RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 VMO1Q7Z5L0 202 aa11.09□□□□□ -0.63
COL1A1-201ENST00000225964 FAM89BQ8N5H3 189 aa11.09□□□□□ -0.63
COL1A1-201ENST00000225964 OTORQ9NRC9 128 aa11.09□□□□□ -0.63
COL1A1-201ENST00000225964 KIR3DL3Q8N743 410 aa11.08□□□□□ -0.64
COL1A1-201ENST00000225964 VCX2Q9H322 139 aa11.08□□□□□ -0.64
COL1A1-201ENST00000225964 IGHV1-18A0A0C4DH31 117 aa11.08□□□□□ -0.64
COL1A1-201ENST00000225964 MRPS18CQ9Y3D5 142 aaKnown RBP11.08□□□□□ -0.64
COL1A1-201ENST00000225964 ZNF236Q9UL36 1845 aa11.08□□□□□ -0.64
COL1A1-201ENST00000225964 RPL35AP18077 110 aaKnown RBP11.08□□□□□ -0.64
COL1A1-201ENST00000225964 CSRP1P21291 193 aaKnown RBP11.08□□□□□ -0.64
COL1A1-201ENST00000225964 ATP5G3P48201 142 aa11.08□□□□□ -0.64
COL1A1-201ENST00000225964 IGHV4-39P01824 125 aa11.08□□□□□ -0.64
COL1A1-201ENST00000225964 IFI27P40305 119 aaPredicted RBP11.08□□□□□ -0.64
COL1A1-201ENST00000225964 ZP1P60852 638 aa11.08□□□□□ -0.64
COL1A1-201ENST00000225964 CXorf65A6NEN9 183 aa11.08□□□□□ -0.64
COL1A1-201ENST00000225964 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.08□□□□□ -0.64
COL1A1-201ENST00000225964 PRB4P10163 310 aaPredicted RBP11.08□□□□□ -0.64
COL1A1-201ENST00000225964 PLPPR1Q8TBJ4 325 aa11.08□□□□□ -0.64
COL1A1-201ENST00000225964 DICER1Q9UPY3 1922 aaKnown RBP11.08□□□□□ -0.64
COL1A1-201ENST00000225964 TGFBR3LH3BV60 316 aa11.07□□□□□ -0.64
COL1A1-201ENST00000225964 SSC4DQ8WTU2 575 aa11.07□□□□□ -0.64
COL1A1-201ENST00000225964 E9PLN8 166 aa11.07□□□□□ -0.64
COL1A1-201ENST00000225964 NMBP08949 121 aa11.07□□□□□ -0.64
COL1A1-201ENST00000225964 TMEM219Q86XT9 240 aa11.07□□□□□ -0.64
COL1A1-201ENST00000225964 ST6GALNAC6Q969X2 333 aa11.07□□□□□ -0.64
COL1A1-201ENST00000225964 IMMP2LQ96T52 175 aa11.07□□□□□ -0.64
COL1A1-201ENST00000225964 VKORC1Q9BQB6 163 aa11.07□□□□□ -0.64
COL1A1-201ENST00000225964 UPK2O00526 184 aa11.07□□□□□ -0.64
COL1A1-201ENST00000225964 CD8AP01732 235 aa11.07□□□□□ -0.64
COL1A1-201ENST00000225964 TDGF1P3P51864 188 aa11.07□□□□□ -0.64
COL1A1-201ENST00000225964 PSMG4Q5JS54 123 aa11.07□□□□□ -0.64
COL1A1-201ENST00000225964 CIARTQ8N365 385 aaPredicted RBP11.07□□□□□ -0.64
COL1A1-201ENST00000225964 CHCHD5Q9BSY4 110 aa11.07□□□□□ -0.64
COL1A1-201ENST00000225964 TRGV11A0A075B6L2 103 aa11.07□□□□□ -0.64
COL1A1-201ENST00000225964 PQLC2LA1A4F0 135 aa11.07□□□□□ -0.64
COL1A1-201ENST00000225964 LILRA1O75019 489 aa11.07□□□□□ -0.64
COL1A1-201ENST00000225964 SDHCQ99643 169 aaPredicted RBP11.07□□□□□ -0.64
COL1A1-201ENST00000225964 SLC50A1Q9BRV3 221 aa11.07□□□□□ -0.64
COL1A1-201ENST00000225964 MYOFQ9NZM1 2061 aa11.06□□□□□ -0.64
COL1A1-201ENST00000225964 SIGLEC15Q6ZMC9 328 aa11.06□□□□□ -0.64
COL1A1-201ENST00000225964 FAM166AQ6J272 317 aa11.06□□□□□ -0.64
COL1A1-201ENST00000225964 IMMP1LQ96LU5 166 aa11.06□□□□□ -0.64
COL1A1-201ENST00000225964 CD28P10747 220 aa11.06□□□□□ -0.64
COL1A1-201ENST00000225964 PAX8Q06710 450 aa11.06□□□□□ -0.64
COL1A1-201ENST00000225964 TRAV21A0A0B4J279 112 aa11.06□□□□□ -0.64
COL1A1-201ENST00000225964 TIMM23O14925 209 aa11.06□□□□□ -0.64
COL1A1-201ENST00000225964 RCC1LQ96I51 464 aaKnown RBP11.06□□□□□ -0.64
COL1A1-201ENST00000225964 CHD5Q8TDI0 1954 aa11.06□□□□□ -0.64
COL1A1-201ENST00000225964 COL4A1P02462 1669 aa11.06□□□□□ -0.64
COL1A1-201ENST00000225964 DPRXA6NFQ7 191 aa11.06□□□□□ -0.64
COL1A1-201ENST00000225964 CDK2AP2O75956 126 aa11.06□□□□□ -0.64
COL1A1-201ENST00000225964 TTC9CQ8N5M4 171 aa11.06□□□□□ -0.64
COL1A1-201ENST00000225964 PRADC1Q9BSG0 188 aa11.06□□□□□ -0.64
COL1A1-201ENST00000225964 EVI2AP22794 236 aa11.06□□□□□ -0.64
COL1A1-201ENST00000225964 PVRIGQ6DKI7 326 aa11.05□□□□□ -0.64
COL1A1-201ENST00000225964 ORMDL3Q8N138 153 aa11.05□□□□□ -0.64
COL1A1-201ENST00000225964 FABP5P3A8MUU1 101 aa11.05□□□□□ -0.64
COL1A1-201ENST00000225964 PPIFP30405 207 aaKnown RBP11.05□□□□□ -0.64
COL1A1-201ENST00000225964 FXYD7P58549 80 aa11.05□□□□□ -0.64
COL1A1-201ENST00000225964 KLRD1Q13241 179 aa11.05□□□□□ -0.64
COL1A1-201ENST00000225964 OR5A1Q8NGJ0 315 aa11.05□□□□□ -0.64
COL1A1-201ENST00000225964 RNF125Q96EQ8 232 aa11.05□□□□□ -0.64
COL1A1-201ENST00000225964 NEUROG1Q92886 237 aa11.05□□□□□ -0.64
COL1A1-201ENST00000225964 ASCL2Q99929 193 aa11.05□□□□□ -0.64
COL1A1-201ENST00000225964 LRRC37AA6NMS7 1700 aa11.05□□□□□ -0.64
COL1A1-201ENST00000225964 PINLYPA6NC86 204 aa11.05□□□□□ -0.64
COL1A1-201ENST00000225964 CACNG8Q8WXS5 425 aa11.05□□□□□ -0.64
COL1A1-201ENST00000225964 MRPL14Q6P1L8 145 aaKnown RBP11.05□□□□□ -0.64
COL1A1-201ENST00000225964 SBF2Q86WG5 1849 aa11.05□□□□□ -0.64
COL1A1-201ENST00000225964 IGHV3-73A0A0B4J1V6 119 aa11.04□□□□□ -0.64
COL1A1-201ENST00000225964 IZUMO1RA6ND01 250 aa11.04□□□□□ -0.64
COL1A1-201ENST00000225964 MORN2Q502X0 79 aa11.04□□□□□ -0.64
COL1A1-201ENST00000225964 LHFPL4Q7Z7J7 247 aa11.04□□□□□ -0.64
COL1A1-201ENST00000225964 TRAV41A0A0B4J266 112 aa11.04□□□□□ -0.64
COL1A1-201ENST00000225964 YPEL1O60688 119 aa11.04□□□□□ -0.64
COL1A1-201ENST00000225964 EFNB1P98172 346 aa11.04□□□□□ -0.64
COL1A1-201ENST00000225964 YPEL2Q96QA6 119 aa11.04□□□□□ -0.64
COL1A1-201ENST00000225964 IGHV3-64A0A075B6Q5 118 aa11.04□□□□□ -0.64
COL1A1-201ENST00000225964 NAT1P18440 290 aa11.04□□□□□ -0.64
COL1A1-201ENST00000225964 IFITM3Q01628 133 aa11.04□□□□□ -0.64
COL1A1-201ENST00000225964 ZNF600Q6ZNG1 722 aa11.04□□□□□ -0.64
COL1A1-201ENST00000225964 ARID2Q68CP9 1835 aa11.04□□□□□ -0.64
COL1A1-201ENST00000225964 VENTXO95231 258 aa11.04□□□□□ -0.64
COL1A1-201ENST00000225964 CD200R1LQ6Q8B3 271 aa11.04□□□□□ -0.64
COL1A1-201ENST00000225964 C14orf144Q96I85 54 aa11.04□□□□□ -0.64
COL1A1-201ENST00000225964 C15orf61A6NNL5 157 aa11.03□□□□□ -0.64
COL1A1-201ENST00000225964 RIPPLY3P57055 190 aa11.03□□□□□ -0.64
COL1A1-201ENST00000225964 A0A1B0GW15 77 aa11.03□□□□□ -0.64
COL1A1-201ENST00000225964 HIGD1CA8MV81 97 aa11.03□□□□□ -0.64
COL1A1-201ENST00000225964 TYMSP04818 313 aa11.03□□□□□ -0.64
COL1A1-201ENST00000225964 OR9G9P0C7N8 305 aa11.03□□□□□ -0.64
COL1A1-201ENST00000225964 Q6AWC8 147 aa11.03□□□□□ -0.64
COL1A1-201ENST00000225964 ZNF257Q9Y2Q1 563 aa11.03□□□□□ -0.64
COL1A1-201ENST00000225964 S100A7L2Q5SY68 101 aa11.03□□□□□ -0.64
COL1A1-201ENST00000225964 RAMP3O60896 148 aa11.03□□□□□ -0.64
COL1A1-201ENST00000225964 IGLV3-19P01714 112 aa11.03□□□□□ -0.64
COL1A1-201ENST00000225964 IGHV1-46P01743 117 aa11.03□□□□□ -0.64
COL1A1-201ENST00000225964 PAX2Q02962 417 aa11.03□□□□□ -0.64
COL1A1-201ENST00000225964 SEPSECSQ9HD40 501 aaKnown RBP11.03□□□□□ -0.64
COL1A1-201ENST00000225964 ZNF497Q6ZNH5 498 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms