RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 CDIPTO14735 213 aa5.15□□□□□ -1.59
VPS13B-203ENST00000358544 RASL11AQ6T310 242 aa5.15□□□□□ -1.59
VPS13B-203ENST00000358544 SRSF12Q8WXF0 261 aaKnown RBP5.15□□□□□ -1.59
VPS13B-203ENST00000358544 TM4SF19Q96DZ7 209 aa5.15□□□□□ -1.59
VPS13B-203ENST00000358544 PRSS47A8MTI9 375 aa5.15□□□□□ -1.59
VPS13B-203ENST00000358544 CCL25O15444 150 aa5.15□□□□□ -1.59
VPS13B-203ENST00000358544 GPX1P07203 203 aa5.15□□□□□ -1.59
VPS13B-203ENST00000358544 TWSG1Q9GZX9 223 aa5.15□□□□□ -1.59
VPS13B-203ENST00000358544 TSSC4Q9Y5U2 329 aaPredicted RBP5.15□□□□□ -1.59
VPS13B-203ENST00000358544 C3orf80F5H4A9 247 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 K7EP13 123 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 IGLV3-21P80748 117 aaPredicted RBP5.14□□□□□ -1.59
VPS13B-203ENST00000358544 KLF17Q5JT82 389 aaPredicted RBP5.14□□□□□ -1.59
VPS13B-203ENST00000358544 PCSK4Q6UW60 755 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 BMPERQ8N8U9 685 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 RAXQ9Y2V3 346 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 NPIPB13A6NJU9 1138 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 NPIPB4C9JG80 1138 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 SYS1-DBNDD2H3BUS1 97 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 CD55P08174 381 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 UCP2P55851 309 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 ID3Q02535 119 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 FAM166AQ6J272 317 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 TANC1Q9C0D5 1861 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 SSBP2P81877 361 aaPredicted RBP5.14□□□□□ -1.59
VPS13B-203ENST00000358544 PPDPFLQ8WWR9 84 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 ELSPBP1Q96BH3 223 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 MMP17Q9ULZ9 603 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 LMO7DNF2Z398 122 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 DPM2O94777 84 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 Q0VG73 95 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 C3AR1Q16581 482 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 FADS6Q8N9I5 356 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 SGK494Q96LW2 274 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 SPANXN1Q5VSR9 72 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 J3QR06 171 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 FOXS1O43638 330 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 CD300EQ496F6 205 aaPredicted RBP5.14□□□□□ -1.59
VPS13B-203ENST00000358544 WIPI1Q5MNZ9 446 aaPredicted RBP5.14□□□□□ -1.59
VPS13B-203ENST00000358544 SCGB3A1Q96QR1 104 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 KLK15Q9H2R5 256 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 PGPA6NDG6 321 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 SPSB3Q6PJ21 355 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 LINC00114Q6XXX2 140 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 MOGAT3Q86VF5 341 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 TMEM178AQ8NBL3 297 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 DEFB127Q9H1M4 99 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.14□□□□□ -1.59
VPS13B-203ENST00000358544 TMEM8BA6NDV4 472 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 AZU1P20160 251 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 IL11P20809 199 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 RAC3P60763 192 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 TRAV2A0A0B4J234 112 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 TMEM30BQ3MIR4 351 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 J3KRW8 73 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 GCSAMQ8N6F7 178 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 ZNF385AQ96PM9 386 aaKnown RBP5.14□□□□□ -1.59
VPS13B-203ENST00000358544 MGST2Q99735 147 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 OR5AN1Q8NGI8 311 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 NABP2Q9BQ15 211 aa5.14□□□□□ -1.59
VPS13B-203ENST00000358544 PSMB11A5LHX3 300 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 IGHV4-39P01824 125 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 GNB2P62879 340 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 RPL8P62917 257 aaKnown RBP5.13□□□□□ -1.59
VPS13B-203ENST00000358544 TSKUQ8WUA8 353 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 IGHV3OR15-7A0A075B7D8 119 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 SRD5A2P31213 254 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 WDR31Q8NA23 367 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 OR4A5Q8NH83 315 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 FMC1Q96HJ9 113 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 MBNL3Q9NUK0 354 aaKnown RBP5.13□□□□□ -1.59
VPS13B-203ENST00000358544 TNFRSF1AP19438 455 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 RPL27AP46776 148 aaKnown RBP5.13□□□□□ -1.59
VPS13B-203ENST00000358544 TNFRSF19Q9NS68 423 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 NDUFA3O95167 84 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 PRSS2P07478 247 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 GNG5P63218 68 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 HCP5Q6MZN7 132 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 BCL6BQ8N143 479 aaPredicted RBP5.13□□□□□ -1.59
VPS13B-203ENST00000358544 DNASE2BQ8WZ79 361 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 GP6Q9HCN6 339 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 DLL3Q9NYJ7 618 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 COL24A1Q17RW2 1714 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 PFN1P07737 140 aaKnown RBP5.13□□□□□ -1.59
VPS13B-203ENST00000358544 CCL1P22362 96 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 ERVK11-1P61568 191 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 TMEM95Q3KNT9 176 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 GOSR1O95249 250 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 WFDC8Q8IUA0 241 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 A0A1W2PRD5 423 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 A0A1W2PRF3 423 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 A0A1W2PRM7 423 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 KLHDC3Q9BQ90 382 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 E9PQ18 207 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 HOXA3O43365 443 aaPredicted RBP5.13□□□□□ -1.59
VPS13B-203ENST00000358544 SLC25A48Q6ZT89 311 aaKnown RBP5.13□□□□□ -1.59
VPS13B-203ENST00000358544 PILRAQ9UKJ1 303 aa5.13□□□□□ -1.59
VPS13B-203ENST00000358544 KIF26AQ9ULI4 1882 aaPredicted RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms