RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 SSMEM1Q8WWF3 244 aa12.92□□□□□ -0.34
LEMD3-201ENST00000308330 PPDPFLQ8WWR9 84 aa12.92□□□□□ -0.34
LEMD3-201ENST00000308330 TAAR6Q96RI8 345 aa12.92□□□□□ -0.34
LEMD3-201ENST00000308330 OR2H1Q9GZK4 316 aa12.92□□□□□ -0.34
LEMD3-201ENST00000308330 IGLL1P15814 213 aa12.92□□□□□ -0.34
LEMD3-201ENST00000308330 GUSBP1Q15486 140 aa12.92□□□□□ -0.34
LEMD3-201ENST00000308330 TMEM30CPA0ZSE6 113 aa12.91□□□□□ -0.34
LEMD3-201ENST00000308330 MLNRO43193 412 aa12.91□□□□□ -0.34
LEMD3-201ENST00000308330 ZFP36L1Q07352 338 aaKnown RBP12.91□□□□□ -0.34
LEMD3-201ENST00000308330 Q0VG73 95 aa12.91□□□□□ -0.34
LEMD3-201ENST00000308330 ZNF502Q8TBZ5 544 aa12.91□□□□□ -0.34
LEMD3-201ENST00000308330 CACNG8Q8WXS5 425 aa12.91□□□□□ -0.34
LEMD3-201ENST00000308330 TMEM222Q9H0R3 208 aa12.91□□□□□ -0.34
LEMD3-201ENST00000308330 NOTCH3Q9UM47 2321 aa12.91□□□□□ -0.34
LEMD3-201ENST00000308330 A4D1N5 150 aa12.91□□□□□ -0.34
LEMD3-201ENST00000308330 C8orf86Q6ZUL3 223 aa12.91□□□□□ -0.34
LEMD3-201ENST00000308330 MOB3BQ86TA1 216 aa12.91□□□□□ -0.34
LEMD3-201ENST00000308330 C19orf24Q9BVV8 132 aa12.91□□□□□ -0.34
LEMD3-201ENST00000308330 ZSWIM8A7E2V4 1837 aa12.91□□□□□ -0.34
LEMD3-201ENST00000308330 GREB1Q4ZG55 1949 aa12.91□□□□□ -0.34
LEMD3-201ENST00000308330 SUB1P53999 127 aaKnown RBP eCLIP12.91□□□□□ -0.34
LEMD3-201ENST00000308330 TMEM187Q14656 261 aa12.91□□□□□ -0.34
LEMD3-201ENST00000308330 TMEM155Q4W5P6 130 aa12.91□□□□□ -0.34
LEMD3-201ENST00000308330 TRAV2A0A0B4J234 112 aa12.9□□□□□ -0.34
LEMD3-201ENST00000308330 CSRP3P50461 194 aa12.9□□□□□ -0.34
LEMD3-201ENST00000308330 VOPP1Q96AW1 172 aa12.9□□□□□ -0.34
LEMD3-201ENST00000308330 BEX4Q9NWD9 120 aaPredicted RBP12.9□□□□□ -0.34
LEMD3-201ENST00000308330 RABAC1Q9UI14 185 aa12.9□□□□□ -0.34
LEMD3-201ENST00000308330 HSPE1P61604 102 aaKnown RBP12.9□□□□□ -0.34
LEMD3-201ENST00000308330 HBBP68871 147 aa12.9□□□□□ -0.34
LEMD3-201ENST00000308330 FHL5Q5TD97 284 aa12.9□□□□□ -0.34
LEMD3-201ENST00000308330 PPP1R27Q86WC6 154 aa12.9□□□□□ -0.34
LEMD3-201ENST00000308330 SSBP3Q9BWW4 388 aaPredicted RBP12.9□□□□□ -0.34
LEMD3-201ENST00000308330 COMMD5Q9GZQ3 224 aa12.9□□□□□ -0.34
LEMD3-201ENST00000308330 CXXC4Q9H2H0 198 aa12.9□□□□□ -0.34
LEMD3-201ENST00000308330 TMPRSS2O15393 492 aa12.9□□□□□ -0.34
LEMD3-201ENST00000308330 FOXH1O75593 365 aa12.9□□□□□ -0.34
LEMD3-201ENST00000308330 IL11P20809 199 aa12.9□□□□□ -0.34
LEMD3-201ENST00000308330 COX7A1P24310 79 aa12.9□□□□□ -0.34
LEMD3-201ENST00000308330 ERVK11-1P61568 191 aa12.9□□□□□ -0.34
LEMD3-201ENST00000308330 IGLV3-21P80748 117 aaPredicted RBP12.9□□□□□ -0.34
LEMD3-201ENST00000308330 SHISA2Q6UWI4 295 aa12.9□□□□□ -0.34
LEMD3-201ENST00000308330 A0A1W2PRD5 423 aa12.9□□□□□ -0.34
LEMD3-201ENST00000308330 A0A1W2PRF3 423 aa12.9□□□□□ -0.34
LEMD3-201ENST00000308330 A0A1W2PRM7 423 aa12.9□□□□□ -0.34
LEMD3-201ENST00000308330 RPL11P62913 178 aaKnown RBP12.9□□□□□ -0.34
LEMD3-201ENST00000308330 NUP37Q8NFH4 326 aa12.9□□□□□ -0.34
LEMD3-201ENST00000308330 CADP27708 2225 aa12.9□□□□□ -0.35
LEMD3-201ENST00000308330 FSTP19883 344 aa12.89□□□□□ -0.35
LEMD3-201ENST00000308330 FAM90A2PQ658T7 463 aa12.89□□□□□ -0.35
LEMD3-201ENST00000308330 MOGAT3Q86VF5 341 aa12.89□□□□□ -0.35
LEMD3-201ENST00000308330 OR1L4Q8NGR5 311 aa12.89□□□□□ -0.35
LEMD3-201ENST00000308330 HSD17B10Q99714 261 aaKnown RBP12.89□□□□□ -0.35
LEMD3-201ENST00000308330 RPL31P62899 125 aaKnown RBP12.89□□□□□ -0.35
LEMD3-201ENST00000308330 GNG5P63218 68 aa12.89□□□□□ -0.35
LEMD3-201ENST00000308330 CENPWQ5EE01 88 aa12.89□□□□□ -0.35
LEMD3-201ENST00000308330 MRPL14Q6P1L8 145 aaKnown RBP12.89□□□□□ -0.35
LEMD3-201ENST00000308330 TCF24Q7RTU0 167 aa12.89□□□□□ -0.35
LEMD3-201ENST00000308330 TRAV1-1A0A0B4J248 108 aa12.89□□□□□ -0.35
LEMD3-201ENST00000308330 KCNK17Q96T54 332 aa12.89□□□□□ -0.35
LEMD3-201ENST00000308330 PNRC2Q9NPJ4 139 aaKnown RBP12.89□□□□□ -0.35
LEMD3-201ENST00000308330 C17orf51A8MQB3 221 aa12.89□□□□□ -0.35
LEMD3-201ENST00000308330 CCL8P80075 99 aa12.89□□□□□ -0.35
LEMD3-201ENST00000308330 C1orf100Q5SVJ3 147 aa12.89□□□□□ -0.35
LEMD3-201ENST00000308330 ARPC1AQ92747 370 aa12.89□□□□□ -0.35
LEMD3-201ENST00000308330 MGST2Q99735 147 aa12.89□□□□□ -0.35
LEMD3-201ENST00000308330 DXOO77932 396 aaKnown RBP12.88□□□□□ -0.35
LEMD3-201ENST00000308330 STPG3Q8N7X2 389 aa12.88□□□□□ -0.35
LEMD3-201ENST00000308330 ZNF519Q8TB69 540 aa12.88□□□□□ -0.35
LEMD3-201ENST00000308330 IZUMO1RA6ND01 250 aa12.88□□□□□ -0.35
LEMD3-201ENST00000308330 PDCD6O75340 191 aa12.88□□□□□ -0.35
LEMD3-201ENST00000308330 RFPL3SP0C7P2 107 aa12.88□□□□□ -0.35
LEMD3-201ENST00000308330 CFHR1Q03591 330 aa12.88□□□□□ -0.35
LEMD3-201ENST00000308330 SPINK9Q5DT21 86 aa12.88□□□□□ -0.35
LEMD3-201ENST00000308330 SPACA3Q8IXA5 215 aa12.88□□□□□ -0.35
LEMD3-201ENST00000308330 LRTM2Q8N967 370 aa12.88□□□□□ -0.35
LEMD3-201ENST00000308330 AAMDCQ9H7C9 122 aa12.88□□□□□ -0.35
LEMD3-201ENST00000308330 CCL28Q9NRJ3 127 aa12.88□□□□□ -0.35
LEMD3-201ENST00000308330 EPDR1Q9UM22 224 aa12.88□□□□□ -0.35
LEMD3-201ENST00000308330 A0A1W2PS18 150 aa12.88□□□□□ -0.35
LEMD3-201ENST00000308330 MRPL23Q16540 153 aaKnown RBP12.88□□□□□ -0.35
LEMD3-201ENST00000308330 SYS1-DBNDD2H3BUS1 97 aa12.88□□□□□ -0.35
LEMD3-201ENST00000308330 NTN3O00634 580 aaPredicted RBP12.88□□□□□ -0.35
LEMD3-201ENST00000308330 TNFRSF6BO95407 300 aa12.88□□□□□ -0.35
LEMD3-201ENST00000308330 APOHP02749 345 aaPredicted RBP12.88□□□□□ -0.35
LEMD3-201ENST00000308330 PGLYRP4Q96LB8 373 aa12.88□□□□□ -0.35
LEMD3-201ENST00000308330 PRSS27Q9BQR3 290 aa12.88□□□□□ -0.35
LEMD3-201ENST00000308330 AGMATQ9BSE5 352 aa12.88□□□□□ -0.35
LEMD3-201ENST00000308330 RTBDNQ9BSG5 229 aaPredicted RBP12.88□□□□□ -0.35
LEMD3-201ENST00000308330 NCOR2Q9Y618 2525 aa12.87□□□□□ -0.35
LEMD3-201ENST00000308330 A0A1W2PRE2 83 aa12.87□□□□□ -0.35
LEMD3-201ENST00000308330 SH2D7A6NKC9 451 aaPredicted RBP12.87□□□□□ -0.35
LEMD3-201ENST00000308330 ARL14EPLP0DKL9 152 aa12.87□□□□□ -0.35
LEMD3-201ENST00000308330 ZNF585BQ52M93 769 aa12.87□□□□□ -0.35
LEMD3-201ENST00000308330 FAM27BQ5VT28 67 aa12.87□□□□□ -0.35
LEMD3-201ENST00000308330 OR10J6PQ8NGY7 276 aa12.87□□□□□ -0.35
LEMD3-201ENST00000308330 IMMP1LQ96LU5 166 aa12.87□□□□□ -0.35
LEMD3-201ENST00000308330 VGLL1Q99990 258 aa12.87□□□□□ -0.35
LEMD3-201ENST00000308330 RPL32P62910 135 aaKnown RBP12.87□□□□□ -0.35
LEMD3-201ENST00000308330 MRPL27Q9P0M9 148 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms