RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 S100GP29377 79 aa14.27□□□□□ -0.12
LDLRAP1-201ENST00000374338 OR1B1Q8NGR6 318 aa14.27□□□□□ -0.12
LDLRAP1-201ENST00000374338 J3QR06 171 aa14.27□□□□□ -0.13
LDLRAP1-201ENST00000374338 MT-ND6P03923 174 aa14.27□□□□□ -0.13
LDLRAP1-201ENST00000374338 GATA2P23769 480 aaPredicted RBP14.27□□□□□ -0.13
LDLRAP1-201ENST00000374338 TCL1AP56279 114 aa14.27□□□□□ -0.13
LDLRAP1-201ENST00000374338 SAMD13Q5VXD3 122 aa14.27□□□□□ -0.13
LDLRAP1-201ENST00000374338 DCHS2Q6V1P9 2916 aa14.27□□□□□ -0.13
LDLRAP1-201ENST00000374338 RAB29O14966 203 aa14.26□□□□□ -0.13
LDLRAP1-201ENST00000374338 CECR9P0C854 216 aa14.26□□□□□ -0.13
LDLRAP1-201ENST00000374338 VKORC1L1Q8N0U8 176 aa14.26□□□□□ -0.13
LDLRAP1-201ENST00000374338 TAAR6Q96RI8 345 aa14.26□□□□□ -0.13
LDLRAP1-201ENST00000374338 HES4Q9HCC6 221 aa14.26□□□□□ -0.13
LDLRAP1-201ENST00000374338 SELENOKQ9Y6D0 94 aa14.26□□□□□ -0.13
LDLRAP1-201ENST00000374338 AHRRA9YTQ3 701 aa14.26□□□□□ -0.13
LDLRAP1-201ENST00000374338 TBR1Q16650 682 aa14.26□□□□□ -0.13
LDLRAP1-201ENST00000374338 MSMPQ1L6U9 139 aa14.26□□□□□ -0.13
LDLRAP1-201ENST00000374338 WDR73Q6P4I2 378 aa14.26□□□□□ -0.13
LDLRAP1-201ENST00000374338 OR1N2Q8NGR9 330 aa14.26□□□□□ -0.13
LDLRAP1-201ENST00000374338 LRP5LA4QPB2 252 aa14.25□□□□□ -0.13
LDLRAP1-201ENST00000374338 C17orf98A8MV24 154 aa14.25□□□□□ -0.13
LDLRAP1-201ENST00000374338 GNG7O60262 68 aa14.25□□□□□ -0.13
LDLRAP1-201ENST00000374338 CA7P43166 264 aa14.25□□□□□ -0.13
LDLRAP1-201ENST00000374338 C11orf53Q8IXP5 236 aa14.25□□□□□ -0.13
LDLRAP1-201ENST00000374338 OR2Z1Q8NG97 314 aa14.25□□□□□ -0.13
LDLRAP1-201ENST00000374338 TLN1Q9Y490 2541 aaKnown RBP14.25□□□□□ -0.13
LDLRAP1-201ENST00000374338 K7EM74 188 aa14.25□□□□□ -0.13
LDLRAP1-201ENST00000374338 CD5LO43866 347 aa14.25□□□□□ -0.13
LDLRAP1-201ENST00000374338 SELENOVP59797 346 aa14.25□□□□□ -0.13
LDLRAP1-201ENST00000374338 OR13A1Q8NGR1 328 aa14.25□□□□□ -0.13
LDLRAP1-201ENST00000374338 V9GYV3 84 aa14.25□□□□□ -0.13
LDLRAP1-201ENST00000374338 CUL9Q8IWT3 2517 aa14.25□□□□□ -0.13
LDLRAP1-201ENST00000374338 RRHO14718 337 aa14.25□□□□□ -0.13
LDLRAP1-201ENST00000374338 HBZP02008 142 aa14.25□□□□□ -0.13
LDLRAP1-201ENST00000374338 SPATA12Q7Z6I5 190 aa14.25□□□□□ -0.13
LDLRAP1-201ENST00000374338 WDR31Q8NA23 367 aa14.25□□□□□ -0.13
LDLRAP1-201ENST00000374338 OR8B3Q8NGG8 313 aa14.25□□□□□ -0.13
LDLRAP1-201ENST00000374338 OR8B2Q96RD0 313 aa14.25□□□□□ -0.13
LDLRAP1-201ENST00000374338 PIGBOS1A0A0B4J2F0 54 aa14.24□□□□□ -0.13
LDLRAP1-201ENST00000374338 FAM181BA6NEQ2 426 aa14.24□□□□□ -0.13
LDLRAP1-201ENST00000374338 ARL14EPLP0DKL9 152 aa14.24□□□□□ -0.13
LDLRAP1-201ENST00000374338 ERVK11-1P61568 191 aa14.24□□□□□ -0.13
LDLRAP1-201ENST00000374338 COQ2Q96H96 371 aa14.24□□□□□ -0.13
LDLRAP1-201ENST00000374338 PEF1Q9UBV8 284 aaKnown RBP14.24□□□□□ -0.13
LDLRAP1-201ENST00000374338 LINC00869P0C866 280 aa14.24□□□□□ -0.13
LDLRAP1-201ENST00000374338 PPIAL4GP0DN37 164 aa14.24□□□□□ -0.13
LDLRAP1-201ENST00000374338 CX3CL1P78423 397 aa14.24□□□□□ -0.13
LDLRAP1-201ENST00000374338 TNXAQ16473 311 aa14.24□□□□□ -0.13
LDLRAP1-201ENST00000374338 C12orf54Q6X4T0 127 aa14.24□□□□□ -0.13
LDLRAP1-201ENST00000374338 PKIBQ9C010 78 aa14.24□□□□□ -0.13
LDLRAP1-201ENST00000374338 CLCF1Q9UBD9 225 aa14.24□□□□□ -0.13
LDLRAP1-201ENST00000374338 PSG11Q9UQ72 335 aa14.24□□□□□ -0.13
LDLRAP1-201ENST00000374338 NPY1RP25929 384 aa14.23□□□□□ -0.13
LDLRAP1-201ENST00000374338 UBE2G1P62253 170 aa14.23□□□□□ -0.13
LDLRAP1-201ENST00000374338 C5orf17Q8NAS9 161 aa14.23□□□□□ -0.13
LDLRAP1-201ENST00000374338 ZNRF1Q8ND25 227 aa14.23□□□□□ -0.13
LDLRAP1-201ENST00000374338 GAGE10A6NGK3 116 aa14.23□□□□□ -0.13
LDLRAP1-201ENST00000374338 PMS2P5A8MQ11 134 aa14.23□□□□□ -0.13
LDLRAP1-201ENST00000374338 FXYD3Q14802 87 aa14.23□□□□□ -0.13
LDLRAP1-201ENST00000374338 TMEM249Q2WGJ8 235 aa14.23□□□□□ -0.13
LDLRAP1-201ENST00000374338 Q6ZT83 130 aa14.23□□□□□ -0.13
LDLRAP1-201ENST00000374338 POLDIP2Q9Y2S7 368 aa14.23□□□□□ -0.13
LDLRAP1-201ENST00000374338 C2orf70A6NJV1 201 aa14.22□□□□□ -0.13
LDLRAP1-201ENST00000374338 SRSF7Q16629 238 aaKnown RBP eCLIP14.22□□□□□ -0.13
LDLRAP1-201ENST00000374338 DUX4L9Q6RFH8 374 aaPredicted RBP14.22□□□□□ -0.13
LDLRAP1-201ENST00000374338 DEFB108BQ8NET1 73 aa14.22□□□□□ -0.13
LDLRAP1-201ENST00000374338 TNCP24821 2201 aa14.22□□□□□ -0.13
LDLRAP1-201ENST00000374338 ATRXP46100 2492 aa14.22□□□□□ -0.13
LDLRAP1-201ENST00000374338 LINC00473A8K010 186 aa14.22□□□□□ -0.13
LDLRAP1-201ENST00000374338 BRWD1-AS2P59051 145 aa14.22□□□□□ -0.13
LDLRAP1-201ENST00000374338 WDR82Q6UXN9 313 aa14.22□□□□□ -0.13
LDLRAP1-201ENST00000374338 C22orf34Q6ZV56 151 aa14.22□□□□□ -0.13
LDLRAP1-201ENST00000374338 C18orf32Q8TCD1 76 aa14.22□□□□□ -0.13
LDLRAP1-201ENST00000374338 GALMQ96C23 342 aa14.22□□□□□ -0.13
LDLRAP1-201ENST00000374338 A0A1W2PPV4 95 aa14.21□□□□□ -0.13
LDLRAP1-201ENST00000374338 KIR3DL3Q8N743 410 aa14.21□□□□□ -0.13
LDLRAP1-201ENST00000374338 NINJ1Q92982 152 aa14.21□□□□□ -0.13
LDLRAP1-201ENST00000374338 SMPXQ9UHP9 88 aa14.21□□□□□ -0.13
LDLRAP1-201ENST00000374338 SPRY3O43610 288 aa14.21□□□□□ -0.13
LDLRAP1-201ENST00000374338 RPL31P62899 125 aaKnown RBP14.21□□□□□ -0.13
LDLRAP1-201ENST00000374338 UFSP1Q6NVU6 142 aa14.21□□□□□ -0.13
LDLRAP1-201ENST00000374338 LRRC29Q8WV35 223 aa14.21□□□□□ -0.13
LDLRAP1-201ENST00000374338 ST20Q9HBF5 79 aa14.21□□□□□ -0.13
LDLRAP1-201ENST00000374338 KCNIP1Q9NZI2 227 aa14.21□□□□□ -0.13
LDLRAP1-201ENST00000374338 YTHDF2Q9Y5A9 579 aaKnown RBP14.21□□□□□ -0.13
LDLRAP1-201ENST00000374338 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.21□□□□□ -0.14
LDLRAP1-201ENST00000374338 M0R1B8 84 aa14.21□□□□□ -0.14
LDLRAP1-201ENST00000374338 M0R2Z0 102 aa14.21□□□□□ -0.14
LDLRAP1-201ENST00000374338 HSBP1O75506 76 aa14.21□□□□□ -0.14
LDLRAP1-201ENST00000374338 Q8N7P7 452 aa14.21□□□□□ -0.14
LDLRAP1-201ENST00000374338 EAF1Q96JC9 268 aaPredicted RBP14.21□□□□□ -0.14
LDLRAP1-201ENST00000374338 TXNDC17Q9BRA2 123 aa14.21□□□□□ -0.14
LDLRAP1-201ENST00000374338 ZNF146Q15072 292 aa14.2□□□□□ -0.14
LDLRAP1-201ENST00000374338 MRPL54Q6P161 138 aaKnown RBP14.2□□□□□ -0.14
LDLRAP1-201ENST00000374338 SLC25A34Q6PIV7 304 aa14.2□□□□□ -0.14
LDLRAP1-201ENST00000374338 ZCCHC24Q8N2G6 241 aaKnown RBP14.2□□□□□ -0.14
LDLRAP1-201ENST00000374338 CD177Q8N6Q3 437 aa14.2□□□□□ -0.14
LDLRAP1-201ENST00000374338 SSMEM1Q8WWF3 244 aa14.2□□□□□ -0.14
LDLRAP1-201ENST00000374338 RAB1CQ92928 201 aa14.2□□□□□ -0.14
LDLRAP1-201ENST00000374338 CHRDL1Q9BU40 450 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms