RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 GATA2P23769 480 aaPredicted RBP10.67□□□□□ -0.7
SYNCRIP-201ENST00000355238 TRIP6Q15654 476 aaKnown RBP10.67□□□□□ -0.7
SYNCRIP-201ENST00000355238 HS3ST3B1Q9Y662 390 aa10.67□□□□□ -0.7
SYNCRIP-201ENST00000355238 RP1P56715 2156 aa10.67□□□□□ -0.7
SYNCRIP-201ENST00000355238 A0A0A6YYD4 124 aa10.66□□□□□ -0.7
SYNCRIP-201ENST00000355238 MUC21A0A0G2JKD1 596 aa10.66□□□□□ -0.7
SYNCRIP-201ENST00000355238 MUC21A0A140T8X8 626 aa10.66□□□□□ -0.7
SYNCRIP-201ENST00000355238 RBMY1BA6NDE4 496 aaKnown RBP10.66□□□□□ -0.7
SYNCRIP-201ENST00000355238 RBMY1EA6NEQ0 496 aaKnown RBP10.66□□□□□ -0.7
SYNCRIP-201ENST00000355238 RBMY1DP0C7P1 496 aaKnown RBP10.66□□□□□ -0.7
SYNCRIP-201ENST00000355238 RBMY1A1P0DJD3 496 aaKnown RBP10.66□□□□□ -0.7
SYNCRIP-201ENST00000355238 RBMY1CP0DJD4 496 aa10.66□□□□□ -0.7
SYNCRIP-201ENST00000355238 MUC21Q5SSG8 566 aa10.66□□□□□ -0.7
SYNCRIP-201ENST00000355238 OR13A1Q8NGR1 328 aa10.66□□□□□ -0.7
SYNCRIP-201ENST00000355238 ZNF815PA8K554 130 aa10.66□□□□□ -0.7
SYNCRIP-201ENST00000355238 GNG5P63218 68 aa10.66□□□□□ -0.7
SYNCRIP-201ENST00000355238 PRR32B1ATL7 298 aa10.66□□□□□ -0.7
SYNCRIP-201ENST00000355238 SFTA2Q6UW10 78 aa10.66□□□□□ -0.7
SYNCRIP-201ENST00000355238 TMEM74BQ9NUR3 256 aa10.66□□□□□ -0.7
SYNCRIP-201ENST00000355238 IGKV3D-11A0A0A0MRZ8 115 aa10.66□□□□□ -0.7
SYNCRIP-201ENST00000355238 IGKV1-9A0A0C4DH69 117 aa10.66□□□□□ -0.7
SYNCRIP-201ENST00000355238 FAM90A1Q86YD7 464 aa10.66□□□□□ -0.7
SYNCRIP-201ENST00000355238 CHTOPQ9Y3Y2 248 aaKnown RBP10.66□□□□□ -0.7
SYNCRIP-201ENST00000355238 OTOFQ9HC10 1997 aa10.66□□□□□ -0.7
SYNCRIP-201ENST00000355238 SNRPD3P62318 126 aaKnown RBP10.66□□□□□ -0.7
SYNCRIP-201ENST00000355238 BCL6BQ8N143 479 aaPredicted RBP10.66□□□□□ -0.7
SYNCRIP-201ENST00000355238 DOCK5Q9H7D0 1870 aa10.66□□□□□ -0.7
SYNCRIP-201ENST00000355238 MESP2Q0VG99 397 aa10.65□□□□□ -0.7
SYNCRIP-201ENST00000355238 GP6Q9HCN6 339 aa10.65□□□□□ -0.7
SYNCRIP-201ENST00000355238 CRIM1Q9NZV1 1036 aa10.65□□□□□ -0.7
SYNCRIP-201ENST00000355238 UPK2O00526 184 aa10.65□□□□□ -0.7
SYNCRIP-201ENST00000355238 KIR3DL3Q8N743 410 aa10.65□□□□□ -0.7
SYNCRIP-201ENST00000355238 ZNRF1Q8ND25 227 aa10.65□□□□□ -0.7
SYNCRIP-201ENST00000355238 FGF11Q92914 225 aa10.65□□□□□ -0.7
SYNCRIP-201ENST00000355238 MCM3APO60318 1980 aa10.65□□□□□ -0.7
SYNCRIP-201ENST00000355238 TRBV7-9A0A0J9YWB2 115 aa10.65□□□□□ -0.7
SYNCRIP-201ENST00000355238 SSBP2P81877 361 aaPredicted RBP10.65□□□□□ -0.7
SYNCRIP-201ENST00000355238 TMEM101Q96IK0 257 aa10.65□□□□□ -0.7
SYNCRIP-201ENST00000355238 DEPPQ9NTK1 212 aa10.65□□□□□ -0.7
SYNCRIP-201ENST00000355238 PAX1P15863 534 aa10.65□□□□□ -0.7
SYNCRIP-201ENST00000355238 PLNP26678 52 aa10.65□□□□□ -0.7
SYNCRIP-201ENST00000355238 SLC25A48Q6ZT89 311 aaKnown RBP10.65□□□□□ -0.7
SYNCRIP-201ENST00000355238 C1orf210Q8IVY1 113 aa10.65□□□□□ -0.7
SYNCRIP-201ENST00000355238 COX6A1P12074 109 aa10.65□□□□□ -0.71
SYNCRIP-201ENST00000355238 CNTFRP26992 372 aa10.65□□□□□ -0.71
SYNCRIP-201ENST00000355238 KNTC1P50748 2209 aa10.64□□□□□ -0.71
SYNCRIP-201ENST00000355238 GHRHP01286 108 aa10.64□□□□□ -0.71
SYNCRIP-201ENST00000355238 ATXN8Q156A1 80 aa10.64□□□□□ -0.71
SYNCRIP-201ENST00000355238 OCIAD2Q56VL3 154 aa10.64□□□□□ -0.71
SYNCRIP-201ENST00000355238 FOXA2Q9Y261 457 aaPredicted RBP10.64□□□□□ -0.71
SYNCRIP-201ENST00000355238 ANKRD36A6QL64 1941 aa10.64□□□□□ -0.71
SYNCRIP-201ENST00000355238 TRAV5A0A0B4J249 113 aa10.64□□□□□ -0.71
SYNCRIP-201ENST00000355238 A0A0G2JMM0 328 aa10.64□□□□□ -0.71
SYNCRIP-201ENST00000355238 A0A1W2PPB8 328 aa10.64□□□□□ -0.71
SYNCRIP-201ENST00000355238 TCRBV4S1A1TA0A5B7 111 aa10.64□□□□□ -0.71
SYNCRIP-201ENST00000355238 KIR3DP1A8MWS1 328 aa10.64□□□□□ -0.71
SYNCRIP-201ENST00000355238 CTSBP07858 339 aa10.64□□□□□ -0.71
SYNCRIP-201ENST00000355238 PCOLCEQ15113 449 aa10.64□□□□□ -0.71
SYNCRIP-201ENST00000355238 GUSBP1Q15486 140 aa10.64□□□□□ -0.71
SYNCRIP-201ENST00000355238 ERG28Q9UKR5 140 aa10.64□□□□□ -0.71
SYNCRIP-201ENST00000355238 ZNF638Q14966 1978 aaKnown RBP10.64□□□□□ -0.71
SYNCRIP-201ENST00000355238 YPEL1O60688 119 aa10.64□□□□□ -0.71
SYNCRIP-201ENST00000355238 RNF182Q8N6D2 247 aa10.64□□□□□ -0.71
SYNCRIP-201ENST00000355238 DEFB124Q8NES8 71 aa10.64□□□□□ -0.71
SYNCRIP-201ENST00000355238 YPEL2Q96QA6 119 aa10.64□□□□□ -0.71
SYNCRIP-201ENST00000355238 A0A087WV48 116 aa10.64□□□□□ -0.71
SYNCRIP-201ENST00000355238 SRSF6Q13247 344 aaKnown RBP10.64□□□□□ -0.71
SYNCRIP-201ENST00000355238 DLX4Q92988 240 aaPredicted RBP10.64□□□□□ -0.71
SYNCRIP-201ENST00000355238 ITGB1BP1O14713 200 aa10.63□□□□□ -0.71
SYNCRIP-201ENST00000355238 GAGE1Q13065 139 aa10.63□□□□□ -0.71
SYNCRIP-201ENST00000355238 IGKV1D-8A0A087WSZ0 117 aa10.63□□□□□ -0.71
SYNCRIP-201ENST00000355238 A0A087X0K7 114 aa10.63□□□□□ -0.71
SYNCRIP-201ENST00000355238 PSMB11A5LHX3 300 aa10.63□□□□□ -0.71
SYNCRIP-201ENST00000355238 ZNF497Q6ZNH5 498 aa10.63□□□□□ -0.71
SYNCRIP-201ENST00000355238 SNHG12Q9BXW3 62 aa10.63□□□□□ -0.71
SYNCRIP-201ENST00000355238 CST9LQ9H4G1 147 aa10.63□□□□□ -0.71
SYNCRIP-201ENST00000355238 C21orf62Q9NYP8 219 aa10.63□□□□□ -0.71
SYNCRIP-201ENST00000355238 PSG8Q9UQ74 426 aa10.63□□□□□ -0.71
SYNCRIP-201ENST00000355238 TMPRSS3P57727 454 aa10.63□□□□□ -0.71
SYNCRIP-201ENST00000355238 TFF2Q03403 129 aa10.63□□□□□ -0.71
SYNCRIP-201ENST00000355238 KIR3DS1Q14943 382 aa10.63□□□□□ -0.71
SYNCRIP-201ENST00000355238 POLR3KQ9Y2Y1 108 aaPredicted RBP10.63□□□□□ -0.71
SYNCRIP-201ENST00000355238 F2Z2F3 143 aa10.63□□□□□ -0.71
SYNCRIP-201ENST00000355238 SYS1-DBNDD2H3BUS1 97 aa10.63□□□□□ -0.71
SYNCRIP-201ENST00000355238 PVRIGQ6DKI7 326 aa10.63□□□□□ -0.71
SYNCRIP-201ENST00000355238 hDV102S1A0JD36 115 aa10.62□□□□□ -0.71
SYNCRIP-201ENST00000355238 IFI27P40305 119 aaPredicted RBP10.62□□□□□ -0.71
SYNCRIP-201ENST00000355238 CD69Q07108 199 aa10.62□□□□□ -0.71
SYNCRIP-201ENST00000355238 RSPO4Q2I0M5 234 aaPredicted RBP10.62□□□□□ -0.71
SYNCRIP-201ENST00000355238 TMEM249Q2WGJ8 235 aa10.62□□□□□ -0.71
SYNCRIP-201ENST00000355238 RPP25LQ8N5L8 163 aaKnown RBP10.62□□□□□ -0.71
SYNCRIP-201ENST00000355238 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.62□□□□□ -0.71
SYNCRIP-201ENST00000355238 RPRMLQ8N4K4 120 aa10.62□□□□□ -0.71
SYNCRIP-201ENST00000355238 LYZL4Q96KX0 146 aa10.62□□□□□ -0.71
SYNCRIP-201ENST00000355238 MAP1BP46821 2468 aaKnown RBP10.62□□□□□ -0.71
SYNCRIP-201ENST00000355238 SCN8AQ9UQD0 1980 aa10.62□□□□□ -0.71
SYNCRIP-201ENST00000355238 NAA38Q9BRA0 125 aaKnown RBP10.62□□□□□ -0.71
SYNCRIP-201ENST00000355238 TRAV2A0A0B4J234 112 aa10.62□□□□□ -0.71
SYNCRIP-201ENST00000355238 PYYP10082 97 aa10.62□□□□□ -0.71
SYNCRIP-201ENST00000355238 TREML4Q6UXN2 200 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms