RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 RNASE2P10153 161 aaKnown RBP13.86□□□□□ -0.19
SSSCA1-201ENST00000309328 NPY1RP25929 384 aa13.86□□□□□ -0.19
SSSCA1-201ENST00000309328 ZNF616Q08AN1 781 aa13.86□□□□□ -0.19
SSSCA1-201ENST00000309328 FHL3Q13643 280 aa13.86□□□□□ -0.19
SSSCA1-201ENST00000309328 OR1N2Q8NGR9 330 aa13.86□□□□□ -0.19
SSSCA1-201ENST00000309328 OR10C1Q96KK4 312 aa13.86□□□□□ -0.19
SSSCA1-201ENST00000309328 RAB40CQ96S21 281 aa13.86□□□□□ -0.19
SSSCA1-201ENST00000309328 TXN2Q99757 166 aa13.86□□□□□ -0.19
SSSCA1-201ENST00000309328 GSKIPQ9P0R6 139 aa13.86□□□□□ -0.19
SSSCA1-201ENST00000309328 PEF1Q9UBV8 284 aaKnown RBP13.86□□□□□ -0.19
SSSCA1-201ENST00000309328 MPTX1A8MV57 137 aa13.85□□□□□ -0.19
SSSCA1-201ENST00000309328 LINC01619G3V211 115 aa13.85□□□□□ -0.19
SSSCA1-201ENST00000309328 SCGB2A1O75556 95 aa13.85□□□□□ -0.19
SSSCA1-201ENST00000309328 NDUFB8O95169 186 aa13.85□□□□□ -0.19
SSSCA1-201ENST00000309328 IFNA10P01566 189 aa13.85□□□□□ -0.19
SSSCA1-201ENST00000309328 IGHV3-11P01762 117 aa13.85□□□□□ -0.19
SSSCA1-201ENST00000309328 FCGR2BP31994 310 aaPredicted RBP13.85□□□□□ -0.19
SSSCA1-201ENST00000309328 TAS2R30P59541 319 aa13.85□□□□□ -0.19
SSSCA1-201ENST00000309328 RAB11AP62491 216 aa13.85□□□□□ -0.19
SSSCA1-201ENST00000309328 ETFRF1Q6IPR1 90 aa13.85□□□□□ -0.19
SSSCA1-201ENST00000309328 OR11H1Q8NG94 326 aa13.85□□□□□ -0.19
SSSCA1-201ENST00000309328 SCAF4O95104 1147 aaKnown RBP13.84□□□□□ -0.19
SSSCA1-201ENST00000309328 NXPH3O95157 252 aa13.84□□□□□ -0.19
SSSCA1-201ENST00000309328 PVALBP20472 110 aaPredicted RBP13.84□□□□□ -0.19
SSSCA1-201ENST00000309328 ASB13Q8WXK3 278 aa13.84□□□□□ -0.19
SSSCA1-201ENST00000309328 MISP3Q96FF7 219 aa13.84□□□□□ -0.19
SSSCA1-201ENST00000309328 RAX2Q96IS3 184 aa13.84□□□□□ -0.19
SSSCA1-201ENST00000309328 NMES1Q9C002 83 aa13.84□□□□□ -0.19
SSSCA1-201ENST00000309328 C21orf62Q9NYP8 219 aa13.84□□□□□ -0.19
SSSCA1-201ENST00000309328 DMRT1Q9Y5R6 373 aa13.84□□□□□ -0.19
SSSCA1-201ENST00000309328 ALG5Q9Y673 324 aa13.84□□□□□ -0.19
SSSCA1-201ENST00000309328 K7EIM0 57 aa13.83□□□□□ -0.2
SSSCA1-201ENST00000309328 CCSO14618 274 aa13.83□□□□□ -0.2
SSSCA1-201ENST00000309328 GOSR2O14653 212 aa13.83□□□□□ -0.2
SSSCA1-201ENST00000309328 SLC25A4P12235 298 aa13.83□□□□□ -0.2
SSSCA1-201ENST00000309328 MFAP2P55001 183 aa13.83□□□□□ -0.2
SSSCA1-201ENST00000309328 SPSB3Q6PJ21 355 aa13.83□□□□□ -0.2
SSSCA1-201ENST00000309328 C19orf35Q6ZS72 473 aa13.83□□□□□ -0.2
SSSCA1-201ENST00000309328 C18orf65Q6ZTR6 163 aa13.83□□□□□ -0.2
SSSCA1-201ENST00000309328 ZNF502Q8TBZ5 544 aa13.83□□□□□ -0.2
SSSCA1-201ENST00000309328 BSCL2Q96G97 398 aaPredicted RBP13.83□□□□□ -0.2
SSSCA1-201ENST00000309328 SMIM8Q96KF7 97 aa13.83□□□□□ -0.2
SSSCA1-201ENST00000309328 OR5B12Q96R08 314 aa13.83□□□□□ -0.2
SSSCA1-201ENST00000309328 I3L2K1 104 aa13.82□□□□□ -0.2
SSSCA1-201ENST00000309328 TSPAN15O95858 294 aa13.82□□□□□ -0.2
SSSCA1-201ENST00000309328 SCGB1D2O95969 90 aa13.82□□□□□ -0.2
SSSCA1-201ENST00000309328 MT-CO2P00403 227 aa13.82□□□□□ -0.2
SSSCA1-201ENST00000309328 OPRK1P41145 380 aa13.82□□□□□ -0.2
SSSCA1-201ENST00000309328 NPBWR1P48145 328 aa13.82□□□□□ -0.2
SSSCA1-201ENST00000309328 MFAP4P55083 255 aa13.82□□□□□ -0.2
SSSCA1-201ENST00000309328 POLR2GP62487 172 aaKnown RBP eCLIP13.82□□□□□ -0.2
SSSCA1-201ENST00000309328 SCARB1Q8WTV0 552 aa13.82□□□□□ -0.2
SSSCA1-201ENST00000309328 MCRIP2Q9BUT9 160 aaKnown RBP13.82□□□□□ -0.2
SSSCA1-201ENST00000309328 GPR61Q9BZJ8 451 aa13.82□□□□□ -0.2
SSSCA1-201ENST00000309328 MAGT1Q9H0U3 335 aa13.82□□□□□ -0.2
SSSCA1-201ENST00000309328 MED28Q9H204 178 aa13.82□□□□□ -0.2
SSSCA1-201ENST00000309328 STRAPQ9Y3F4 350 aaKnown RBP13.82□□□□□ -0.2
SSSCA1-201ENST00000309328 TRRAPQ9Y4A5 3859 aa13.81□□□□□ -0.2
SSSCA1-201ENST00000309328 MFSD2BA6NFX1 497 aa13.81□□□□□ -0.2
SSSCA1-201ENST00000309328 SSSCA1O60232 199 aa13.81□□□□□ -0.2
SSSCA1-201ENST00000309328 TSC22D2O75157 780 aa13.81□□□□□ -0.2
SSSCA1-201ENST00000309328 MBPP02686 304 aaPredicted RBP13.81□□□□□ -0.2
SSSCA1-201ENST00000309328 IFNA4P05014 189 aa13.81□□□□□ -0.2
SSSCA1-201ENST00000309328 PET100P0DJ07 73 aa13.81□□□□□ -0.2
SSSCA1-201ENST00000309328 DEFB136Q30KP8 78 aa13.81□□□□□ -0.2
SSSCA1-201ENST00000309328 HIST2H2BDQ6DRA6 164 aa13.81□□□□□ -0.2
SSSCA1-201ENST00000309328 TREML4Q6UXN2 200 aa13.81□□□□□ -0.2
SSSCA1-201ENST00000309328 ETV3LQ6ZN32 361 aa13.81□□□□□ -0.2
SSSCA1-201ENST00000309328 WFDC9Q8NEX5 89 aa13.81□□□□□ -0.2
SSSCA1-201ENST00000309328 CACNG8Q8WXS5 425 aa13.81□□□□□ -0.2
SSSCA1-201ENST00000309328 PINX1Q96BK5 328 aaKnown RBP13.81□□□□□ -0.2
SSSCA1-201ENST00000309328 MGAT4CQ9UBM8 478 aa13.81□□□□□ -0.2
SSSCA1-201ENST00000309328 IGHV4OR15-8A0A075B7B6 117 aa13.8□□□□□ -0.2
SSSCA1-201ENST00000309328 A0A087WW49 117 aa13.8□□□□□ -0.2
SSSCA1-201ENST00000309328 L7N2F9 121 aa13.8□□□□□ -0.2
SSSCA1-201ENST00000309328 GGCTO75223 188 aaKnown RBP13.8□□□□□ -0.2
SSSCA1-201ENST00000309328 RLN2P04090 185 aa13.8□□□□□ -0.2
SSSCA1-201ENST00000309328 IAPPP10997 89 aa13.8□□□□□ -0.2
SSSCA1-201ENST00000309328 GPX4P36969 197 aaPredicted RBP13.8□□□□□ -0.2
SSSCA1-201ENST00000309328 VAMP2P63027 116 aa13.8□□□□□ -0.2
SSSCA1-201ENST00000309328 IL15RAQ13261 267 aa13.8□□□□□ -0.2
SSSCA1-201ENST00000309328 RPEL1Q2QD12 228 aa13.8□□□□□ -0.2
SSSCA1-201ENST00000309328 LINC00482Q8N8I6 264 aa13.8□□□□□ -0.2
SSSCA1-201ENST00000309328 DCUN1D4Q92564 292 aa13.8□□□□□ -0.2
SSSCA1-201ENST00000309328 CCDC140Q96MF4 163 aa13.8□□□□□ -0.2
SSSCA1-201ENST00000309328 PSENENQ9NZ42 101 aa13.8□□□□□ -0.2
SSSCA1-201ENST00000309328 ANKRD34BA5PLL1 514 aa13.79□□□□□ -0.2
SSSCA1-201ENST00000309328 CLEC3BP05452 202 aa13.79□□□□□ -0.2
SSSCA1-201ENST00000309328 CD33P20138 364 aa13.79□□□□□ -0.2
SSSCA1-201ENST00000309328 HOXD3P31249 432 aaPredicted RBP13.79□□□□□ -0.2
SSSCA1-201ENST00000309328 ARL3P36405 182 aa13.79□□□□□ -0.2
SSSCA1-201ENST00000309328 DEFA5Q01523 94 aa13.79□□□□□ -0.2
SSSCA1-201ENST00000309328 Q56UQ5 140 aa13.79□□□□□ -0.2
SSSCA1-201ENST00000309328 CLEC19AQ6UXS0 136 aa13.79□□□□□ -0.2
SSSCA1-201ENST00000309328 RCC1LQ96I51 464 aaKnown RBP13.79□□□□□ -0.2
SSSCA1-201ENST00000309328 RCL1Q9Y2P8 373 aaKnown RBP13.79□□□□□ -0.2
SSSCA1-201ENST00000309328 TRAV30A0A087WSZ9 112 aa13.78□□□□□ -0.2
SSSCA1-201ENST00000309328 C15orf62A8K5M9 175 aa13.78□□□□□ -0.2
SSSCA1-201ENST00000309328 K7EPK0 472 aa13.78□□□□□ -0.2
SSSCA1-201ENST00000309328 NUPL2O15504 423 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms