RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 TMEM144Q7Z5S9 345 aa13.12□□□□□ -0.31
NUCKS1-201ENST00000367142 DDTP30046 118 aa13.12□□□□□ -0.31
NUCKS1-201ENST00000367142 CKS1BP61024 79 aa13.12□□□□□ -0.31
NUCKS1-201ENST00000367142 PLPPR1Q8TBJ4 325 aa13.12□□□□□ -0.31
NUCKS1-201ENST00000367142 CST9LQ9H4G1 147 aa13.11□□□□□ -0.31
NUCKS1-201ENST00000367142 COL18A1P39060 1754 aa13.11□□□□□ -0.31
NUCKS1-201ENST00000367142 TIMM23O14925 209 aa13.11□□□□□ -0.31
NUCKS1-201ENST00000367142 GATA2P23769 480 aaPredicted RBP13.11□□□□□ -0.31
NUCKS1-201ENST00000367142 CD24P25063 80 aa13.11□□□□□ -0.31
NUCKS1-201ENST00000367142 IGHV1-18A0A0C4DH31 117 aa13.11□□□□□ -0.31
NUCKS1-201ENST00000367142 ZNF98A6NK75 572 aa13.11□□□□□ -0.31
NUCKS1-201ENST00000367142 LYNX1G3V0Z9 82 aa13.11□□□□□ -0.31
NUCKS1-201ENST00000367142 LYNX1P0DP58 116 aa13.11□□□□□ -0.31
NUCKS1-201ENST00000367142 SMCHD1A6NHR9 2005 aa13.1□□□□□ -0.31
NUCKS1-201ENST00000367142 LAMB2P55268 1798 aa13.1□□□□□ -0.31
NUCKS1-201ENST00000367142 ATP5G3P48201 142 aa13.1□□□□□ -0.31
NUCKS1-201ENST00000367142 ORMDL2Q53FV1 153 aa13.1□□□□□ -0.31
NUCKS1-201ENST00000367142 SPOCK3Q9BQ16 436 aa13.1□□□□□ -0.31
NUCKS1-201ENST00000367142 VMO1Q7Z5L0 202 aa13.1□□□□□ -0.31
NUCKS1-201ENST00000367142 TRAV12-3A0A0B4J271 114 aa13.1□□□□□ -0.31
NUCKS1-201ENST00000367142 TYMSP04818 313 aa13.1□□□□□ -0.31
NUCKS1-201ENST00000367142 CFHR1Q03591 330 aa13.1□□□□□ -0.31
NUCKS1-201ENST00000367142 ZNF638Q14966 1978 aaKnown RBP13.1□□□□□ -0.31
NUCKS1-201ENST00000367142 IGKV1D-43A0A0B4J1Z2 117 aa13.1□□□□□ -0.31
NUCKS1-201ENST00000367142 B4DSR2 109 aa13.1□□□□□ -0.31
NUCKS1-201ENST00000367142 GNG5P63218 68 aa13.1□□□□□ -0.31
NUCKS1-201ENST00000367142 MORN2Q502X0 79 aa13.09□□□□□ -0.31
NUCKS1-201ENST00000367142 FBLIM1Q8WUP2 373 aa13.09□□□□□ -0.31
NUCKS1-201ENST00000367142 TRIP11Q15643 1979 aa13.09□□□□□ -0.31
NUCKS1-201ENST00000367142 LINC00158P58513 81 aa13.09□□□□□ -0.31
NUCKS1-201ENST00000367142 PTPRZ1P23471 2315 aaPredicted RBP13.09□□□□□ -0.31
NUCKS1-201ENST00000367142 IGHV4-39P01824 125 aa13.09□□□□□ -0.31
NUCKS1-201ENST00000367142 GNLYP22749 145 aa13.09□□□□□ -0.31
NUCKS1-201ENST00000367142 RCHY1Q96PM5 261 aa13.09□□□□□ -0.31
NUCKS1-201ENST00000367142 RGPD3A6NKT7 1758 aaPredicted RBP13.08□□□□□ -0.31
NUCKS1-201ENST00000367142 HIGD1CA8MV81 97 aa13.08□□□□□ -0.31
NUCKS1-201ENST00000367142 F8WEM9 126 aa13.08□□□□□ -0.31
NUCKS1-201ENST00000367142 TRBV6-7A0A0A0MS04 114 aa13.08□□□□□ -0.32
NUCKS1-201ENST00000367142 SIGLEC5O15389 551 aa13.08□□□□□ -0.32
NUCKS1-201ENST00000367142 IL18BPO95998 194 aa13.08□□□□□ -0.32
NUCKS1-201ENST00000367142 LINC00271P0C7V0 271 aa13.08□□□□□ -0.32
NUCKS1-201ENST00000367142 C3orf56Q8N813 242 aa13.08□□□□□ -0.32
NUCKS1-201ENST00000367142 RNF114Q9Y508 228 aa13.08□□□□□ -0.32
NUCKS1-201ENST00000367142 MORN3Q6PF18 240 aaPredicted RBP13.08□□□□□ -0.32
NUCKS1-201ENST00000367142 SPRR3Q9UBC9 169 aa13.08□□□□□ -0.32
NUCKS1-201ENST00000367142 SNAI2O43623 268 aa13.08□□□□□ -0.32
NUCKS1-201ENST00000367142 SRD5A1P18405 259 aa13.08□□□□□ -0.32
NUCKS1-201ENST00000367142 NAT1P18440 290 aa13.08□□□□□ -0.32
NUCKS1-201ENST00000367142 GFI1BQ5VTD9 330 aa13.08□□□□□ -0.32
NUCKS1-201ENST00000367142 PSG8Q9UQ74 426 aa13.08□□□□□ -0.32
NUCKS1-201ENST00000367142 CHTOPQ9Y3Y2 248 aaKnown RBP13.08□□□□□ -0.32
NUCKS1-201ENST00000367142 SCN3AQ9NY46 2000 aa13.08□□□□□ -0.32
NUCKS1-201ENST00000367142 PLNP26678 52 aa13.07□□□□□ -0.32
NUCKS1-201ENST00000367142 RNF166Q96A37 237 aaPredicted RBP13.07□□□□□ -0.32
NUCKS1-201ENST00000367142 JPT2Q9H910 190 aa13.07□□□□□ -0.32
NUCKS1-201ENST00000367142 ZNF672Q499Z4 452 aaPredicted RBP13.07□□□□□ -0.32
NUCKS1-201ENST00000367142 ZNF497Q6ZNH5 498 aa13.07□□□□□ -0.32
NUCKS1-201ENST00000367142 IMMP2LQ96T52 175 aa13.07□□□□□ -0.32
NUCKS1-201ENST00000367142 EPDR1Q9UM22 224 aa13.07□□□□□ -0.32
NUCKS1-201ENST00000367142 GGTLC3B5MD39 225 aa13.07□□□□□ -0.32
NUCKS1-201ENST00000367142 IGHV1-46P01743 117 aa13.07□□□□□ -0.32
NUCKS1-201ENST00000367142 WBP1Q96G27 269 aa13.07□□□□□ -0.32
NUCKS1-201ENST00000367142 TIMP3P35625 211 aa13.07□□□□□ -0.32
NUCKS1-201ENST00000367142 SRSF7Q16629 238 aaKnown RBP eCLIP13.07□□□□□ -0.321e-9■■□□□ 12.8
NUCKS1-201ENST00000367142 ZNF525Q8N782 197 aa13.07□□□□□ -0.32
NUCKS1-201ENST00000367142 LINC01549A6NIU2 74 aa13.07□□□□□ -0.32
NUCKS1-201ENST00000367142 PPBPP02775 128 aa13.07□□□□□ -0.32
NUCKS1-201ENST00000367142 WFDC12Q8WWY7 111 aa13.07□□□□□ -0.32
NUCKS1-201ENST00000367142 SLC25A2Q9BXI2 301 aa13.07□□□□□ -0.32
NUCKS1-201ENST00000367142 LDLRAD4O15165 306 aa13.06□□□□□ -0.32
NUCKS1-201ENST00000367142 HOXA3O43365 443 aaPredicted RBP13.06□□□□□ -0.32
NUCKS1-201ENST00000367142 CACNA1CQ13936 2221 aa13.06□□□□□ -0.32
NUCKS1-201ENST00000367142 UNQ6494/PRO21346Q6UXR6 183 aa13.06□□□□□ -0.32
NUCKS1-201ENST00000367142 TRAV2A0A0B4J234 112 aa13.06□□□□□ -0.32
NUCKS1-201ENST00000367142 PRCDQ00LT1 54 aa13.06□□□□□ -0.32
NUCKS1-201ENST00000367142 SPAG8Q99932 426 aaPredicted RBP13.06□□□□□ -0.32
NUCKS1-201ENST00000367142 MYO7AQ13402 2215 aa13.06□□□□□ -0.32
NUCKS1-201ENST00000367142 IGLV3-12A0A075B6K2 115 aa13.06□□□□□ -0.32
NUCKS1-201ENST00000367142 F2Z2F3 143 aa13.06□□□□□ -0.32
NUCKS1-201ENST00000367142 MBD3L1Q8WWY6 194 aa13.06□□□□□ -0.32
NUCKS1-201ENST00000367142 FAM90A9PA6NNJ1 464 aa13.06□□□□□ -0.32
NUCKS1-201ENST00000367142 LINC00587B1AMM8 73 aa13.06□□□□□ -0.32
NUCKS1-201ENST00000367142 DPM2O94777 84 aa13.06□□□□□ -0.32
NUCKS1-201ENST00000367142 RPL35AP18077 110 aaKnown RBP13.06□□□□□ -0.32
NUCKS1-201ENST00000367142 CTAG1AP78358 180 aa13.06□□□□□ -0.32
NUCKS1-201ENST00000367142 MINOS1Q5TGZ0 78 aa13.06□□□□□ -0.32
NUCKS1-201ENST00000367142 ZNF837Q96EG3 531 aaPredicted RBP13.06□□□□□ -0.32
NUCKS1-201ENST00000367142 MINOS1-NBL1R4GNA1 71 aa13.06□□□□□ -0.32
NUCKS1-201ENST00000367142 FOCADQ5VW36 1801 aa13.05□□□□□ -0.32
NUCKS1-201ENST00000367142 HBDP02042 147 aa13.05□□□□□ -0.32
NUCKS1-201ENST00000367142 LINC00614P0C842 121 aa13.05□□□□□ -0.32
NUCKS1-201ENST00000367142 RTBDNQ9BSG5 229 aaPredicted RBP13.05□□□□□ -0.32
NUCKS1-201ENST00000367142 C1QTNF4Q9BXJ3 329 aa13.05□□□□□ -0.32
NUCKS1-201ENST00000367142 SPCS1Q9Y6A9 102 aa13.05□□□□□ -0.32
NUCKS1-201ENST00000367142 LINC00527Q9UJ94 153 aa13.05□□□□□ -0.32
NUCKS1-201ENST00000367142 PGPEP1LA6NFU8 196 aa13.05□□□□□ -0.32
NUCKS1-201ENST00000367142 NAPSAO96009 420 aa13.05□□□□□ -0.32
NUCKS1-201ENST00000367142 ZCCHC24Q8N2G6 241 aaKnown RBP13.05□□□□□ -0.32
NUCKS1-201ENST00000367142 IGHV2-26A0A0B4J1V2 119 aa13.05□□□□□ -0.32
NUCKS1-201ENST00000367142 RPL36AP83881 106 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms