RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 ID3Q02535 119 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 HSD52Q0P140 79 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 ECSCRQ19T08 205 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 TTC9CQ8N5M4 171 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 GEMIN7Q9H840 131 aaKnown RBP3.72□□□□□ -1.81
CHD9-201ENST00000219084 DOCK10Q96BY6 2186 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 PGPEP1LA6NFU8 196 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 HIGD1CA8MV81 97 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 PLNP26678 52 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 NUTF2P61970 127 aaKnown RBP3.72□□□□□ -1.81
CHD9-201ENST00000219084 MBNL2Q5VZF2 373 aaKnown RBP3.72□□□□□ -1.81
CHD9-201ENST00000219084 TSKUQ8WUA8 353 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 RPP25Q9BUL9 199 aaKnown RBP3.72□□□□□ -1.81
CHD9-201ENST00000219084 ITGB1BP1O14713 200 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 LYPD3O95274 346 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 TMEM171Q8WVE6 324 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 REG4Q9BYZ8 158 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 HS3ST3B1Q9Y662 390 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 LOC102723996A0A087X1L8 192 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 LOXL3P58215 753 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 C10orf126Q8N4M7 172 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 OR5AN1Q8NGI8 311 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 SPSB2Q99619 263 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 MYO9AB2RTY4 2548 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 HBDP02042 147 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 GPX1P07203 203 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 GPR183P32249 361 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 GFRA1P56159 465 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 C3AR1Q16581 482 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 ZNF841Q6ZN19 808 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 ABHD12Q8N2K0 398 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 TMEM101Q96IK0 257 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 TIMP3P35625 211 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 PRCDQ00LT1 54 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 SRSF1Q07955 248 aaKnown RBP eCLIP3.72□□□□□ -1.81
CHD9-201ENST00000219084 C3orf36Q3SXR2 165 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 FAM159AQ6UWV7 190 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 HIST3H2BBQ8N257 126 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 SLC25A45Q8N413 288 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 TEX45Q8NA69 505 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 ITLN1Q8WWA0 313 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 CCL13Q99616 98 aa3.72□□□□□ -1.81
CHD9-201ENST00000219084 SSBP4Q9BWG4 385 aaPredicted RBP3.72□□□□□ -1.81
CHD9-201ENST00000219084 PPIAL4CA0A0B4J2A2 164 aa3.71□□□□□ -1.81
CHD9-201ENST00000219084 PPIAL4GP0DN37 164 aa3.71□□□□□ -1.81
CHD9-201ENST00000219084 MYOD1P15172 320 aa3.71□□□□□ -1.81
CHD9-201ENST00000219084 FCGR2BP31994 310 aaPredicted RBP3.71□□□□□ -1.81
CHD9-201ENST00000219084 CT83Q5H943 113 aa3.71□□□□□ -1.81
CHD9-201ENST00000219084 C1orf194Q5T5A4 169 aa3.71□□□□□ -1.81
CHD9-201ENST00000219084 FAM169BQ8N8A8 192 aa3.71□□□□□ -1.81
CHD9-201ENST00000219084 NRN1Q9NPD7 142 aa3.71□□□□□ -1.81
CHD9-201ENST00000219084 TRBV20OR9-2A0A075B6H5 130 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 LOC105371242A0A075B767 164 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 SHISA3A0PJX4 238 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 FAM90A27PA6NNH2 459 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 COLCA2A8K830 154 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 LINC00587B1AMM8 73 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 MMP23AO75900 390 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 AGFG2O95081 481 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 TMEM50AO95807 157 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 LEPP41159 167 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 C10orf91Q5T1B1 145 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 GOLT1AQ6ZVE7 132 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 HIST1H2BLQ99880 126 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 SLC25A39Q9BZJ4 359 aaPredicted RBP3.71□□□□□ -1.82
CHD9-201ENST00000219084 FAM231BA6NCW3 169 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 DPM2O94777 84 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 CCL4P13236 92 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 TMEM74BQ9NUR3 256 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 IGHV1-69-2A0A0G2JMI3 117 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 OOSP1A8MZH6 123 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 ZIC3O60481 467 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 PLPPR2Q96GM1 343 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 C12orf77C9JDV5 145 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 NPFFO15130 113 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 MOSP00540 346 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 CA1P00915 261 aaPredicted RBP3.71□□□□□ -1.82
CHD9-201ENST00000219084 FGF11Q92914 225 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 EAF1Q96JC9 268 aaPredicted RBP3.71□□□□□ -1.82
CHD9-201ENST00000219084 TRGV9Q99603 122 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 Q9H3A6 140 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 EFEMP2O95967 443 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 PDE6HQ13956 83 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 ZIC4Q8N9L1 334 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 FER1L6-AS1Q8NA97 138 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 NEU1Q99519 415 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 A0A1W2PR77 199 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 C8orf46Q8TAG6 207 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 DDB2Q92466 427 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 ARPC1AQ92747 370 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 IMMP1LQ96LU5 166 aa3.71□□□□□ -1.82
CHD9-201ENST00000219084 SCO2A0A1W2PP80 73 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 UPK2O00526 184 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 APOHP02749 345 aaPredicted RBP3.7□□□□□ -1.82
CHD9-201ENST00000219084 CMC4P56277 68 aaPredicted RBP3.7□□□□□ -1.82
CHD9-201ENST00000219084 TEX38Q6PEX7 206 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 AURKAIP1Q9NWT8 199 aaPredicted RBP3.7□□□□□ -1.82
CHD9-201ENST00000219084 FAM181BA6NEQ2 426 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 RRHO14718 337 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 TSPAN13O95857 204 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms