RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 DSCAML1Q8TD84 2053 aa13.53□□□□□ -0.24
SSH3-201ENST00000308127 A0A1W2PN81 502 aa13.53□□□□□ -0.24
SSH3-201ENST00000308127 C19orf67A6NJJ6 358 aa13.53□□□□□ -0.24
SSH3-201ENST00000308127 CHRNB4P30926 498 aa13.53□□□□□ -0.24
SSH3-201ENST00000308127 RANP62826 216 aaKnown RBP13.53□□□□□ -0.24
SSH3-201ENST00000308127 PAFAH1B2P68402 229 aa13.53□□□□□ -0.24
SSH3-201ENST00000308127 LPAR2Q9HBW0 351 aa13.53□□□□□ -0.24
SSH3-201ENST00000308127 ZNF71Q9NQZ8 489 aaPredicted RBP13.53□□□□□ -0.24
SSH3-201ENST00000308127 ZNF355PQ9NSJ1 428 aa13.53□□□□□ -0.24
SSH3-201ENST00000308127 IL19Q9UHD0 177 aa13.53□□□□□ -0.24
SSH3-201ENST00000308127 PROCRQ9UNN8 238 aa13.53□□□□□ -0.24
SSH3-201ENST00000308127 A0A1W2PS18 150 aa13.53□□□□□ -0.24
SSH3-201ENST00000308127 BRS3P32247 399 aa13.53□□□□□ -0.24
SSH3-201ENST00000308127 SLAQ13239 276 aa13.53□□□□□ -0.24
SSH3-201ENST00000308127 GUSBP1Q15486 140 aa13.53□□□□□ -0.24
SSH3-201ENST00000308127 C19orf35Q6ZS72 473 aa13.53□□□□□ -0.24
SSH3-201ENST00000308127 PPP1R35Q8TAP8 253 aa13.53□□□□□ -0.24
SSH3-201ENST00000308127 NEUROG1Q92886 237 aa13.53□□□□□ -0.24
SSH3-201ENST00000308127 IGHV3-21A0A0B4J1V1 117 aa13.52□□□□□ -0.24
SSH3-201ENST00000308127 BMPR1BO00238 502 aa13.52□□□□□ -0.24
SSH3-201ENST00000308127 REG1AP05451 166 aa13.52□□□□□ -0.24
SSH3-201ENST00000308127 DIAPH2-AS1Q14236 149 aa13.52□□□□□ -0.24
SSH3-201ENST00000308127 C21orf62-AS1Q17RA5 79 aa13.52□□□□□ -0.24
SSH3-201ENST00000308127 SPATA45Q537H7 98 aa13.52□□□□□ -0.24
SSH3-201ENST00000308127 TRAT1Q6PIZ9 186 aa13.52□□□□□ -0.24
SSH3-201ENST00000308127 Q8N976 141 aa13.52□□□□□ -0.24
SSH3-201ENST00000308127 C11orf52Q96A22 123 aa13.52□□□□□ -0.24
SSH3-201ENST00000308127 TMEM68Q96MH6 324 aa13.52□□□□□ -0.24
SSH3-201ENST00000308127 SLC35D1Q9NTN3 355 aa13.52□□□□□ -0.24
SSH3-201ENST00000308127 DKK4Q9UBT3 224 aa13.52□□□□□ -0.24
SSH3-201ENST00000308127 FOXA2Q9Y261 457 aaPredicted RBP13.52□□□□□ -0.24
SSH3-201ENST00000308127 TRGV8A0A0C4DH27 118 aa13.52□□□□□ -0.25
SSH3-201ENST00000308127 KBTBD11-OT1A0A1B0GTJ5 212 aa13.52□□□□□ -0.25
SSH3-201ENST00000308127 IGLV2-8P01709 118 aa13.52□□□□□ -0.25
SSH3-201ENST00000308127 CT45A6P0DMU7 189 aa13.52□□□□□ -0.25
SSH3-201ENST00000308127 CT45A5P0DMU8 189 aa13.52□□□□□ -0.25
SSH3-201ENST00000308127 CT45A7P0DMV0 189 aa13.52□□□□□ -0.25
SSH3-201ENST00000308127 GNG5P63218 68 aa13.52□□□□□ -0.25
SSH3-201ENST00000308127 MBNL2Q5VZF2 373 aaKnown RBP13.52□□□□□ -0.25
SSH3-201ENST00000308127 CDC42EP3Q9UKI2 254 aa13.52□□□□□ -0.25
SSH3-201ENST00000308127 ZFHX2Q9C0A1 2572 aaPredicted RBP13.51□□□□□ -0.25
SSH3-201ENST00000308127 TEX50A0A1B0GTY4 177 aa13.51□□□□□ -0.25
SSH3-201ENST00000308127 C9JCJ5 164 aa13.51□□□□□ -0.25
SSH3-201ENST00000308127 IGLV1-44P01699 117 aa13.51□□□□□ -0.25
SSH3-201ENST00000308127 SAA1P0DJI8 122 aaPredicted RBP13.51□□□□□ -0.25
SSH3-201ENST00000308127 AREGP15514 252 aa13.51□□□□□ -0.25
SSH3-201ENST00000308127 CAMPP49913 170 aa13.51□□□□□ -0.25
SSH3-201ENST00000308127 UBE2L3P68036 154 aaKnown RBP13.51□□□□□ -0.25
SSH3-201ENST00000308127 TXNDC17Q9BRA2 123 aa13.51□□□□□ -0.25
SSH3-201ENST00000308127 SFXN3Q9BWM7 321 aa13.51□□□□□ -0.25
SSH3-201ENST00000308127 ZNF586Q9NXT0 402 aa13.51□□□□□ -0.25
SSH3-201ENST00000308127 GOLT1BQ9Y3E0 138 aa13.51□□□□□ -0.25
SSH3-201ENST00000308127 ASH1LQ9NR48 2969 aaKnown RBP13.51□□□□□ -0.25
SSH3-201ENST00000308127 OTOGLQ3ZCN5 2332 aa13.51□□□□□ -0.25
SSH3-201ENST00000308127 RAI1Q7Z5J4 1906 aaPredicted RBP13.51□□□□□ -0.25
SSH3-201ENST00000308127 CCL3L1P16619 93 aa13.51□□□□□ -0.25
SSH3-201ENST00000308127 CX3CL1P78423 397 aa13.51□□□□□ -0.25
SSH3-201ENST00000308127 CCL8P80075 99 aa13.51□□□□□ -0.25
SSH3-201ENST00000308127 SEM1Q6ZVN7 128 aa13.51□□□□□ -0.25
SSH3-201ENST00000308127 TUBG2Q9NRH3 451 aa13.51□□□□□ -0.25
SSH3-201ENST00000308127 CORTO00230 105 aa13.5□□□□□ -0.25
SSH3-201ENST00000308127 DLEU1O43261 78 aa13.5□□□□□ -0.25
SSH3-201ENST00000308127 SP9P0CG40 484 aa13.5□□□□□ -0.25
SSH3-201ENST00000308127 KLF3P57682 345 aaPredicted RBP13.5□□□□□ -0.25
SSH3-201ENST00000308127 TECRQ9NZ01 308 aaKnown RBP13.5□□□□□ -0.25
SSH3-201ENST00000308127 SLC25A15Q9Y619 301 aa13.5□□□□□ -0.25
SSH3-201ENST00000308127 DCHS2Q6V1P9 2916 aa13.5□□□□□ -0.25
SSH3-201ENST00000308127 FAM90A9PA6NNJ1 464 aa13.5□□□□□ -0.25
SSH3-201ENST00000308127 DLX1P56177 255 aa13.5□□□□□ -0.25
SSH3-201ENST00000308127 C20orf144Q9BQM9 153 aa13.5□□□□□ -0.25
SSH3-201ENST00000308127 PRR33A8MZF0 331 aa13.5□□□□□ -0.25
SSH3-201ENST00000308127 M0QZ24 198 aa13.5□□□□□ -0.25
SSH3-201ENST00000308127 APC2O95996 2303 aa13.5□□□□□ -0.25
SSH3-201ENST00000308127 C3orf79P0CE67 100 aa13.5□□□□□ -0.25
SSH3-201ENST00000308127 USF1P22415 310 aaPredicted RBP13.5□□□□□ -0.25
SSH3-201ENST00000308127 DEFB109BQ30KR1 87 aa13.5□□□□□ -0.25
SSH3-201ENST00000308127 DMRTA1Q5VZB9 504 aa13.5□□□□□ -0.25
SSH3-201ENST00000308127 RUSC1-AS1Q66K80 236 aa13.5□□□□□ -0.25
SSH3-201ENST00000308127 DEFB123Q8N688 67 aa13.5□□□□□ -0.25
SSH3-201ENST00000308127 BSNQ9UPA5 3926 aa13.49□□□□□ -0.25
SSH3-201ENST00000308127 TMEM265A0A087WTH1 108 aa13.49□□□□□ -0.25
SSH3-201ENST00000308127 IGHG3P01860 377 aa13.49□□□□□ -0.25
SSH3-201ENST00000308127 CGB3P0DN86 165 aa13.49□□□□□ -0.25
SSH3-201ENST00000308127 CGB7P0DN87 165 aa13.49□□□□□ -0.25
SSH3-201ENST00000308127 BLNKQ8WV28 456 aa13.49□□□□□ -0.25
SSH3-201ENST00000308127 GNB1LQ9BYB4 327 aa13.49□□□□□ -0.25
SSH3-201ENST00000308127 MRPL20Q9BYC9 149 aaKnown RBP13.49□□□□□ -0.25
SSH3-201ENST00000308127 MRPL36Q9P0J6 103 aaKnown RBP13.49□□□□□ -0.25
SSH3-201ENST00000308127 MFAP2P55001 183 aa13.49□□□□□ -0.25
SSH3-201ENST00000308127 PMCHL1Q16048 86 aa13.49□□□□□ -0.25
SSH3-201ENST00000308127 ZNF474Q6S9Z5 364 aaPredicted RBP13.49□□□□□ -0.25
SSH3-201ENST00000308127 TXN2Q99757 166 aa13.49□□□□□ -0.25
SSH3-201ENST00000308127 ZGRF1Q86YA3 2104 aa13.49□□□□□ -0.25
SSH3-201ENST00000308127 SH2D7A6NKC9 451 aaPredicted RBP13.48□□□□□ -0.25
SSH3-201ENST00000308127 UPK2O00526 184 aa13.48□□□□□ -0.25
SSH3-201ENST00000308127 TOX4O94842 621 aa13.48□□□□□ -0.25
SSH3-201ENST00000308127 ZNF883P0CG24 379 aa13.48□□□□□ -0.25
SSH3-201ENST00000308127 RAB7AP51149 207 aa13.48□□□□□ -0.25
SSH3-201ENST00000308127 RPL8P62917 257 aaKnown RBP13.48□□□□□ -0.25
SSH3-201ENST00000308127 Q0VG73 95 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms