RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 SULT1A4P0DMN0 295 aa13.25□□□□□ -0.29
MRPL28-201ENST00000199706 GPR183P32249 361 aa13.25□□□□□ -0.29
MRPL28-201ENST00000199706 SNCAP37840 140 aa13.25□□□□□ -0.29
MRPL28-201ENST00000199706 CCR6P51684 374 aa13.25□□□□□ -0.29
MRPL28-201ENST00000199706 SUB1P53999 127 aaKnown RBP eCLIP13.25□□□□□ -0.295e-8■■■■■ 37.7
MRPL28-201ENST00000199706 ELLP55199 621 aaPredicted RBP13.25□□□□□ -0.29
MRPL28-201ENST00000199706 TMED4Q7Z7H5 227 aa13.25□□□□□ -0.29
MRPL28-201ENST00000199706 GPR146Q96CH1 333 aa13.25□□□□□ -0.29
MRPL28-201ENST00000199706 ZNF436Q9C0F3 470 aaPredicted RBP13.25□□□□□ -0.29
MRPL28-201ENST00000199706 BATF3Q9NR55 127 aa13.25□□□□□ -0.29
MRPL28-201ENST00000199706 COL7A1Q02388 2944 aa13.24□□□□□ -0.29
MRPL28-201ENST00000199706 F8W735 103 aaPredicted RBP13.24□□□□□ -0.29
MRPL28-201ENST00000199706 OR2C1O95371 312 aa13.24□□□□□ -0.29
MRPL28-201ENST00000199706 IGHV3-23P01764 117 aa13.24□□□□□ -0.29
MRPL28-201ENST00000199706 SLC25A6P12236 298 aa13.24□□□□□ -0.29
MRPL28-201ENST00000199706 HOXA1P49639 335 aaPredicted RBP13.24□□□□□ -0.29
MRPL28-201ENST00000199706 PLET1Q6UQ28 207 aa13.24□□□□□ -0.29
MRPL28-201ENST00000199706 S100ZQ8WXG8 99 aa13.24□□□□□ -0.29
MRPL28-201ENST00000199706 MARC2Q969Z3 335 aa13.24□□□□□ -0.29
MRPL28-201ENST00000199706 PALMDQ9NP74 551 aa13.24□□□□□ -0.29
MRPL28-201ENST00000199706 ENY2Q9NPA8 101 aa13.24□□□□□ -0.29
MRPL28-201ENST00000199706 PTTG2Q9NZH5 202 aa13.24□□□□□ -0.29
MRPL28-201ENST00000199706 A0A1B0GU03 582 aa13.23□□□□□ -0.29
MRPL28-201ENST00000199706 C2orf70A6NJV1 201 aa13.23□□□□□ -0.29
MRPL28-201ENST00000199706 RNASE2P10153 161 aaKnown RBP13.23□□□□□ -0.29
MRPL28-201ENST00000199706 GP9P14770 177 aa13.23□□□□□ -0.29
MRPL28-201ENST00000199706 SPNP16150 400 aa13.23□□□□□ -0.29
MRPL28-201ENST00000199706 BTCP35070 178 aa13.23□□□□□ -0.29
MRPL28-201ENST00000199706 HTR2BP41595 481 aa13.23□□□□□ -0.29
MRPL28-201ENST00000199706 SMCO1Q147U7 214 aa13.23□□□□□ -0.29
MRPL28-201ENST00000199706 LCN12Q6JVE5 192 aa13.23□□□□□ -0.29
MRPL28-201ENST00000199706 PRR25Q96S07 402 aa13.23□□□□□ -0.29
MRPL28-201ENST00000199706 TECRQ9NZ01 308 aaKnown RBP13.23□□□□□ -0.29
MRPL28-201ENST00000199706 S4R3C0 116 aa13.23□□□□□ -0.29
MRPL28-201ENST00000199706 TMEM213A2RRL7 107 aa13.22□□□□□ -0.29
MRPL28-201ENST00000199706 SFT2D2O95562 160 aa13.22□□□□□ -0.29
MRPL28-201ENST00000199706 MFAP4P55083 255 aa13.22□□□□□ -0.29
MRPL28-201ENST00000199706 PPP1R1AQ13522 171 aa13.22□□□□□ -0.29
MRPL28-201ENST00000199706 LYZL2Q7Z4W2 148 aa13.22□□□□□ -0.29
MRPL28-201ENST00000199706 TMEM190Q8WZ59 177 aa13.22□□□□□ -0.29
MRPL28-201ENST00000199706 B9D2Q9BPU9 175 aa13.22□□□□□ -0.29
MRPL28-201ENST00000199706 ZC4H2Q9NQZ6 224 aa13.22□□□□□ -0.29
MRPL28-201ENST00000199706 HSPB7Q9UBY9 170 aa13.22□□□□□ -0.29
MRPL28-201ENST00000199706 TMED3Q9Y3Q3 217 aa13.22□□□□□ -0.29
MRPL28-201ENST00000199706 NDUFA4O00483 81 aa13.21□□□□□ -0.29
MRPL28-201ENST00000199706 MT-CO2P00403 227 aa13.21□□□□□ -0.29
MRPL28-201ENST00000199706 C8orf88P0DMB2 117 aa13.21□□□□□ -0.29
MRPL28-201ENST00000199706 FOLR2P14207 255 aa13.21□□□□□ -0.29
MRPL28-201ENST00000199706 VAMP1P23763 118 aa13.21□□□□□ -0.29
MRPL28-201ENST00000199706 ATP5IP56385 69 aaPredicted RBP13.21□□□□□ -0.29
MRPL28-201ENST00000199706 TNFRSF9Q07011 255 aa13.21□□□□□ -0.29
MRPL28-201ENST00000199706 ADAMTSL5Q6ZMM2 481 aa13.21□□□□□ -0.29
MRPL28-201ENST00000199706 NOXA1Q86UR1 476 aa13.21□□□□□ -0.29
MRPL28-201ENST00000199706 MISP3Q96FF7 219 aa13.21□□□□□ -0.29
MRPL28-201ENST00000199706 UFC1Q9Y3C8 167 aa13.21□□□□□ -0.29
MRPL28-201ENST00000199706 OR2T8A6NH00 312 aa13.2□□□□□ -0.3
MRPL28-201ENST00000199706 FAM90A26D6RGX4 464 aa13.2□□□□□ -0.3
MRPL28-201ENST00000199706 PITX3O75364 302 aa13.2□□□□□ -0.3
MRPL28-201ENST00000199706 CTSGP08311 255 aa13.2□□□□□ -0.3
MRPL28-201ENST00000199706 ADMP35318 185 aa13.2□□□□□ -0.3
MRPL28-201ENST00000199706 RELQ04864 619 aaPredicted RBP13.2□□□□□ -0.3
MRPL28-201ENST00000199706 ANKRD55Q3KP44 614 aa13.2□□□□□ -0.3
MRPL28-201ENST00000199706 C2orf83Q53S99 150 aa13.2□□□□□ -0.3
MRPL28-201ENST00000199706 SPINK9Q5DT21 86 aa13.2□□□□□ -0.3
MRPL28-201ENST00000199706 PRR13Q9NZ81 148 aa13.2□□□□□ -0.3
MRPL28-201ENST00000199706 PLA2G10O15496 165 aa13.19□□□□□ -0.3
MRPL28-201ENST00000199706 NUPL2O15504 423 aaKnown RBP13.19□□□□□ -0.3
MRPL28-201ENST00000199706 LYRM1O43325 122 aa13.19□□□□□ -0.3
MRPL28-201ENST00000199706 LY86O95711 162 aa13.19□□□□□ -0.3
MRPL28-201ENST00000199706 CBLN1P23435 193 aa13.19□□□□□ -0.3
MRPL28-201ENST00000199706 NPBWR1P48145 328 aa13.19□□□□□ -0.3
MRPL28-201ENST00000199706 Q56UQ5 140 aa13.19□□□□□ -0.3
MRPL28-201ENST00000199706 UNQ9165/PRO28630Q6UXU0 137 aa13.19□□□□□ -0.3
MRPL28-201ENST00000199706 DUSP18Q8NEJ0 188 aa13.19□□□□□ -0.3
MRPL28-201ENST00000199706 SLC24A4Q8NFF2 622 aa13.19□□□□□ -0.3
MRPL28-201ENST00000199706 RNASEH2CQ8TDP1 164 aaKnown RBP13.19□□□□□ -0.3
MRPL28-201ENST00000199706 HEYLQ9NQ87 328 aaPredicted RBP13.19□□□□□ -0.3
MRPL28-201ENST00000199706 DAZ1Q9NQZ3 744 aaKnown RBP13.19□□□□□ -0.3
MRPL28-201ENST00000199706 MRPL27Q9P0M9 148 aaKnown RBP13.19□□□□□ -0.3
MRPL28-201ENST00000199706 SMAD5-AS1Q9Y6J3 95 aa13.19□□□□□ -0.3
MRPL28-201ENST00000199706 ZNF320A2RRD8 509 aa13.18□□□□□ -0.3
MRPL28-201ENST00000199706 C9orf170A2RU37 121 aa13.18□□□□□ -0.3
MRPL28-201ENST00000199706 C15orf62A8K5M9 175 aa13.18□□□□□ -0.3
MRPL28-201ENST00000199706 CEBPZOSA8MTT3 80 aa13.18□□□□□ -0.3
MRPL28-201ENST00000199706 A8MZ25 164 aa13.18□□□□□ -0.3
MRPL28-201ENST00000199706 K7EMT4 169 aa13.18□□□□□ -0.3
MRPL28-201ENST00000199706 DEFB114Q30KQ6 69 aa13.18□□□□□ -0.3
MRPL28-201ENST00000199706 DEFB121Q5J5C9 76 aa13.18□□□□□ -0.3
MRPL28-201ENST00000199706 DYNLRB2Q8TF09 96 aa13.18□□□□□ -0.3
MRPL28-201ENST00000199706 CHRDL1Q9BU40 450 aa13.18□□□□□ -0.3
MRPL28-201ENST00000199706 WDR12Q9GZL7 423 aaKnown RBP13.18□□□□□ -0.3
MRPL28-201ENST00000199706 HIPK2Q9H2X6 1198 aa13.18□□□□□ -0.3
MRPL28-201ENST00000199706 U3KQ87 197 aa13.18□□□□□ -0.3
MRPL28-201ENST00000199706 RPS10-NUDT3A0A1W2PQS6 291 aa13.17□□□□□ -0.3
MRPL28-201ENST00000199706 SCGB2A1O75556 95 aa13.17□□□□□ -0.3
MRPL28-201ENST00000199706 DHRS2Q13268 280 aa13.17□□□□□ -0.3
MRPL28-201ENST00000199706 LYG2Q86SG7 212 aa13.17□□□□□ -0.3
MRPL28-201ENST00000199706 HAPLN4Q86UW8 402 aa13.17□□□□□ -0.3
MRPL28-201ENST00000199706 OR4X1Q8NH49 305 aa13.17□□□□□ -0.3
MRPL28-201ENST00000199706 PINX1Q96BK5 328 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms