RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 OR9G9P0C7N8 305 aa3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 FGF6P10767 208 aa3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 GGT1P19440 569 aa3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 PFN2P35080 140 aa3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 SLC18A1P54219 525 aa3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 MTPNP58546 118 aa3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 IFITM3Q01628 133 aa3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 C1DQ13901 141 aaKnown RBP3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 HERPUD1Q15011 391 aa3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 TMEM30BQ3MIR4 351 aa3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 MESTQ5EB52 335 aa3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 FAM74A1Q5RGS3 127 aa3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 IBA57Q5T440 356 aaKnown RBP3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 BCL2L15Q5TBC7 163 aa3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 SLC35E4Q6ICL7 350 aa3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 CLEC20AQ6ZU45 233 aa3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 MMGT1Q8N4V1 131 aa3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 MAPKAPK5-AS1Q8N8E1 139 aa3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 OR4S1Q8NGB4 309 aa3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 OR8B12Q8NGG6 310 aa3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 OR51A4Q8NGJ6 313 aa3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 OR2A12Q8NGT7 310 aa3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 ZNF420Q8TAQ5 688 aaPredicted RBP3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 PP6455Q8WZ26 134 aa3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 TMEM106AQ96A25 262 aa3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 TMEM230Q96A57 120 aa3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 ADAT3Q96EY9 351 aaPredicted RBP3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 C9orf85Q96MD7 179 aa3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 OR2A7Q96R45 310 aa3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 PRADC1Q9BSG0 188 aa3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 WDR13Q9H1Z4 485 aa3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 FGF22Q9HCT0 170 aa3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 OR5AC2Q9NZP5 309 aa3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 COMMD3Q9UBI1 195 aa3.96□□□□□ -1.78
ECHDC1-204ENST00000368292 ARID1AO14497 2285 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 TMED7-TICAM2A0A0A6YYA0 188 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 TRAV8-2A0A0B4J237 113 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 TRAV5A0A0B4J249 113 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 RIIAD1A6NNX1 92 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 PRAC2D3DTV9 90 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 LINC01619G3V211 115 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 J3QT63 122 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 KCNK2O95069 426 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 AIFM1O95831 613 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 PTHP01270 115 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 IGLV3-27P01718 113 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 IGHV4-39P01824 125 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 IGHMP01871 453 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 ATP5G1P05496 136 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 SOD3P08294 240 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 ZSCAN5DPP0CG00 497 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 SPNP16150 400 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 FKBP3Q00688 224 aaKnown RBP3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 MEF2BQ02080 365 aaPredicted RBP3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 ZNF92Q03936 586 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 TMEM207Q6UWW9 146 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 DGAT2L6Q6ZPD8 337 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 DEFB125Q8N687 156 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 SAMD12Q8N8I0 201 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 ZFP41Q8N8Y5 198 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 FER1L6-AS1Q8NA97 138 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 OR11G2Q8NGC1 345 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 OR4C3Q8NH37 302 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 OR10G6Q8NH81 332 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 FNDC9Q8TBE3 224 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 ZNRF4Q8WWF5 429 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 DERL3Q96Q80 235 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 GNB1LQ9BYB4 327 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 NOX3Q9HBY0 568 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 EHFQ9NZC4 300 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 VAX2Q9UIW0 290 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 ZNF256Q9Y2P7 627 aaPredicted RBP3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 ZNF257Q9Y2Q1 563 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 MED31Q9Y3C7 131 aa3.95□□□□□ -1.78
ECHDC1-204ENST00000368292 CR1P17927 2039 aa3.94□□□□□ -1.78
ECHDC1-204ENST00000368292 TMEM269A0A1B0GVZ9 245 aa3.94□□□□□ -1.78
ECHDC1-204ENST00000368292 A0A1B0GWB2 263 aa3.94□□□□□ -1.78
ECHDC1-204ENST00000368292 A0A1W2PS18 150 aa3.94□□□□□ -1.78
ECHDC1-204ENST00000368292 SHISA9B4DS77 424 aa3.94□□□□□ -1.78
ECHDC1-204ENST00000368292 B4DXG7 233 aa3.94□□□□□ -1.78
ECHDC1-204ENST00000368292 H7C1H1 209 aa3.94□□□□□ -1.78
ECHDC1-204ENST00000368292 BCL2L11O43521 198 aa3.94□□□□□ -1.78
ECHDC1-204ENST00000368292 IMPA1P29218 277 aa3.94□□□□□ -1.78
ECHDC1-204ENST00000368292 ZNF140P52738 457 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-204ENST00000368292 DEFA1P59665 94 aa3.94□□□□□ -1.78
ECHDC1-204ENST00000368292 SNRPD2P62316 118 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-204ENST00000368292 SRSF9Q13242 221 aaKnown RBP eCLIP3.94□□□□□ -1.78
ECHDC1-204ENST00000368292 ARFRP1Q13795 201 aa3.94□□□□□ -1.78
ECHDC1-204ENST00000368292 NRF1Q16656 503 aa3.94□□□□□ -1.78
ECHDC1-204ENST00000368292 Q5BKY6 102 aa3.94□□□□□ -1.78
ECHDC1-204ENST00000368292 TTC32Q5I0X7 151 aa3.94□□□□□ -1.78
ECHDC1-204ENST00000368292 ZNF506Q5JVG8 444 aa3.94□□□□□ -1.78
ECHDC1-204ENST00000368292 HRCT1Q6UXD1 115 aa3.94□□□□□ -1.78
ECHDC1-204ENST00000368292 SCGB1D4Q6XE38 83 aa3.94□□□□□ -1.78
ECHDC1-204ENST00000368292 SLC35E3Q7Z769 313 aa3.94□□□□□ -1.78
ECHDC1-204ENST00000368292 ZNF695Q8IW36 515 aa3.94□□□□□ -1.78
ECHDC1-204ENST00000368292 EXOC3-AS1Q8N2X6 119 aa3.94□□□□□ -1.78
ECHDC1-204ENST00000368292 ZNF664Q8N3J9 261 aa3.94□□□□□ -1.78
ECHDC1-204ENST00000368292 ANKRD29Q8N6D5 301 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms