RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 PSG2P11465 335 aa15.54■□□□□ 0.08
COL4A3BP-201ENST00000261415 COX6B1P14854 86 aa15.54■□□□□ 0.08
COL4A3BP-201ENST00000261415 C19orf35Q6ZS72 473 aa15.54■□□□□ 0.08
COL4A3BP-201ENST00000261415 CCL17Q92583 94 aa15.54■□□□□ 0.08
COL4A3BP-201ENST00000261415 UHRF2Q96PU4 802 aa15.54■□□□□ 0.08
COL4A3BP-201ENST00000261415 RAB1BQ9H0U4 201 aa15.54■□□□□ 0.08
COL4A3BP-201ENST00000261415 C17orf112F2Z3M2 114 aa15.53■□□□□ 0.08
COL4A3BP-201ENST00000261415 ZNF205O95201 554 aa15.53■□□□□ 0.08
COL4A3BP-201ENST00000261415 CFAP161Q6P656 301 aa15.53■□□□□ 0.08
COL4A3BP-201ENST00000261415 IGKV1D-17A0A075B6S4 117 aa15.52■□□□□ 0.08
COL4A3BP-201ENST00000261415 TMEM178BH3BS89 294 aa15.52■□□□□ 0.08
COL4A3BP-201ENST00000261415 HBG1P69891 147 aa15.52■□□□□ 0.08
COL4A3BP-201ENST00000261415 HBG2P69892 147 aa15.52■□□□□ 0.08
COL4A3BP-201ENST00000261415 CD177Q8N6Q3 437 aa15.52■□□□□ 0.08
COL4A3BP-201ENST00000261415 TACC2O95359 2948 aa15.52■□□□□ 0.08
COL4A3BP-201ENST00000261415 TRBV9A0A0B4J1U6 114 aa15.52■□□□□ 0.07
COL4A3BP-201ENST00000261415 RIPPLY3P57055 190 aa15.52■□□□□ 0.07
COL4A3BP-201ENST00000261415 OR4F17Q8NGA8 305 aa15.52■□□□□ 0.07
COL4A3BP-201ENST00000261415 TIMM9Q9Y5J7 89 aa15.52■□□□□ 0.07
COL4A3BP-201ENST00000261415 DOCK11Q5JSL3 2073 aa15.51■□□□□ 0.07
COL4A3BP-201ENST00000261415 CTXND1A0A1B0GTU2 59 aa15.51■□□□□ 0.07
COL4A3BP-201ENST00000261415 OOEPA6NGQ2 149 aa15.51■□□□□ 0.07
COL4A3BP-201ENST00000261415 PSPNO60542 156 aa15.51■□□□□ 0.07
COL4A3BP-201ENST00000261415 PRDX2P32119 198 aa15.51■□□□□ 0.07
COL4A3BP-201ENST00000261415 AMTP48728 403 aa15.51■□□□□ 0.07
COL4A3BP-201ENST00000261415 OR10J3Q5JRS4 329 aa15.51■□□□□ 0.07
COL4A3BP-201ENST00000261415 TEX36Q5VZQ5 186 aa15.51■□□□□ 0.07
COL4A3BP-201ENST00000261415 STUMQ69YW2 141 aa15.51■□□□□ 0.07
COL4A3BP-201ENST00000261415 ZNF525Q8N782 197 aa15.51■□□□□ 0.07
COL4A3BP-201ENST00000261415 SFRP2Q96HF1 295 aa15.51■□□□□ 0.07
COL4A3BP-201ENST00000261415 METRNQ9UJH8 293 aa15.51■□□□□ 0.07
COL4A3BP-201ENST00000261415 RNF114Q9Y508 228 aa15.51■□□□□ 0.07
COL4A3BP-201ENST00000261415 S1PR2O95136 353 aa15.51■□□□□ 0.07
COL4A3BP-201ENST00000261415 SCGB1A1P11684 91 aa15.51■□□□□ 0.07
COL4A3BP-201ENST00000261415 PAX2Q02962 417 aa15.51■□□□□ 0.07
COL4A3BP-201ENST00000261415 MDFIC2A0A1B0GVS7 189 aa15.5■□□□□ 0.07
COL4A3BP-201ENST00000261415 TAX1BP3O14907 124 aa15.5■□□□□ 0.07
COL4A3BP-201ENST00000261415 TNFSF12O43508 249 aa15.5■□□□□ 0.07
COL4A3BP-201ENST00000261415 PDE6DO43924 150 aa15.5■□□□□ 0.07
COL4A3BP-201ENST00000261415 HLA-DRB5Q30154 266 aa15.5■□□□□ 0.07
COL4A3BP-201ENST00000261415 TBC1D26Q86UD7 250 aa15.5■□□□□ 0.07
COL4A3BP-201ENST00000261415 RPP25LQ8N5L8 163 aaKnown RBP15.5■□□□□ 0.07
COL4A3BP-201ENST00000261415 DEFB108BQ8NET1 73 aa15.5■□□□□ 0.07
COL4A3BP-201ENST00000261415 KCNS1Q96KK3 526 aa15.5■□□□□ 0.07
COL4A3BP-201ENST00000261415 WDR61Q9GZS3 305 aaKnown RBP15.5■□□□□ 0.07
COL4A3BP-201ENST00000261415 NAPSAO96009 420 aa15.5■□□□□ 0.07
COL4A3BP-201ENST00000261415 TMEM267Q0VDI3 215 aaPredicted RBP15.5■□□□□ 0.07
COL4A3BP-201ENST00000261415 Q6ZPA2 131 aa15.5■□□□□ 0.07
COL4A3BP-201ENST00000261415 NEU4Q8WWR8 484 aaPredicted RBP15.5■□□□□ 0.07
COL4A3BP-201ENST00000261415 LYNX1G3V0Z9 82 aa15.49■□□□□ 0.07
COL4A3BP-201ENST00000261415 PPYP01298 95 aa15.49■□□□□ 0.07
COL4A3BP-201ENST00000261415 LYNX1P0DP58 116 aa15.49■□□□□ 0.07
COL4A3BP-201ENST00000261415 SLC25A6P12236 298 aa15.49■□□□□ 0.07
COL4A3BP-201ENST00000261415 CBLN1P23435 193 aa15.49■□□□□ 0.07
COL4A3BP-201ENST00000261415 COL8A2P25067 703 aa15.49■□□□□ 0.07
COL4A3BP-201ENST00000261415 C20orf204Q6ZNR8 217 aa15.49■□□□□ 0.07
COL4A3BP-201ENST00000261415 PPIAL4EA0A075B759 164 aa15.48■□□□□ 0.07
COL4A3BP-201ENST00000261415 TRAV9-2A0A087WT02 112 aa15.48■□□□□ 0.07
COL4A3BP-201ENST00000261415 PPIAL4DF5H284 164 aa15.48■□□□□ 0.07
COL4A3BP-201ENST00000261415 G3V4G9 280 aa15.48■□□□□ 0.07
COL4A3BP-201ENST00000261415 OR7C2O60412 319 aa15.48■□□□□ 0.07
COL4A3BP-201ENST00000261415 LY6HO94772 140 aa15.48■□□□□ 0.07
COL4A3BP-201ENST00000261415 C3orf79P0CE67 100 aa15.48■□□□□ 0.07
COL4A3BP-201ENST00000261415 PPIAL4FP0DN26 164 aa15.48■□□□□ 0.07
COL4A3BP-201ENST00000261415 AMMECR1LQ6DCA0 310 aa15.48■□□□□ 0.07
COL4A3BP-201ENST00000261415 BORCS7Q96B45 105 aa15.48■□□□□ 0.07
COL4A3BP-201ENST00000261415 TRAV38-1A0A0B4J264 116 aa15.48■□□□□ 0.07
COL4A3BP-201ENST00000261415 FCN1O00602 326 aa15.48■□□□□ 0.07
COL4A3BP-201ENST00000261415 RBFOX2O43251 390 aaKnown RBP eCLIP15.48■□□□□ 0.07
COL4A3BP-201ENST00000261415 DEFB125Q8N687 156 aa15.48■□□□□ 0.07
COL4A3BP-201ENST00000261415 CENPEQ02224 2701 aa15.48■□□□□ 0.07
COL4A3BP-201ENST00000261415 LOC102724200A0A096LPH7 203 aaPredicted RBP15.47■□□□□ 0.07
COL4A3BP-201ENST00000261415 A0A1B0GV72 72 aa15.47■□□□□ 0.07
COL4A3BP-201ENST00000261415 ZNF90Q03938 601 aa15.47■□□□□ 0.07
COL4A3BP-201ENST00000261415 OR4P4Q8NGL7 312 aa15.47■□□□□ 0.07
COL4A3BP-201ENST00000261415 TAF15Q92804 592 aaKnown RBP eCLIP15.47■□□□□ 0.07
COL4A3BP-201ENST00000261415 WNT10AQ9GZT5 417 aa15.47■□□□□ 0.07
COL4A3BP-201ENST00000261415 SMPXQ9UHP9 88 aa15.47■□□□□ 0.07
COL4A3BP-201ENST00000261415 CELSR2Q9HCU4 2923 aa15.47■□□□□ 0.07
COL4A3BP-201ENST00000261415 GCN1Q92616 2671 aaKnown RBP15.47■□□□□ 0.07
COL4A3BP-201ENST00000261415 ZNF324O75467 553 aaPredicted RBP15.47■□□□□ 0.07
COL4A3BP-201ENST00000261415 COL8A1P27658 744 aa15.47■□□□□ 0.07
COL4A3BP-201ENST00000261415 SAMD13Q5VXD3 122 aa15.47■□□□□ 0.07
COL4A3BP-201ENST00000261415 ZNF497Q6ZNH5 498 aa15.47■□□□□ 0.07
COL4A3BP-201ENST00000261415 ZNRF1Q8ND25 227 aa15.47■□□□□ 0.07
COL4A3BP-201ENST00000261415 C11orf94C9JXX5 98 aa15.46■□□□□ 0.07
COL4A3BP-201ENST00000261415 H3BP45 60 aa15.46■□□□□ 0.07
COL4A3BP-201ENST00000261415 PAGE4O60829 102 aa15.46■□□□□ 0.07
COL4A3BP-201ENST00000261415 ZNF788Q6ZQV5 615 aa15.46■□□□□ 0.07
COL4A3BP-201ENST00000261415 ZNF295-AS1Q8N0V1 137 aa15.46■□□□□ 0.07
COL4A3BP-201ENST00000261415 GAPTQ8N292 157 aa15.46■□□□□ 0.07
COL4A3BP-201ENST00000261415 OR10P1Q8NGE3 313 aa15.46■□□□□ 0.07
COL4A3BP-201ENST00000261415 OR5D13Q8NGL4 314 aa15.46■□□□□ 0.07
COL4A3BP-201ENST00000261415 IGFBPL1Q8WX77 278 aa15.46■□□□□ 0.07
COL4A3BP-201ENST00000261415 TMEM186Q96B77 213 aa15.46■□□□□ 0.07
COL4A3BP-201ENST00000261415 GAFA1Q96PS6 74 aa15.46■□□□□ 0.07
COL4A3BP-201ENST00000261415 GNB4Q9HAV0 340 aa15.46■□□□□ 0.07
COL4A3BP-201ENST00000261415 OVOL3O00110 214 aa15.46■□□□□ 0.06
COL4A3BP-201ENST00000261415 RHOBP62745 196 aa15.46■□□□□ 0.06
COL4A3BP-201ENST00000261415 CCL13Q99616 98 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms