RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 SIGLEC8Q9NYZ4 499 aa8.66□□□□□ -1.02
SLC28A1-202ENST00000338602 S4R3C0 116 aa8.66□□□□□ -1.02
SLC28A1-202ENST00000338602 A0A0B4J2A0 478 aa8.65□□□□□ -1.02
SLC28A1-202ENST00000338602 FAM240BA0A1B0GVZ2 78 aa8.65□□□□□ -1.02
SLC28A1-202ENST00000338602 ZNF320A2RRD8 509 aa8.65□□□□□ -1.02
SLC28A1-202ENST00000338602 INS-IGF2F8WCM5 200 aa8.65□□□□□ -1.02
SLC28A1-202ENST00000338602 LGALS9O00182 355 aa8.65□□□□□ -1.02
SLC28A1-202ENST00000338602 CORTO00230 105 aa8.65□□□□□ -1.02
SLC28A1-202ENST00000338602 SULT1A3P0DMM9 295 aa8.65□□□□□ -1.02
SLC28A1-202ENST00000338602 SULT1A4P0DMN0 295 aa8.65□□□□□ -1.02
SLC28A1-202ENST00000338602 VAMP1P23763 118 aa8.65□□□□□ -1.02
SLC28A1-202ENST00000338602 GPR183P32249 361 aa8.65□□□□□ -1.02
SLC28A1-202ENST00000338602 BTCP35070 178 aa8.65□□□□□ -1.02
SLC28A1-202ENST00000338602 MFAP4P55083 255 aa8.65□□□□□ -1.02
SLC28A1-202ENST00000338602 UBE2MP61081 183 aaKnown RBP8.65□□□□□ -1.02
SLC28A1-202ENST00000338602 Q56UQ5 140 aa8.65□□□□□ -1.02
SLC28A1-202ENST00000338602 SPINK9Q5DT21 86 aa8.65□□□□□ -1.02
SLC28A1-202ENST00000338602 SPSB3Q6PJ21 355 aa8.65□□□□□ -1.02
SLC28A1-202ENST00000338602 LHFPL5Q8TAF8 219 aa8.65□□□□□ -1.02
SLC28A1-202ENST00000338602 ENKURQ8TC29 256 aa8.65□□□□□ -1.02
SLC28A1-202ENST00000338602 DYNLRB2Q8TF09 96 aa8.65□□□□□ -1.02
SLC28A1-202ENST00000338602 GPR146Q96CH1 333 aa8.65□□□□□ -1.02
SLC28A1-202ENST00000338602 BSCL2Q96G97 398 aaPredicted RBP8.65□□□□□ -1.02
SLC28A1-202ENST00000338602 CACNG5Q9UF02 275 aa8.65□□□□□ -1.02
SLC28A1-202ENST00000338602 SHPKQ9UHJ6 478 aa8.65□□□□□ -1.02
SLC28A1-202ENST00000338602 DMRT1Q9Y5R6 373 aa8.65□□□□□ -1.02
SLC28A1-202ENST00000338602 DUXBA0A1W2PPF3 345 aa8.64□□□□□ -1.03
SLC28A1-202ENST00000338602 IGLV1-51P01701 117 aa8.64□□□□□ -1.03
SLC28A1-202ENST00000338602 HLA-AP01891 365 aaKnown RBP8.64□□□□□ -1.03
SLC28A1-202ENST00000338602 CCR6P51684 374 aa8.64□□□□□ -1.03
SLC28A1-202ENST00000338602 NOXA1Q86UR1 476 aa8.64□□□□□ -1.03
SLC28A1-202ENST00000338602 UBAC2Q8NBM4 344 aa8.64□□□□□ -1.03
SLC28A1-202ENST00000338602 DUSP18Q8NEJ0 188 aa8.64□□□□□ -1.03
SLC28A1-202ENST00000338602 OR2K2Q8NGT1 345 aa8.64□□□□□ -1.03
SLC28A1-202ENST00000338602 SCARB1Q8WTV0 552 aa8.64□□□□□ -1.03
SLC28A1-202ENST00000338602 PINX1Q96BK5 328 aaKnown RBP8.64□□□□□ -1.03
SLC28A1-202ENST00000338602 PRR25Q96S07 402 aa8.64□□□□□ -1.03
SLC28A1-202ENST00000338602 TXN2Q99757 166 aa8.64□□□□□ -1.03
SLC28A1-202ENST00000338602 HIPK2Q9H2X6 1198 aa8.64□□□□□ -1.03
SLC28A1-202ENST00000338602 HEYLQ9NQ87 328 aaPredicted RBP8.64□□□□□ -1.03
SLC28A1-202ENST00000338602 UFC1Q9Y3C8 167 aa8.64□□□□□ -1.03
SLC28A1-202ENST00000338602 IGHV3-21A0A0B4J1V1 117 aa8.63□□□□□ -1.03
SLC28A1-202ENST00000338602 A0A0G2JRQ6 117 aa8.63□□□□□ -1.03
SLC28A1-202ENST00000338602 OR2T8A6NH00 312 aa8.63□□□□□ -1.03
SLC28A1-202ENST00000338602 CEBPZOSA8MTT3 80 aa8.63□□□□□ -1.03
SLC28A1-202ENST00000338602 K7EIM0 57 aa8.63□□□□□ -1.03
SLC28A1-202ENST00000338602 NUPL2O15504 423 aaKnown RBP8.63□□□□□ -1.03
SLC28A1-202ENST00000338602 TGOLN2O43493 480 aa8.63□□□□□ -1.03
SLC28A1-202ENST00000338602 SCGB2A1O75556 95 aa8.63□□□□□ -1.03
SLC28A1-202ENST00000338602 CSN3P07498 182 aa8.63□□□□□ -1.03
SLC28A1-202ENST00000338602 GP9P14770 177 aa8.63□□□□□ -1.03
SLC28A1-202ENST00000338602 HTR2BP41595 481 aa8.63□□□□□ -1.03
SLC28A1-202ENST00000338602 NPBWR1P48145 328 aa8.63□□□□□ -1.03
SLC28A1-202ENST00000338602 MFAP2P55001 183 aa8.63□□□□□ -1.03
SLC28A1-202ENST00000338602 SUPT4H1P63272 117 aaKnown RBP8.63□□□□□ -1.03
SLC28A1-202ENST00000338602 SMCO1Q147U7 214 aa8.63□□□□□ -1.03
SLC28A1-202ENST00000338602 AARDQ4LEZ3 155 aa8.63□□□□□ -1.03
SLC28A1-202ENST00000338602 LCN12Q6JVE5 192 aa8.63□□□□□ -1.03
SLC28A1-202ENST00000338602 Q6ZRM9 215 aa8.63□□□□□ -1.03
SLC28A1-202ENST00000338602 LYZL2Q7Z4W2 148 aa8.63□□□□□ -1.03
SLC28A1-202ENST00000338602 MARC2Q969Z3 335 aa8.63□□□□□ -1.03
SLC28A1-202ENST00000338602 SORL1Q92673 2214 aa8.62□□□□□ -1.03
SLC28A1-202ENST00000338602 A0A1B0GU03 582 aa8.62□□□□□ -1.03
SLC28A1-202ENST00000338602 NDUFB6O95139 128 aa8.62□□□□□ -1.03
SLC28A1-202ENST00000338602 SFT2D2O95562 160 aa8.62□□□□□ -1.03
SLC28A1-202ENST00000338602 MT-CO2P00403 227 aa8.62□□□□□ -1.03
SLC28A1-202ENST00000338602 ELLP55199 621 aaPredicted RBP8.62□□□□□ -1.03
SLC28A1-202ENST00000338602 RELQ04864 619 aaPredicted RBP8.62□□□□□ -1.03
SLC28A1-202ENST00000338602 IL34Q6ZMJ4 242 aa8.62□□□□□ -1.03
SLC28A1-202ENST00000338602 OR1S1Q8NH92 325 aa8.62□□□□□ -1.03
SLC28A1-202ENST00000338602 ZC4H2Q9NQZ6 224 aa8.62□□□□□ -1.03
SLC28A1-202ENST00000338602 TECRQ9NZ01 308 aaKnown RBP8.62□□□□□ -1.03
SLC28A1-202ENST00000338602 PRR13Q9NZ81 148 aa8.62□□□□□ -1.03
SLC28A1-202ENST00000338602 SMAD5-AS1Q9Y6J3 95 aa8.62□□□□□ -1.03
SLC28A1-202ENST00000338602 RPS10-NUDT3A0A1W2PQS6 291 aa8.61□□□□□ -1.03
SLC28A1-202ENST00000338602 C2orf70A6NJV1 201 aa8.61□□□□□ -1.03
SLC28A1-202ENST00000338602 I3L2K1 104 aa8.61□□□□□ -1.03
SLC28A1-202ENST00000338602 NDUFA4O00483 81 aa8.61□□□□□ -1.03
SLC28A1-202ENST00000338602 GNG7O60262 68 aa8.61□□□□□ -1.03
SLC28A1-202ENST00000338602 TCRBP04435 133 aa8.61□□□□□ -1.03
SLC28A1-202ENST00000338602 FOLR2P14207 255 aa8.61□□□□□ -1.03
SLC28A1-202ENST00000338602 CBLN1P23435 193 aa8.61□□□□□ -1.03
SLC28A1-202ENST00000338602 FCGR2BP31994 310 aaPredicted RBP8.61□□□□□ -1.03
SLC28A1-202ENST00000338602 CD69Q07108 199 aa8.61□□□□□ -1.03
SLC28A1-202ENST00000338602 NMSQ5H8A3 153 aa8.61□□□□□ -1.03
SLC28A1-202ENST00000338602 HAPLN4Q86UW8 402 aa8.61□□□□□ -1.03
SLC28A1-202ENST00000338602 LRTM2Q8N967 370 aa8.61□□□□□ -1.03
SLC28A1-202ENST00000338602 COQ8AQ8NI60 647 aa8.61□□□□□ -1.03
SLC28A1-202ENST00000338602 ZNF436Q9C0F3 470 aaPredicted RBP8.61□□□□□ -1.03
SLC28A1-202ENST00000338602 TMED3Q9Y3Q3 217 aa8.61□□□□□ -1.03
SLC28A1-202ENST00000338602 A8MWP6 167 aa8.61□□□□□ -1.03
SLC28A1-202ENST00000338602 INMT-MINDY4F8WBC2 141 aa8.61□□□□□ -1.03
SLC28A1-202ENST00000338602 RNASE2P10153 161 aaKnown RBP8.61□□□□□ -1.03
SLC28A1-202ENST00000338602 SLC25A6P12236 298 aa8.61□□□□□ -1.03
SLC28A1-202ENST00000338602 OPRK1P41145 380 aa8.61□□□□□ -1.03
SLC28A1-202ENST00000338602 TNFRSF9Q07011 255 aa8.61□□□□□ -1.03
SLC28A1-202ENST00000338602 PPP1R1AQ13522 171 aa8.61□□□□□ -1.03
SLC28A1-202ENST00000338602 C4orf46Q504U0 113 aa8.61□□□□□ -1.03
SLC28A1-202ENST00000338602 GTSCR1Q86UQ5 136 aa8.61□□□□□ -1.03
SLC28A1-202ENST00000338602 SLC24A4Q8NFF2 622 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms