RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 RPUSD1Q9UJJ7 312 aaKnown RBP19.3■□□□□ 0.68
TARBP1-201ENST00000040877 INTS1Q8N201 2190 aaKnown RBP19.3■□□□□ 0.68
TARBP1-201ENST00000040877 SRP19P09132 144 aaKnown RBP19.3■□□□□ 0.68
TARBP1-201ENST00000040877 PLP1P60201 277 aa19.3■□□□□ 0.68
TARBP1-201ENST00000040877 C20orf204Q6ZNR8 217 aa19.3■□□□□ 0.68
TARBP1-201ENST00000040877 TMEM190Q8WZ59 177 aa19.3■□□□□ 0.68
TARBP1-201ENST00000040877 OTORQ9NRC9 128 aa19.3■□□□□ 0.68
TARBP1-201ENST00000040877 NPFFO15130 113 aa19.29■□□□□ 0.68
TARBP1-201ENST00000040877 ID3Q02535 119 aa19.29■□□□□ 0.68
TARBP1-201ENST00000040877 EFNA4P52798 201 aa19.29■□□□□ 0.68
TARBP1-201ENST00000040877 SLC25A15Q9Y619 301 aa19.29■□□□□ 0.68
TARBP1-201ENST00000040877 ACACAQ13085 2346 aa19.29■□□□□ 0.68
TARBP1-201ENST00000040877 WFIKKN1Q96NZ8 548 aa19.29■□□□□ 0.68
TARBP1-201ENST00000040877 HEATR5BQ9P2D3 2071 aa19.29■□□□□ 0.68
TARBP1-201ENST00000040877 MBD3L4A6NDZ8 208 aaPredicted RBP19.29■□□□□ 0.68
TARBP1-201ENST00000040877 MBD3L3A6NE82 208 aaPredicted RBP19.29■□□□□ 0.68
TARBP1-201ENST00000040877 MBD3L5A6NJ08 208 aaPredicted RBP19.29■□□□□ 0.68
TARBP1-201ENST00000040877 BTCP35070 178 aa19.29■□□□□ 0.68
TARBP1-201ENST00000040877 TMEM183AQ8IXX5 376 aa19.29■□□□□ 0.68
TARBP1-201ENST00000040877 MBD3L2Q8NHZ7 208 aaPredicted RBP19.29■□□□□ 0.68
TARBP1-201ENST00000040877 ESPL1Q14674 2120 aa19.28■□□□□ 0.68
TARBP1-201ENST00000040877 A0A1B0GUT8 65 aa19.28■□□□□ 0.68
TARBP1-201ENST00000040877 EGR1P18146 543 aa19.28■□□□□ 0.68
TARBP1-201ENST00000040877 UQCRFS1P47985 274 aa19.28■□□□□ 0.68
TARBP1-201ENST00000040877 TUBA4BQ9H853 241 aa19.28■□□□□ 0.68
TARBP1-201ENST00000040877 SIP14410 1827 aa19.28■□□□□ 0.68
TARBP1-201ENST00000040877 TRAV14DV4A0A0A6YYC5 116 aa19.28■□□□□ 0.68
TARBP1-201ENST00000040877 FAM166AQ6J272 317 aa19.28■□□□□ 0.68
TARBP1-201ENST00000040877 GEMIN7Q9H840 131 aaKnown RBP19.28■□□□□ 0.68
TARBP1-201ENST00000040877 IGKV3-20P01619 116 aa19.28■□□□□ 0.68
TARBP1-201ENST00000040877 IGHG3P01860 377 aa19.28■□□□□ 0.68
TARBP1-201ENST00000040877 ZNF672Q499Z4 452 aaPredicted RBP19.28■□□□□ 0.68
TARBP1-201ENST00000040877 OR4D5Q8NGN0 318 aa19.28■□□□□ 0.68
TARBP1-201ENST00000040877 S4R3C0 116 aa19.28■□□□□ 0.68
TARBP1-201ENST00000040877 IGHV3-49A0A0A0MS15 119 aa19.28■□□□□ 0.68
TARBP1-201ENST00000040877 OOSP1A8MZH6 123 aa19.28■□□□□ 0.68
TARBP1-201ENST00000040877 SLC25A34Q6PIV7 304 aa19.28■□□□□ 0.68
TARBP1-201ENST00000040877 ANK1P16157 1881 aa19.28■□□□□ 0.68
TARBP1-201ENST00000040877 NCOR1O75376 2440 aa19.27■□□□□ 0.68
TARBP1-201ENST00000040877 PRSS8Q16651 343 aa19.27■□□□□ 0.68
TARBP1-201ENST00000040877 Q6ZS92 163 aa19.27■□□□□ 0.68
TARBP1-201ENST00000040877 MIR17HGQ75NE6 70 aa19.27■□□□□ 0.68
TARBP1-201ENST00000040877 KIAA1644Q3SXP7 199 aa19.27■□□□□ 0.68
TARBP1-201ENST00000040877 RPP21Q9H633 154 aaKnown RBP19.27■□□□□ 0.68
TARBP1-201ENST00000040877 H3BVH4 76 aa19.27■□□□□ 0.67
TARBP1-201ENST00000040877 VDAC2P45880 294 aaPredicted RBP19.27■□□□□ 0.67
TARBP1-201ENST00000040877 Q9H3A6 140 aa19.27■□□□□ 0.67
TARBP1-201ENST00000040877 IGKV1-12A0A0C4DH73 117 aa19.26■□□□□ 0.67
TARBP1-201ENST00000040877 IGKV1D-12P01611 117 aa19.26■□□□□ 0.67
TARBP1-201ENST00000040877 HEPN1Q6WQI6 88 aa19.26■□□□□ 0.67
TARBP1-201ENST00000040877 RIF1Q5UIP0 2472 aaKnown RBP19.26■□□□□ 0.67
TARBP1-201ENST00000040877 OR9G9P0C7N8 305 aa19.26■□□□□ 0.67
TARBP1-201ENST00000040877 TCTAP57738 103 aa19.26■□□□□ 0.67
TARBP1-201ENST00000040877 ZCCHC24Q8N2G6 241 aaKnown RBP19.26■□□□□ 0.67
TARBP1-201ENST00000040877 ZSWIM8A7E2V4 1837 aa19.26■□□□□ 0.67
TARBP1-201ENST00000040877 FABP2P12104 132 aa19.26■□□□□ 0.67
TARBP1-201ENST00000040877 FOXG1P55316 489 aaPredicted RBP19.26■□□□□ 0.67
TARBP1-201ENST00000040877 PMCHL2Q9BQD1 86 aa19.26■□□□□ 0.67
TARBP1-201ENST00000040877 KIF26BQ2KJY2 2108 aa19.26■□□□□ 0.67
TARBP1-201ENST00000040877 A0A087WWC5 75 aa19.25■□□□□ 0.67
TARBP1-201ENST00000040877 A0A0A6YYD4 124 aa19.25■□□□□ 0.67
TARBP1-201ENST00000040877 RNF125Q96EQ8 232 aa19.25■□□□□ 0.67
TARBP1-201ENST00000040877 TNFRSF18Q9Y5U5 241 aa19.25■□□□□ 0.67
TARBP1-201ENST00000040877 TCRBV4S1A1TA0A5B7 111 aa19.25■□□□□ 0.67
TARBP1-201ENST00000040877 C19orf67A6NJJ6 358 aa19.25■□□□□ 0.67
TARBP1-201ENST00000040877 ADIPOQQ15848 244 aa19.25■□□□□ 0.67
TARBP1-201ENST00000040877 SMIM12Q96EX1 92 aa19.25■□□□□ 0.67
TARBP1-201ENST00000040877 GFI1Q99684 422 aa19.25■□□□□ 0.67
TARBP1-201ENST00000040877 RNF126Q9BV68 326 aa19.25■□□□□ 0.67
TARBP1-201ENST00000040877 SCO2A0A1W2PP80 73 aa19.25■□□□□ 0.67
TARBP1-201ENST00000040877 RNF5Q99942 180 aa19.25■□□□□ 0.67
TARBP1-201ENST00000040877 ZNF257Q9Y2Q1 563 aa19.25■□□□□ 0.67
TARBP1-201ENST00000040877 C9JCJ5 164 aa19.25■□□□□ 0.67
TARBP1-201ENST00000040877 IGHV3-66A0A0C4DH42 116 aa19.24■□□□□ 0.67
TARBP1-201ENST00000040877 A0A087WV48 116 aa19.24■□□□□ 0.67
TARBP1-201ENST00000040877 TIMM23O14925 209 aa19.24■□□□□ 0.67
TARBP1-201ENST00000040877 PSMG4Q5JS54 123 aa19.24■□□□□ 0.67
TARBP1-201ENST00000040877 FAM169BQ8N8A8 192 aa19.24■□□□□ 0.67
TARBP1-201ENST00000040877 ITLN2Q8WWU7 325 aaPredicted RBP19.24■□□□□ 0.67
TARBP1-201ENST00000040877 ASCL2Q99929 193 aa19.24■□□□□ 0.67
TARBP1-201ENST00000040877 METRNQ9UJH8 293 aa19.24■□□□□ 0.67
TARBP1-201ENST00000040877 PRELID3AQ96N28 172 aa19.24■□□□□ 0.67
TARBP1-201ENST00000040877 WNT2P09544 360 aa19.24■□□□□ 0.67
TARBP1-201ENST00000040877 TMEM136Q6ZRR5 245 aa19.24■□□□□ 0.67
TARBP1-201ENST00000040877 SDF2L1Q9HCN8 221 aa19.23■□□□□ 0.67
TARBP1-201ENST00000040877 LYNX1G3V0Z9 82 aa19.23■□□□□ 0.67
TARBP1-201ENST00000040877 LYNX1P0DP58 116 aa19.23■□□□□ 0.67
TARBP1-201ENST00000040877 JOSD1Q15040 202 aaPredicted RBP19.23■□□□□ 0.67
TARBP1-201ENST00000040877 ST6GALNAC3Q8NDV1 305 aa19.23■□□□□ 0.67
TARBP1-201ENST00000040877 KCNS1Q96KK3 526 aa19.23■□□□□ 0.67
TARBP1-201ENST00000040877 MRPS16Q9Y3D3 137 aaKnown RBP19.23■□□□□ 0.67
TARBP1-201ENST00000040877 GRIFINA4D1Z8 144 aa19.23■□□□□ 0.67
TARBP1-201ENST00000040877 M0R381 172 aa19.23■□□□□ 0.67
TARBP1-201ENST00000040877 DUX3Q96PT4 197 aa19.23■□□□□ 0.67
TARBP1-201ENST00000040877 A0A1W2PRE2 83 aa19.23■□□□□ 0.67
TARBP1-201ENST00000040877 RAMP3O60896 148 aa19.23■□□□□ 0.67
TARBP1-201ENST00000040877 CBLN1P23435 193 aa19.23■□□□□ 0.67
TARBP1-201ENST00000040877 ATP5G3P48201 142 aa19.23■□□□□ 0.67
TARBP1-201ENST00000040877 RHOGP84095 191 aa19.22■□□□□ 0.67
TARBP1-201ENST00000040877 MINOS1Q5TGZ0 78 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms