RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 ZNF672Q499Z4 452 aaPredicted RBP14.42□□□□□ -0.1
SHANK1-201ENST00000293441 COL5A1-AS1Q5SY13 56 aa14.42□□□□□ -0.1
SHANK1-201ENST00000293441 TRBV6-7A0A0A0MS04 114 aa14.42□□□□□ -0.1
SHANK1-201ENST00000293441 SRSF6Q13247 344 aaKnown RBP14.42□□□□□ -0.1
SHANK1-201ENST00000293441 CACNG8Q8WXS5 425 aa14.42□□□□□ -0.1
SHANK1-201ENST00000293441 AHCTF1Q8WYP5 2266 aa14.42□□□□□ -0.1
SHANK1-201ENST00000293441 IGKV1D-13A0A0B4J2D9 117 aa14.42□□□□□ -0.1
SHANK1-201ENST00000293441 IGKV1-13P0DP09 117 aa14.42□□□□□ -0.1
SHANK1-201ENST00000293441 TOMM7Q9P0U1 55 aa14.42□□□□□ -0.1
SHANK1-201ENST00000293441 TRAV14DV4A0A0A6YYC5 116 aa14.41□□□□□ -0.1
SHANK1-201ENST00000293441 CD7P09564 240 aa14.41□□□□□ -0.1
SHANK1-201ENST00000293441 PAX1P15863 534 aa14.41□□□□□ -0.1
SHANK1-201ENST00000293441 ZNF385CQ66K41 422 aaPredicted RBP14.41□□□□□ -0.1
SHANK1-201ENST00000293441 TIMP3P35625 211 aa14.41□□□□□ -0.1
SHANK1-201ENST00000293441 ESPL1Q14674 2120 aa14.41□□□□□ -0.1
SHANK1-201ENST00000293441 TCF21O43680 179 aa14.41□□□□□ -0.1
SHANK1-201ENST00000293441 WNT2P09544 360 aa14.41□□□□□ -0.1
SHANK1-201ENST00000293441 ERASQ7Z444 233 aa14.41□□□□□ -0.1
SHANK1-201ENST00000293441 GTSCR1Q86UQ5 136 aa14.41□□□□□ -0.1
SHANK1-201ENST00000293441 A0A087WV48 116 aa14.41□□□□□ -0.1
SHANK1-201ENST00000293441 VMO1Q7Z5L0 202 aa14.41□□□□□ -0.1
SHANK1-201ENST00000293441 WFDC12Q8WWY7 111 aa14.41□□□□□ -0.1
SHANK1-201ENST00000293441 GAGE10A6NGK3 116 aa14.4□□□□□ -0.1
SHANK1-201ENST00000293441 C15orf61A6NNL5 157 aa14.4□□□□□ -0.1
SHANK1-201ENST00000293441 FOXG1P55316 489 aaPredicted RBP14.4□□□□□ -0.1
SHANK1-201ENST00000293441 C3orf36Q3SXR2 165 aa14.4□□□□□ -0.1
SHANK1-201ENST00000293441 GNG5P63218 68 aa14.4□□□□□ -0.1
SHANK1-201ENST00000293441 SLC25A34Q6PIV7 304 aa14.4□□□□□ -0.1
SHANK1-201ENST00000293441 TDGF1P13385 188 aa14.4□□□□□ -0.1
SHANK1-201ENST00000293441 GGNQ86UU5 652 aa14.4□□□□□ -0.1
SHANK1-201ENST00000293441 CXorf65A6NEN9 183 aa14.4□□□□□ -0.1
SHANK1-201ENST00000293441 ZNF506Q5JVG8 444 aa14.4□□□□□ -0.1
SHANK1-201ENST00000293441 FER1L6-AS1Q8NA97 138 aa14.4□□□□□ -0.1
SHANK1-201ENST00000293441 RPP21Q9H633 154 aaKnown RBP14.4□□□□□ -0.1
SHANK1-201ENST00000293441 ZNF585BQ52M93 769 aa14.4□□□□□ -0.1
SHANK1-201ENST00000293441 TMEM219Q86XT9 240 aa14.4□□□□□ -0.1
SHANK1-201ENST00000293441 SCGB3A1Q96QR1 104 aa14.4□□□□□ -0.1
SHANK1-201ENST00000293441 DSCR9P59020 149 aa14.39□□□□□ -0.11
SHANK1-201ENST00000293441 IGKV1-9A0A0C4DH69 117 aa14.39□□□□□ -0.11
SHANK1-201ENST00000293441 KLRD1Q13241 179 aa14.39□□□□□ -0.11
SHANK1-201ENST00000293441 NHLRC3Q5JS37 347 aa14.39□□□□□ -0.11
SHANK1-201ENST00000293441 LEPP41159 167 aa14.39□□□□□ -0.11
SHANK1-201ENST00000293441 TMEM136Q6ZRR5 245 aa14.39□□□□□ -0.11
SHANK1-201ENST00000293441 IL36BQ9NZH7 164 aa14.39□□□□□ -0.11
SHANK1-201ENST00000293441 TRAV8-6A0A0B4J262 113 aa14.39□□□□□ -0.11
SHANK1-201ENST00000293441 APOHP02749 345 aaPredicted RBP14.39□□□□□ -0.11
SHANK1-201ENST00000293441 SOD3P08294 240 aa14.39□□□□□ -0.11
SHANK1-201ENST00000293441 Q0VFX4 171 aa14.39□□□□□ -0.11
SHANK1-201ENST00000293441 C12orf54Q6X4T0 127 aa14.39□□□□□ -0.11
SHANK1-201ENST00000293441 ZNF414Q96IQ9 312 aa14.39□□□□□ -0.11
SHANK1-201ENST00000293441 A0A0G2JNJ9 132 aa14.38□□□□□ -0.11
SHANK1-201ENST00000293441 C18orf12Q96KH6 178 aa14.38□□□□□ -0.11
SHANK1-201ENST00000293441 ZNF319Q9P2F9 582 aa14.38□□□□□ -0.11
SHANK1-201ENST00000293441 Q9UFV3 132 aa14.38□□□□□ -0.11
SHANK1-201ENST00000293441 A0A1B0GUT8 65 aa14.38□□□□□ -0.11
SHANK1-201ENST00000293441 PLSCR4Q9NRQ2 329 aa14.38□□□□□ -0.11
SHANK1-201ENST00000293441 IGKV3D-20A0A0C4DH25 116 aa14.38□□□□□ -0.11
SHANK1-201ENST00000293441 KCNS1Q96KK3 526 aa14.38□□□□□ -0.11
SHANK1-201ENST00000293441 UQCR10Q9UDW1 63 aa14.38□□□□□ -0.11
SHANK1-201ENST00000293441 TMEM250H0YL14 139 aa14.38□□□□□ -0.11
SHANK1-201ENST00000293441 LINC00271P0C7V0 271 aa14.38□□□□□ -0.11
SHANK1-201ENST00000293441 LYPD3O95274 346 aa14.38□□□□□ -0.11
SHANK1-201ENST00000293441 RNF125Q96EQ8 232 aa14.38□□□□□ -0.11
SHANK1-201ENST00000293441 CD55P08174 381 aa14.37□□□□□ -0.11
SHANK1-201ENST00000293441 DNAL4O96015 105 aa14.37□□□□□ -0.11
SHANK1-201ENST00000293441 SAMD13Q5VXD3 122 aa14.37□□□□□ -0.11
SHANK1-201ENST00000293441 ZNF525Q8N782 197 aa14.37□□□□□ -0.11
SHANK1-201ENST00000293441 OTORQ9NRC9 128 aa14.37□□□□□ -0.11
SHANK1-201ENST00000293441 VENTXO95231 258 aa14.37□□□□□ -0.11
SHANK1-201ENST00000293441 PRB4P10163 310 aaPredicted RBP14.37□□□□□ -0.11
SHANK1-201ENST00000293441 EFNA4P52798 201 aa14.37□□□□□ -0.11
SHANK1-201ENST00000293441 OR5AN1Q8NGI8 311 aa14.37□□□□□ -0.11
SHANK1-201ENST00000293441 CACNG7P62955 275 aa14.37□□□□□ -0.11
SHANK1-201ENST00000293441 PVRIGQ6DKI7 326 aa14.36□□□□□ -0.11
SHANK1-201ENST00000293441 IL18BPO95998 194 aa14.36□□□□□ -0.11
SHANK1-201ENST00000293441 MALP21145 153 aa14.36□□□□□ -0.11
SHANK1-201ENST00000293441 IMMP2LQ96T52 175 aa14.36□□□□□ -0.11
SHANK1-201ENST00000293441 MLNRO43193 412 aa14.36□□□□□ -0.11
SHANK1-201ENST00000293441 OR9G9P0C7N8 305 aa14.36□□□□□ -0.11
SHANK1-201ENST00000293441 CD33P20138 364 aa14.36□□□□□ -0.11
SHANK1-201ENST00000293441 PAQR4Q8N4S7 273 aaPredicted RBP14.36□□□□□ -0.11
SHANK1-201ENST00000293441 GTF3AQ92664 365 aaKnown RBP14.36□□□□□ -0.11
SHANK1-201ENST00000293441 ERVH48-1M5A8F1 160 aa14.36□□□□□ -0.11
SHANK1-201ENST00000293441 CCL1P22362 96 aa14.36□□□□□ -0.11
SHANK1-201ENST00000293441 TMEM144Q7Z5S9 345 aa14.36□□□□□ -0.11
SHANK1-201ENST00000293441 SDHCQ99643 169 aaPredicted RBP14.36□□□□□ -0.11
SHANK1-201ENST00000293441 IGHV2-26A0A0B4J1V2 119 aa14.36□□□□□ -0.11
SHANK1-201ENST00000293441 FBLN7Q53RD9 439 aa14.36□□□□□ -0.11
SHANK1-201ENST00000293441 OR10J3Q5JRS4 329 aa14.36□□□□□ -0.11
SHANK1-201ENST00000293441 CIARTQ8N365 385 aaPredicted RBP14.36□□□□□ -0.11
SHANK1-201ENST00000293441 SLC25A28Q96A46 364 aa14.36□□□□□ -0.11
SHANK1-201ENST00000293441 EFNA2O43921 213 aa14.35□□□□□ -0.11
SHANK1-201ENST00000293441 CFAP161Q6P656 301 aa14.35□□□□□ -0.11
SHANK1-201ENST00000293441 FOXC2Q99958 501 aa14.35□□□□□ -0.11
SHANK1-201ENST00000293441 OR11H12B2RN74 326 aa14.35□□□□□ -0.11
SHANK1-201ENST00000293441 PAX8Q06710 450 aa14.35□□□□□ -0.11
SHANK1-201ENST00000293441 OR11H1Q8NG94 326 aa14.35□□□□□ -0.11
SHANK1-201ENST00000293441 OR11H2Q8NH07 326 aa14.35□□□□□ -0.11
SHANK1-201ENST00000293441 SELLP14151 372 aa14.35□□□□□ -0.11
SHANK1-201ENST00000293441 TMEM200BQ69YZ2 307 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms