RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 TMEM242Q9NWH2 141 aa4.07□□□□□ -1.76
RC3H1-201ENST00000258349 PPIAL4CA0A0B4J2A2 164 aa4.07□□□□□ -1.76
RC3H1-201ENST00000258349 A0A0G2JLM5 398 aa4.07□□□□□ -1.76
RC3H1-201ENST00000258349 PPIAL4GP0DN37 164 aa4.07□□□□□ -1.76
RC3H1-201ENST00000258349 RNF182Q8N6D2 247 aa4.07□□□□□ -1.76
RC3H1-201ENST00000258349 ASCL2Q99929 193 aa4.07□□□□□ -1.76
RC3H1-201ENST00000258349 RPRMQ9NS64 109 aa4.07□□□□□ -1.76
RC3H1-201ENST00000258349 TMEM74BQ9NUR3 256 aa4.07□□□□□ -1.76
RC3H1-201ENST00000258349 CREBBPQ92793 2442 aa4.07□□□□□ -1.76
RC3H1-201ENST00000258349 TRAV9-2A0A087WT02 112 aa4.07□□□□□ -1.76
RC3H1-201ENST00000258349 TRAV8-6A0A0B4J262 113 aa4.07□□□□□ -1.76
RC3H1-201ENST00000258349 A0A1W2PQF6 199 aa4.07□□□□□ -1.76
RC3H1-201ENST00000258349 DPM2O94777 84 aa4.07□□□□□ -1.76
RC3H1-201ENST00000258349 THY1P04216 161 aa4.07□□□□□ -1.76
RC3H1-201ENST00000258349 ABHD12Q8N2K0 398 aa4.07□□□□□ -1.76
RC3H1-201ENST00000258349 ANAPC13Q9BS18 74 aa4.07□□□□□ -1.76
RC3H1-201ENST00000258349 SLC25A2Q9BXI2 301 aa4.07□□□□□ -1.76
RC3H1-201ENST00000258349 LOC101059948A0A1B0GTJ6 334 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 CD69Q07108 199 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 Q6ZT83 130 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 ARPC1AQ92747 370 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 NDUFAF3Q9BU61 184 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 IGKV1D-42A0A075B6H8 117 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 NKX2-8O15522 239 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 RAMP1O60894 148 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 TEX45Q8NA69 505 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 NRN1Q9NPD7 142 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 F8VVB4 439 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 F8VWA3 439 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 CTHRC1Q96CG8 243 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 KLF4O43474 513 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 CGAP01215 116 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 PPBPP02775 128 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 UCP1P25874 307 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 SIGMAR1Q99720 223 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 IFI27L2Q9H2X8 130 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 NXT2Q9NPJ8 142 aaKnown RBP4.06□□□□□ -1.76
RC3H1-201ENST00000258349 SMIM10L1P0DMW3 83 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 COX6B1P14854 86 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 RPL39P5Q59GN2 51 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 FAM71F2Q6NXP2 309 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 C19orf48Q6RUI8 117 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 ZNF826PQ6ZT77 177 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 ZNF784Q8NCA9 323 aaPredicted RBP4.06□□□□□ -1.76
RC3H1-201ENST00000258349 SMIM10Q96HG1 83 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 AMELYQ99218 206 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 OVOL2Q9BRP0 275 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 C1QTNF5Q9BXJ0 243 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 SEMA5BQ9P283 1151 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 MUC4Q99102 2169 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 SLC17A3O00476 420 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 MOSP00540 346 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 NBEAP1P0C6P0 100 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 CSRP3P50461 194 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 ERVK11-1P61568 191 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 IGLV3-21P80748 117 aaPredicted RBP4.06□□□□□ -1.76
RC3H1-201ENST00000258349 SRSF7Q16629 238 aaKnown RBP eCLIP4.06□□□□□ -1.76
RC3H1-201ENST00000258349 Q5BKY6 102 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 TIMM23BQ5SRD1 257 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 ZFAND6Q6FIF0 208 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 TTC9CQ8N5M4 171 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 FAM57AQ8TBR7 257 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 DCTN5Q9BTE1 182 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 ZNF257Q9Y2Q1 563 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 LINC00469Q8N7U9 141 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 FER1L6-AS1Q8NA97 138 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 C18orf15Q96N68 181 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 A0A1B0GTI1 187 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 PLNP26678 52 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 TFPI2P48307 235 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 PDLIM4P50479 330 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 PRSS53Q2L4Q9 553 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 FBLN7Q53RD9 439 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 TPRX1Q8N7U7 411 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 PHLDA1Q8WV24 401 aaPredicted RBP4.06□□□□□ -1.76
RC3H1-201ENST00000258349 SSBP3Q9BWW4 388 aaPredicted RBP4.06□□□□□ -1.76
RC3H1-201ENST00000258349 TRAV8-4A0A0B4J246 113 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 PIN1P1O15428 100 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 HIST1H2BKO60814 126 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 HIST1H2BJP06899 126 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 HIST1H2BOP23527 126 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 HIST1H2BBP33778 126 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 HIST1H2BDP58876 126 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 HIST1H2BCP62807 126 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 HIST2H2BEQ16778 126 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 ORMDL2Q53FV1 153 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.06□□□□□ -1.76
RC3H1-201ENST00000258349 LINC01590Q5TEZ4 76 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 ZNF497Q6ZNH5 498 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 HIST1H2BHQ93079 126 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 HIST1H2BNQ99877 126 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 HIST1H2BMQ99879 126 aa4.06□□□□□ -1.76
RC3H1-201ENST00000258349 F2Z2F3 143 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 SRSF1Q07955 248 aaKnown RBP eCLIP4.05□□□□□ -1.76
RC3H1-201ENST00000258349 PRDM13Q9H4Q3 707 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 WBP1LQ9NX94 342 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 LAMTOR2Q9Y2Q5 125 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 IGKV3D-11A0A0A0MRZ8 115 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 IGHV3-72A0A0B4J1Y9 119 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 SERF1AO75920 110 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms