RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 TEX45Q8NA69 505 aa14.24□□□□□ -0.13
TRAPPC11-201ENST00000334690 IMMP2LQ96T52 175 aa14.24□□□□□ -0.13
TRAPPC11-201ENST00000334690 NPIPB6E9PJ23 425 aa14.24□□□□□ -0.13
TRAPPC11-201ENST00000334690 RNF224P0DH78 156 aa14.24□□□□□ -0.13
TRAPPC11-201ENST00000334690 TEX29Q8N6K0 151 aa14.24□□□□□ -0.13
TRAPPC11-201ENST00000334690 REG4Q9BYZ8 158 aa14.24□□□□□ -0.13
TRAPPC11-201ENST00000334690 TRBV6-6A0A0A6YYG2 114 aa14.24□□□□□ -0.13
TRAPPC11-201ENST00000334690 TMEM136Q6ZRR5 245 aa14.24□□□□□ -0.13
TRAPPC11-201ENST00000334690 FMC1Q96HJ9 113 aa14.24□□□□□ -0.13
TRAPPC11-201ENST00000334690 TBL2Q9Y4P3 447 aaKnown RBP14.24□□□□□ -0.13
TRAPPC11-201ENST00000334690 A0A1B0GW64 132 aa14.24□□□□□ -0.13
TRAPPC11-201ENST00000334690 GFRA3O60609 400 aa14.24□□□□□ -0.13
TRAPPC11-201ENST00000334690 NUDT3O95989 172 aa14.24□□□□□ -0.13
TRAPPC11-201ENST00000334690 BMPERQ8N8U9 685 aa14.24□□□□□ -0.13
TRAPPC11-201ENST00000334690 TRBV24-1A0A075B6N3 115 aa14.23□□□□□ -0.13
TRAPPC11-201ENST00000334690 C1QTNF9BB2RNN3 333 aa14.23□□□□□ -0.13
TRAPPC11-201ENST00000334690 GPX1P07203 203 aa14.23□□□□□ -0.13
TRAPPC11-201ENST00000334690 HEPN1Q6WQI6 88 aa14.23□□□□□ -0.13
TRAPPC11-201ENST00000334690 Q6ZS49 121 aa14.23□□□□□ -0.13
TRAPPC11-201ENST00000334690 CIARTQ8N365 385 aaPredicted RBP14.23□□□□□ -0.13
TRAPPC11-201ENST00000334690 RPP21Q9H633 154 aaKnown RBP14.23□□□□□ -0.13
TRAPPC11-201ENST00000334690 FER1L5A0AVI2 2057 aa14.23□□□□□ -0.13
TRAPPC11-201ENST00000334690 IL18BPO95998 194 aa14.23□□□□□ -0.13
TRAPPC11-201ENST00000334690 FOXF2Q12947 444 aa14.23□□□□□ -0.13
TRAPPC11-201ENST00000334690 ERASQ7Z444 233 aa14.23□□□□□ -0.13
TRAPPC11-201ENST00000334690 FOXA2Q9Y261 457 aaPredicted RBP14.23□□□□□ -0.13
TRAPPC11-201ENST00000334690 LRRK1Q38SD2 2015 aa14.23□□□□□ -0.13
TRAPPC11-201ENST00000334690 A0A1B0GW15 77 aa14.23□□□□□ -0.13
TRAPPC11-201ENST00000334690 IGKV1D-33P01593 117 aa14.23□□□□□ -0.13
TRAPPC11-201ENST00000334690 IGKV1-33P01594 117 aa14.23□□□□□ -0.13
TRAPPC11-201ENST00000334690 PMCHL2Q9BQD1 86 aa14.23□□□□□ -0.13
TRAPPC11-201ENST00000334690 RSPO3Q9BXY4 272 aaPredicted RBP14.23□□□□□ -0.13
TRAPPC11-201ENST00000334690 OSTCQ9NRP0 149 aa14.23□□□□□ -0.13
TRAPPC11-201ENST00000334690 PLSCR4Q9NRQ2 329 aa14.23□□□□□ -0.13
TRAPPC11-201ENST00000334690 AUP1Q9Y679 476 aa14.23□□□□□ -0.13
TRAPPC11-201ENST00000334690 FOXI3A8MTJ6 420 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC11-201ENST00000334690 TMEM133Q9H2Q1 129 aa14.22□□□□□ -0.13
TRAPPC11-201ENST00000334690 RPUSD1Q9UJJ7 312 aaKnown RBP14.22□□□□□ -0.13
TRAPPC11-201ENST00000334690 HEATR5AQ86XA9 2040 aa14.22□□□□□ -0.13
TRAPPC11-201ENST00000334690 PCNX1Q96RV3 2341 aa14.22□□□□□ -0.13
TRAPPC11-201ENST00000334690 PSPNO60542 156 aa14.22□□□□□ -0.13
TRAPPC11-201ENST00000334690 HIST1H2BKO60814 126 aa14.22□□□□□ -0.13
TRAPPC11-201ENST00000334690 HIST1H2BJP06899 126 aa14.22□□□□□ -0.13
TRAPPC11-201ENST00000334690 FABP2P12104 132 aa14.22□□□□□ -0.13
TRAPPC11-201ENST00000334690 HIST1H2BOP23527 126 aa14.22□□□□□ -0.13
TRAPPC11-201ENST00000334690 HIST1H2BBP33778 126 aa14.22□□□□□ -0.13
TRAPPC11-201ENST00000334690 HIST1H2BDP58876 126 aa14.22□□□□□ -0.13
TRAPPC11-201ENST00000334690 HIST1H2BCP62807 126 aa14.22□□□□□ -0.13
TRAPPC11-201ENST00000334690 HIST2H2BEQ16778 126 aa14.22□□□□□ -0.13
TRAPPC11-201ENST00000334690 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC11-201ENST00000334690 RNF144BQ7Z419 303 aa14.22□□□□□ -0.13
TRAPPC11-201ENST00000334690 HIST1H2BHQ93079 126 aa14.22□□□□□ -0.13
TRAPPC11-201ENST00000334690 HIST1H2BNQ99877 126 aa14.22□□□□□ -0.13
TRAPPC11-201ENST00000334690 HIST1H2BMQ99879 126 aa14.22□□□□□ -0.13
TRAPPC11-201ENST00000334690 FBXL7Q9UJT9 491 aa14.22□□□□□ -0.13
TRAPPC11-201ENST00000334690 IZUMO1RA6ND01 250 aa14.22□□□□□ -0.13
TRAPPC11-201ENST00000334690 FBLL1A6NHQ2 334 aaKnown RBP14.22□□□□□ -0.13
TRAPPC11-201ENST00000334690 OR9G9P0C7N8 305 aa14.22□□□□□ -0.13
TRAPPC11-201ENST00000334690 C1QTNF9P0C862 333 aa14.22□□□□□ -0.13
TRAPPC11-201ENST00000334690 ATOH7Q8N100 152 aa14.22□□□□□ -0.13
TRAPPC11-201ENST00000334690 COLCA2A8K830 154 aa14.22□□□□□ -0.13
TRAPPC11-201ENST00000334690 ETV2O00321 342 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC11-201ENST00000334690 TCTAP57738 103 aa14.22□□□□□ -0.13
TRAPPC11-201ENST00000334690 FAM53AQ6NSI3 398 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC11-201ENST00000334690 COX6B1P14854 86 aa14.21□□□□□ -0.13
TRAPPC11-201ENST00000334690 AREGP15514 252 aa14.21□□□□□ -0.13
TRAPPC11-201ENST00000334690 TSPOP30536 169 aa14.21□□□□□ -0.13
TRAPPC11-201ENST00000334690 EFNB3Q15768 340 aa14.21□□□□□ -0.13
TRAPPC11-201ENST00000334690 RNFT1Q5M7Z0 435 aa14.21□□□□□ -0.13
TRAPPC11-201ENST00000334690 PPP1R27Q86WC6 154 aa14.21□□□□□ -0.13
TRAPPC11-201ENST00000334690 DDB2Q92466 427 aa14.21□□□□□ -0.13
TRAPPC11-201ENST00000334690 KCNS1Q96KK3 526 aa14.21□□□□□ -0.13
TRAPPC11-201ENST00000334690 ZNF257Q9Y2Q1 563 aa14.21□□□□□ -0.13
TRAPPC11-201ENST00000334690 B3GALT5-AS1P59052 145 aa14.21□□□□□ -0.14
TRAPPC11-201ENST00000334690 ARPC1AQ92747 370 aa14.21□□□□□ -0.14
TRAPPC11-201ENST00000334690 TRBV20OR9-2A0A075B6H5 130 aa14.2□□□□□ -0.14
TRAPPC11-201ENST00000334690 UBE2CO00762 179 aa14.2□□□□□ -0.14
TRAPPC11-201ENST00000334690 Q0VFX4 171 aa14.2□□□□□ -0.14
TRAPPC11-201ENST00000334690 ASCL4Q6XD76 172 aa14.2□□□□□ -0.14
TRAPPC11-201ENST00000334690 WNT10AQ9GZT5 417 aa14.2□□□□□ -0.14
TRAPPC11-201ENST00000334690 GCSHP23434 173 aa14.2□□□□□ -0.14
TRAPPC11-201ENST00000334690 TIMP3P35625 211 aa14.2□□□□□ -0.14
TRAPPC11-201ENST00000334690 RNASE6Q93091 150 aaKnown RBP14.2□□□□□ -0.14
TRAPPC11-201ENST00000334690 UQCRFS1P47985 274 aa14.2□□□□□ -0.14
TRAPPC11-201ENST00000334690 TMEM14EPQ6UXP3 125 aa14.2□□□□□ -0.14
TRAPPC11-201ENST00000334690 Q9H3A6 140 aa14.2□□□□□ -0.14
TRAPPC11-201ENST00000334690 IGKV1-5P01602 117 aa14.2□□□□□ -0.14
TRAPPC11-201ENST00000334690 LYL1P12980 280 aa14.2□□□□□ -0.14
TRAPPC11-201ENST00000334690 HERPUD1Q15011 391 aa14.2□□□□□ -0.14
TRAPPC11-201ENST00000334690 TNFRSF14Q92956 283 aa14.2□□□□□ -0.14
TRAPPC11-201ENST00000334690 FANCMQ8IYD8 2048 aa14.19□□□□□ -0.14
TRAPPC11-201ENST00000334690 TCRBV4S1A1TA0A5B7 111 aa14.19□□□□□ -0.14
TRAPPC11-201ENST00000334690 IGHV1-46P01743 117 aa14.19□□□□□ -0.14
TRAPPC11-201ENST00000334690 LY6EQ16553 131 aa14.19□□□□□ -0.14
TRAPPC11-201ENST00000334690 HIGD1CA8MV81 97 aa14.19□□□□□ -0.14
TRAPPC11-201ENST00000334690 TFF1P04155 84 aa14.19□□□□□ -0.14
TRAPPC11-201ENST00000334690 TREML4Q6UXN2 200 aa14.19□□□□□ -0.14
TRAPPC11-201ENST00000334690 PRELID3AQ96N28 172 aa14.19□□□□□ -0.14
TRAPPC11-201ENST00000334690 PRDM13Q9H4Q3 707 aa14.19□□□□□ -0.14
TRAPPC11-201ENST00000334690 CHODLQ9H9P2 273 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms