RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 OR2F1Q13607 317 aa21.19■□□□□ 0.98
SSBP4-202ENST00000348495 ARSJQ5FYB0 599 aaPredicted RBP21.19■□□□□ 0.98
SSBP4-202ENST00000348495 LAMTOR1Q6IAA8 161 aa21.19■□□□□ 0.98
SSBP4-202ENST00000348495 C9orf62Q8N4C0 152 aa21.19■□□□□ 0.98
SSBP4-202ENST00000348495 OR1L6Q8NGR2 347 aa21.19■□□□□ 0.98
SSBP4-202ENST00000348495 OR2T6Q8NHC8 308 aa21.19■□□□□ 0.98
SSBP4-202ENST00000348495 FANCD2OSQ96PS1 177 aa21.19■□□□□ 0.98
SSBP4-202ENST00000348495 IGLV11-55A0A075B6I3 123 aa21.18■□□□□ 0.98
SSBP4-202ENST00000348495 PRH1P02810 166 aa21.18■□□□□ 0.98
SSBP4-202ENST00000348495 IFNA4P05014 189 aa21.18■□□□□ 0.98
SSBP4-202ENST00000348495 DEFA4P12838 97 aa21.18■□□□□ 0.98
SSBP4-202ENST00000348495 RNASEH2CQ8TDP1 164 aaKnown RBP21.18■□□□□ 0.98
SSBP4-202ENST00000348495 C16orf95Q9H693 158 aa21.18■□□□□ 0.98
SSBP4-202ENST00000348495 AP2S1P53680 142 aaPredicted RBP21.18■□□□□ 0.98
SSBP4-202ENST00000348495 OR8G2PQ6IF36 304 aa21.18■□□□□ 0.98
SSBP4-202ENST00000348495 KCNRGQ8N5I3 272 aa21.18■□□□□ 0.98
SSBP4-202ENST00000348495 NDUFA7O95182 113 aa21.17■□□□□ 0.98
SSBP4-202ENST00000348495 BRI3O95415 125 aa21.17■□□□□ 0.98
SSBP4-202ENST00000348495 SRSF2Q01130 221 aaKnown RBP21.17■□□□□ 0.98
SSBP4-202ENST00000348495 TMEM217Q8N7C4 229 aa21.17■□□□□ 0.98
SSBP4-202ENST00000348495 GON7Q9BXV9 100 aa21.17■□□□□ 0.98
SSBP4-202ENST00000348495 ZC4H2Q9NQZ6 224 aa21.17■□□□□ 0.98
SSBP4-202ENST00000348495 SCAF4O95104 1147 aaKnown RBP21.16■□□□□ 0.98
SSBP4-202ENST00000348495 IGLV1-40P01703 118 aa21.16■□□□□ 0.98
SSBP4-202ENST00000348495 SLC25A24Q6NUK1 477 aa21.16■□□□□ 0.98
SSBP4-202ENST00000348495 OR10P1Q8NGE3 313 aa21.16■□□□□ 0.98
SSBP4-202ENST00000348495 TRBV9A0A0B4J1U6 114 aa21.15■□□□□ 0.98
SSBP4-202ENST00000348495 A0A0D9SG52 128 aa21.15■□□□□ 0.98
SSBP4-202ENST00000348495 CORTO00230 105 aa21.15■□□□□ 0.98
SSBP4-202ENST00000348495 OR5C1Q8NGR4 320 aa21.15■□□□□ 0.98
SSBP4-202ENST00000348495 FNDC4Q9H6D8 234 aaPredicted RBP21.15■□□□□ 0.98
SSBP4-202ENST00000348495 H3BUA1 57 aa21.14■□□□□ 0.97
SSBP4-202ENST00000348495 IGHG4P01861 327 aa21.14■□□□□ 0.97
SSBP4-202ENST00000348495 S100A11P31949 105 aa21.14■□□□□ 0.97
SSBP4-202ENST00000348495 HBG1P69891 147 aa21.14■□□□□ 0.97
SSBP4-202ENST00000348495 HBG2P69892 147 aa21.14■□□□□ 0.97
SSBP4-202ENST00000348495 PINX1Q96BK5 328 aaKnown RBP21.14■□□□□ 0.97
SSBP4-202ENST00000348495 MISP3Q96FF7 219 aa21.14■□□□□ 0.97
SSBP4-202ENST00000348495 CYB5BO43169 146 aa21.13■□□□□ 0.97
SSBP4-202ENST00000348495 HIST1H1BP16401 226 aaKnown RBP21.13■□□□□ 0.97
SSBP4-202ENST00000348495 CD69Q07108 199 aa21.13■□□□□ 0.97
SSBP4-202ENST00000348495 SLC38A11Q08AI6 406 aa21.13■□□□□ 0.97
SSBP4-202ENST00000348495 LINC01006Q8NI28 216 aa21.13■□□□□ 0.97
SSBP4-202ENST00000348495 FBXL17Q9UF56 701 aa21.13■□□□□ 0.97
SSBP4-202ENST00000348495 C2CD3Q4AC94 2353 aa21.13■□□□□ 0.97
SSBP4-202ENST00000348495 I3L2K1 104 aa21.12■□□□□ 0.97
SSBP4-202ENST00000348495 EXOSC2Q13868 293 aaKnown RBP21.12■□□□□ 0.97
SSBP4-202ENST00000348495 TMUB2Q71RG4 321 aa21.12■□□□□ 0.97
SSBP4-202ENST00000348495 ZNF329Q86UD4 541 aa21.12■□□□□ 0.97
SSBP4-202ENST00000348495 OR1S2Q8NGQ3 325 aa21.12■□□□□ 0.97
SSBP4-202ENST00000348495 JMJD1CQ15652 2540 aa21.12■□□□□ 0.97
SSBP4-202ENST00000348495 K7EIM0 57 aa21.12■□□□□ 0.97
SSBP4-202ENST00000348495 GPX4P36969 197 aaPredicted RBP21.12■□□□□ 0.97
SSBP4-202ENST00000348495 CACNG8Q8WXS5 425 aa21.12■□□□□ 0.97
SSBP4-202ENST00000348495 GGACTQ9BVM4 153 aa21.12■□□□□ 0.97
SSBP4-202ENST00000348495 SMIM3Q9BZL3 60 aa21.12■□□□□ 0.97
SSBP4-202ENST00000348495 ZNF355PQ9NSJ1 428 aa21.12■□□□□ 0.97
SSBP4-202ENST00000348495 TMEM89A2RUT3 159 aa21.11■□□□□ 0.97
SSBP4-202ENST00000348495 PSMB11A5LHX3 300 aa21.11■□□□□ 0.97
SSBP4-202ENST00000348495 OPRK1P41145 380 aa21.11■□□□□ 0.97
SSBP4-202ENST00000348495 DLK1P80370 383 aa21.11■□□□□ 0.97
SSBP4-202ENST00000348495 MLANAQ16655 118 aa21.11■□□□□ 0.97
SSBP4-202ENST00000348495 C10orf99Q6UWK7 81 aa21.11■□□□□ 0.97
SSBP4-202ENST00000348495 ARL6Q9H0F7 186 aa21.11■□□□□ 0.97
SSBP4-202ENST00000348495 WFDC1Q9HC57 220 aa21.11■□□□□ 0.97
SSBP4-202ENST00000348495 THYN1Q9P016 225 aa21.11■□□□□ 0.97
SSBP4-202ENST00000348495 OR2J3O76001 311 aa21.1■□□□□ 0.97
SSBP4-202ENST00000348495 NDUFB8O95169 186 aa21.1■□□□□ 0.97
SSBP4-202ENST00000348495 MT-CO2P00403 227 aa21.1■□□□□ 0.97
SSBP4-202ENST00000348495 PSMB8P28062 276 aa21.1■□□□□ 0.97
SSBP4-202ENST00000348495 SLC35B1P78383 322 aa21.1■□□□□ 0.97
SSBP4-202ENST00000348495 RHOGP84095 191 aa21.1■□□□□ 0.97
SSBP4-202ENST00000348495 CLINT1Q14677 625 aa21.1■□□□□ 0.97
SSBP4-202ENST00000348495 VWC2Q2TAL6 325 aa21.1■□□□□ 0.97
SSBP4-202ENST00000348495 NECAP1Q8NC96 275 aa21.1■□□□□ 0.97
SSBP4-202ENST00000348495 WIPF2Q8TF74 440 aaPredicted RBP21.1■□□□□ 0.97
SSBP4-202ENST00000348495 MS4A10Q96PG2 267 aa21.1■□□□□ 0.97
SSBP4-202ENST00000348495 ATP6V1FQ16864 119 aa21.09■□□□□ 0.97
SSBP4-202ENST00000348495 SLC16A13Q7RTY0 426 aa21.09■□□□□ 0.97
SSBP4-202ENST00000348495 KLK15Q9H2R5 256 aa21.09■□□□□ 0.97
SSBP4-202ENST00000348495 SLA2Q9H6Q3 261 aa21.09■□□□□ 0.97
SSBP4-202ENST00000348495 FBXL7Q9UJT9 491 aa21.09■□□□□ 0.97
SSBP4-202ENST00000348495 FNDC10F2Z333 226 aa21.09■□□□□ 0.97
SSBP4-202ENST00000348495 LILRB2Q8N423 598 aa21.09■□□□□ 0.97
SSBP4-202ENST00000348495 OR4F5Q8NH21 305 aa21.09■□□□□ 0.97
SSBP4-202ENST00000348495 ARPC5LQ9BPX5 153 aa21.09■□□□□ 0.97
SSBP4-202ENST00000348495 TAAR5O14804 337 aa21.08■□□□□ 0.97
SSBP4-202ENST00000348495 BCL2L11O43521 198 aa21.08■□□□□ 0.97
SSBP4-202ENST00000348495 DEFA5Q01523 94 aa21.08■□□□□ 0.97
SSBP4-202ENST00000348495 ETFRF1Q6IPR1 90 aa21.08■□□□□ 0.97
SSBP4-202ENST00000348495 TEX38Q6PEX7 206 aa21.08■□□□□ 0.97
SSBP4-202ENST00000348495 CENPVQ7Z7K6 275 aaPredicted RBP21.08■□□□□ 0.97
SSBP4-202ENST00000348495 ATP5SQ99766 215 aa21.08■□□□□ 0.97
SSBP4-202ENST00000348495 TMEM147Q9BVK8 224 aa21.08■□□□□ 0.97
SSBP4-202ENST00000348495 CYTL1Q9NRR1 136 aa21.08■□□□□ 0.97
SSBP4-202ENST00000348495 BOLA1Q9Y3E2 137 aa21.08■□□□□ 0.97
SSBP4-202ENST00000348495 RPS10-NUDT3A0A1W2PQS6 291 aa21.07■□□□□ 0.96
SSBP4-202ENST00000348495 TRGV3P03979 118 aa21.07■□□□□ 0.96
SSBP4-202ENST00000348495 PF4V1P10720 104 aa21.07■□□□□ 0.96
SSBP4-202ENST00000348495 FOXE3Q13461 319 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms