HSPG2-202ENST00000374676 ZP3P21754 424 aa8.75□□□□□ -1.01
HSPG2-202ENST00000374676 NPY1RP25929 384 aa8.75□□□□□ -1.01
HSPG2-202ENST00000374676 POLR2GP62487 172 aaKnown RBP eCLIP8.75□□□□□ -1.01
HSPG2-202ENST00000374676 RPP30P78346 268 aaKnown RBP8.75□□□□□ -1.01
HSPG2-202ENST00000374676 TREML4Q6UXN2 200 aa8.75□□□□□ -1.01
HSPG2-202ENST00000374676 LINC00482Q8N8I6 264 aa8.75□□□□□ -1.01
HSPG2-202ENST00000374676 RNASEH2CQ8TDP1 164 aaKnown RBP8.75□□□□□ -1.01
HSPG2-202ENST00000374676 TMEM170AQ8WVE7 144 aa8.75□□□□□ -1.01
HSPG2-202ENST00000374676 MISP3Q96FF7 219 aa8.75□□□□□ -1.01
HSPG2-202ENST00000374676 SMIM8Q96KF7 97 aa8.75□□□□□ -1.01
HSPG2-202ENST00000374676 CCDC140Q96MF4 163 aa8.75□□□□□ -1.01
HSPG2-202ENST00000374676 DUX3Q96PT4 197 aa8.75□□□□□ -1.01
HSPG2-202ENST00000374676 TXN2Q99757 166 aa8.75□□□□□ -1.01
HSPG2-202ENST00000374676 C21orf62Q9NYP8 219 aa8.75□□□□□ -1.01
HSPG2-202ENST00000374676 GOSR2O14653 212 aa8.74□□□□□ -1.01
HSPG2-202ENST00000374676 SIX6O95475 246 aa8.74□□□□□ -1.01
HSPG2-202ENST00000374676 TRBV12-3P01733 135 aa8.74□□□□□ -1.01
HSPG2-202ENST00000374676 MBPP02686 304 aaPredicted RBP8.74□□□□□ -1.01
HSPG2-202ENST00000374676 CLEC3BP05452 202 aa8.74□□□□□ -1.01
HSPG2-202ENST00000374676 IAPPP10997 89 aa8.74□□□□□ -1.01
HSPG2-202ENST00000374676 MFAP4P55083 255 aa8.74□□□□□ -1.01
HSPG2-202ENST00000374676 TAS2R30P59541 319 aa8.74□□□□□ -1.01
HSPG2-202ENST00000374676 CYCSP99999 105 aaKnown RBP8.74□□□□□ -1.01
HSPG2-202ENST00000374676 C11orf87Q6NUJ2 197 aa8.74□□□□□ -1.01
HSPG2-202ENST00000374676 RAB40CQ96S21 281 aa8.74□□□□□ -1.01
HSPG2-202ENST00000374676 NMES1Q9C002 83 aa8.74□□□□□ -1.01
HSPG2-202ENST00000374676 GAR1Q9NY12 217 aaKnown RBP8.74□□□□□ -1.01
HSPG2-202ENST00000374676 IGHV3-21A0A0B4J1V1 117 aa8.73□□□□□ -1.01
HSPG2-202ENST00000374676 RPS10-NUDT3A0A1W2PQS6 291 aa8.73□□□□□ -1.01
HSPG2-202ENST00000374676 C15orf62A8K5M9 175 aa8.73□□□□□ -1.01
HSPG2-202ENST00000374676 K7EPK0 472 aa8.73□□□□□ -1.01
HSPG2-202ENST00000374676 BMPR1BO00238 502 aa8.73□□□□□ -1.01
HSPG2-202ENST00000374676 GGCTO75223 188 aaKnown RBP8.73□□□□□ -1.01
HSPG2-202ENST00000374676 TMEM50AO95807 157 aa8.73□□□□□ -1.01
HSPG2-202ENST00000374676 SCGB1D2O95969 90 aa8.73□□□□□ -1.01
HSPG2-202ENST00000374676 IGHV3-23P01764 117 aa8.73□□□□□ -1.01
HSPG2-202ENST00000374676 HOXD3P31249 432 aaPredicted RBP8.73□□□□□ -1.01
HSPG2-202ENST00000374676 ARL3P36405 182 aa8.73□□□□□ -1.01
HSPG2-202ENST00000374676 GPX4P36969 197 aaPredicted RBP8.73□□□□□ -1.01
HSPG2-202ENST00000374676 NPBWR1P48145 328 aa8.73□□□□□ -1.01
HSPG2-202ENST00000374676 PAX9P55771 341 aa8.73□□□□□ -1.01
HSPG2-202ENST00000374676 RAB11AP62491 216 aa8.73□□□□□ -1.01
HSPG2-202ENST00000374676 ETFRF1Q6IPR1 90 aa8.73□□□□□ -1.01
HSPG2-202ENST00000374676 SPSB3Q6PJ21 355 aa8.73□□□□□ -1.01
HSPG2-202ENST00000374676 CLEC19AQ6UXS0 136 aa8.73□□□□□ -1.01
HSPG2-202ENST00000374676 PINX1Q96BK5 328 aaKnown RBP8.73□□□□□ -1.01
HSPG2-202ENST00000374676 BSCL2Q96G97 398 aaPredicted RBP8.73□□□□□ -1.01
HSPG2-202ENST00000374676 FNDC4Q9H6D8 234 aaPredicted RBP8.73□□□□□ -1.01
HSPG2-202ENST00000374676 PSENENQ9NZ42 101 aa8.73□□□□□ -1.01
HSPG2-202ENST00000374676 RCL1Q9Y2P8 373 aaKnown RBP8.73□□□□□ -1.01
HSPG2-202ENST00000374676 STRAPQ9Y3F4 350 aaKnown RBP8.73□□□□□ -1.01
HSPG2-202ENST00000374676 S4R3C0 116 aa8.73□□□□□ -1.01
HSPG2-202ENST00000374676 SORL1Q92673 2214 aa8.72□□□□□ -1.01
HSPG2-202ENST00000374676 PPP5D1E7EU14 171 aa8.72□□□□□ -1.01
HSPG2-202ENST00000374676 F8W735 103 aaPredicted RBP8.72□□□□□ -1.01
HSPG2-202ENST00000374676 TGOLN2O43493 480 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms