RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 ZNF503-AS2A6NEH8 195 aa20■□□□□ 0.79
SOX1-201ENST00000330949 ERVK-16P61578 105 aa20■□□□□ 0.79
SOX1-201ENST00000330949 ZNF841Q6ZN19 808 aa20■□□□□ 0.79
SOX1-201ENST00000330949 AP1S3Q96PC3 154 aa20■□□□□ 0.79
SOX1-201ENST00000330949 ZNF835Q9Y2P0 537 aa20■□□□□ 0.79
SOX1-201ENST00000330949 FCGR3BO75015 233 aa19.99■□□□□ 0.79
SOX1-201ENST00000330949 HAND1O96004 215 aa19.99■□□□□ 0.79
SOX1-201ENST00000330949 TAS2R45P59539 299 aa19.99■□□□□ 0.79
SOX1-201ENST00000330949 SLC35E4Q6ICL7 350 aa19.99■□□□□ 0.79
SOX1-201ENST00000330949 DSPP15924 2871 aaKnown RBP19.99■□□□□ 0.79
SOX1-201ENST00000330949 LOC102723996A0A087X1L8 192 aa19.99■□□□□ 0.79
SOX1-201ENST00000330949 TRGV8A0A0C4DH27 118 aa19.99■□□□□ 0.79
SOX1-201ENST00000330949 IGHV1-24A0A0C4DH33 117 aa19.99■□□□□ 0.79
SOX1-201ENST00000330949 PSPNO60542 156 aa19.99■□□□□ 0.79
SOX1-201ENST00000330949 IGFBP2P18065 325 aa19.99■□□□□ 0.79
SOX1-201ENST00000330949 DUTP33316 252 aaKnown RBP19.99■□□□□ 0.79
SOX1-201ENST00000330949 CAMPP49913 170 aa19.99■□□□□ 0.79
SOX1-201ENST00000330949 PLGLB1Q02325 96 aa19.99■□□□□ 0.79
SOX1-201ENST00000330949 GABRA6Q16445 453 aa19.99■□□□□ 0.79
SOX1-201ENST00000330949 NABP2Q9BQ15 211 aa19.99■□□□□ 0.79
SOX1-201ENST00000330949 PSG11Q9UQ72 335 aa19.99■□□□□ 0.79
SOX1-201ENST00000330949 RBPJQ06330 500 aa19.98■□□□□ 0.79
SOX1-201ENST00000330949 NHLRC2Q8NBF2 726 aa19.98■□□□□ 0.79
SOX1-201ENST00000330949 PMCHL2Q9BQD1 86 aa19.98■□□□□ 0.79
SOX1-201ENST00000330949 FAM231BA6NCW3 169 aa19.98■□□□□ 0.79
SOX1-201ENST00000330949 SH2D7A6NKC9 451 aaPredicted RBP19.98■□□□□ 0.79
SOX1-201ENST00000330949 C16orf54Q6UWD8 224 aa19.98■□□□□ 0.79
SOX1-201ENST00000330949 WDR86Q86TI4 376 aa19.98■□□□□ 0.79
SOX1-201ENST00000330949 WFDC8Q8IUA0 241 aa19.98■□□□□ 0.79
SOX1-201ENST00000330949 TCF19Q9Y242 345 aa19.98■□□□□ 0.79
SOX1-201ENST00000330949 FOXF2Q12947 444 aa19.98■□□□□ 0.79
SOX1-201ENST00000330949 SNRNP40Q96DI7 357 aaKnown RBP19.98■□□□□ 0.79
SOX1-201ENST00000330949 ZNF503Q96F45 646 aa19.98■□□□□ 0.79
SOX1-201ENST00000330949 TET2Q6N021 2002 aaPredicted RBP19.97■□□□□ 0.79
SOX1-201ENST00000330949 ZFHX4Q86UP3 3567 aa19.97■□□□□ 0.79
SOX1-201ENST00000330949 SP9P0CG40 484 aa19.97■□□□□ 0.79
SOX1-201ENST00000330949 MAP1LC3CQ9BXW4 147 aa19.97■□□□□ 0.79
SOX1-201ENST00000330949 OR51B2Q9Y5P1 312 aa19.97■□□□□ 0.79
SOX1-201ENST00000330949 OR5AL1P0C617 328 aa19.97■□□□□ 0.79
SOX1-201ENST00000330949 BMI1P35226 326 aa19.97■□□□□ 0.79
SOX1-201ENST00000330949 FAM216AQ8WUB2 273 aa19.97■□□□□ 0.79
SOX1-201ENST00000330949 WDR54Q9H977 334 aa19.97■□□□□ 0.79
SOX1-201ENST00000330949 AHRRA9YTQ3 701 aa19.96■□□□□ 0.79
SOX1-201ENST00000330949 AESQ08117 197 aa19.96■□□□□ 0.79
SOX1-201ENST00000330949 C5orf17Q8NAS9 161 aa19.96■□□□□ 0.79
SOX1-201ENST00000330949 C9orf172C9J069 976 aa19.96■□□□□ 0.79
SOX1-201ENST00000330949 LINC00173Q6ZV60 143 aa19.96■□□□□ 0.79
SOX1-201ENST00000330949 HIGD1CA8MV81 97 aa19.95■□□□□ 0.78
SOX1-201ENST00000330949 FNDC10F2Z333 226 aa19.95■□□□□ 0.78
SOX1-201ENST00000330949 LIPFP07098 398 aa19.95■□□□□ 0.78
SOX1-201ENST00000330949 SP1P08047 785 aa19.95■□□□□ 0.78
SOX1-201ENST00000330949 HTR1DP28221 377 aa19.95■□□□□ 0.78
SOX1-201ENST00000330949 CEBPDP49716 269 aaPredicted RBP19.95■□□□□ 0.78
SOX1-201ENST00000330949 BPIFA4PQ86YQ2 179 aa19.95■□□□□ 0.78
SOX1-201ENST00000330949 TMEM186Q96B77 213 aa19.95■□□□□ 0.78
SOX1-201ENST00000330949 C19orf24Q9BVV8 132 aa19.95■□□□□ 0.78
SOX1-201ENST00000330949 GDF1P27539 372 aa19.95■□□□□ 0.78
SOX1-201ENST00000330949 FNDC4Q9H6D8 234 aaPredicted RBP19.95■□□□□ 0.78
SOX1-201ENST00000330949 PTPRBP23467 1997 aa19.95■□□□□ 0.78
SOX1-201ENST00000330949 IGKV3D-15A0A087WSY6 115 aa19.94■□□□□ 0.78
SOX1-201ENST00000330949 TMEM238LA0A1B0GVL6 79 aa19.94■□□□□ 0.78
SOX1-201ENST00000330949 PPIAL4DF5H284 164 aa19.94■□□□□ 0.78
SOX1-201ENST00000330949 A0A1B0GXF2 115 aa19.94■□□□□ 0.78
SOX1-201ENST00000330949 COX8AP10176 69 aa19.94■□□□□ 0.78
SOX1-201ENST00000330949 HIST1H1EP10412 219 aaKnown RBP19.94■□□□□ 0.78
SOX1-201ENST00000330949 FOLR3P41439 243 aa19.94■□□□□ 0.78
SOX1-201ENST00000330949 GPR12P47775 334 aa19.94■□□□□ 0.78
SOX1-201ENST00000330949 TMEM97Q5BJF2 176 aa19.94■□□□□ 0.78
SOX1-201ENST00000330949 SAMD13Q5VXD3 122 aa19.94■□□□□ 0.78
SOX1-201ENST00000330949 IDI2-AS1Q9NZ38 188 aa19.94■□□□□ 0.78
SOX1-201ENST00000330949 IGHV3-43A0A0B4J1X8 118 aa19.94■□□□□ 0.78
SOX1-201ENST00000330949 C9orf118A6NHY6 69 aa19.94■□□□□ 0.78
SOX1-201ENST00000330949 IGHV3-43DP0DP04 118 aa19.94■□□□□ 0.78
SOX1-201ENST00000330949 FOXG1P55316 489 aaPredicted RBP19.94■□□□□ 0.78
SOX1-201ENST00000330949 SPINK14Q6IE38 97 aa19.94■□□□□ 0.78
SOX1-201ENST00000330949 NEGR1Q7Z3B1 354 aa19.94■□□□□ 0.78
SOX1-201ENST00000330949 VKORC1L1Q8N0U8 176 aa19.94■□□□□ 0.78
SOX1-201ENST00000330949 ZC2HC1AQ96GY0 325 aa19.94■□□□□ 0.78
SOX1-201ENST00000330949 PINLYPA6NC86 204 aa19.93■□□□□ 0.78
SOX1-201ENST00000330949 APOA2P02652 100 aa19.93■□□□□ 0.78
SOX1-201ENST00000330949 Q0VFX4 171 aa19.93■□□□□ 0.78
SOX1-201ENST00000330949 Q8TCH9 128 aa19.93■□□□□ 0.78
SOX1-201ENST00000330949 H1FXQ92522 213 aaKnown RBP19.93■□□□□ 0.78
SOX1-201ENST00000330949 K7EP34 96 aa19.93■□□□□ 0.78
SOX1-201ENST00000330949 SMPD2O60906 423 aa19.93■□□□□ 0.78
SOX1-201ENST00000330949 TRAT1Q6PIZ9 186 aa19.93■□□□□ 0.78
SOX1-201ENST00000330949 TMEM251Q8N6I4 163 aa19.93■□□□□ 0.78
SOX1-201ENST00000330949 DOCK10Q96BY6 2186 aa19.92■□□□□ 0.78
SOX1-201ENST00000330949 DEFB108AA8MXU0 73 aa19.92■□□□□ 0.78
SOX1-201ENST00000330949 LGALS7P47929 136 aa19.92■□□□□ 0.78
SOX1-201ENST00000330949 MRPL49Q13405 166 aaKnown RBP19.92■□□□□ 0.78
SOX1-201ENST00000330949 IL11RAQ14626 422 aa19.92■□□□□ 0.78
SOX1-201ENST00000330949 SSX8Q7RTT4 187 aa19.92■□□□□ 0.78
SOX1-201ENST00000330949 TMEM140Q9NV12 185 aa19.92■□□□□ 0.78
SOX1-201ENST00000330949 CFAP47Q6ZTR5 3102 aa19.92■□□□□ 0.78
SOX1-201ENST00000330949 TRAV3A0A0B4J244 114 aa19.92■□□□□ 0.78
SOX1-201ENST00000330949 IGHV3-64DA0A0J9YX35 117 aa19.92■□□□□ 0.78
SOX1-201ENST00000330949 A6NDN8 102 aa19.92■□□□□ 0.78
SOX1-201ENST00000330949 H3BRM9 83 aa19.92■□□□□ 0.78
SOX1-201ENST00000330949 HBBP68871 147 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms