RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 PAX1P15863 534 aa11.43□□□□□ -0.58
RTFDC1-201ENST00000023939 CD81P60033 236 aa11.43□□□□□ -0.58
RTFDC1-201ENST00000023939 RHOBP62745 196 aa11.43□□□□□ -0.58
RTFDC1-201ENST00000023939 ETFRF1Q6IPR1 90 aa11.43□□□□□ -0.58
RTFDC1-201ENST00000023939 TMEM88Q6PEY1 159 aa11.43□□□□□ -0.58
RTFDC1-201ENST00000023939 Q8N6K4 173 aa11.43□□□□□ -0.58
RTFDC1-201ENST00000023939 THAP8Q8NA92 274 aa11.43□□□□□ -0.58
RTFDC1-201ENST00000023939 OR2T10Q8NGZ9 312 aa11.43□□□□□ -0.58
RTFDC1-201ENST00000023939 FAM168AQ92567 244 aa11.43□□□□□ -0.58
RTFDC1-201ENST00000023939 EAF1Q96JC9 268 aaPredicted RBP11.43□□□□□ -0.58
RTFDC1-201ENST00000023939 TMPRSS5Q9H3S3 457 aa11.43□□□□□ -0.58
RTFDC1-201ENST00000023939 FNDC4Q9H6D8 234 aaPredicted RBP11.43□□□□□ -0.58
RTFDC1-201ENST00000023939 TUBA4BQ9H853 241 aa11.43□□□□□ -0.58
RTFDC1-201ENST00000023939 SMCO4Q9NRQ5 59 aa11.43□□□□□ -0.58
RTFDC1-201ENST00000023939 TSPAN4O14817 238 aa11.43□□□□□ -0.58
RTFDC1-201ENST00000023939 HMGB3O15347 200 aaKnown RBP11.43□□□□□ -0.58
RTFDC1-201ENST00000023939 EIF3GO75821 320 aaKnown RBP eCLIP11.43□□□□□ -0.58
RTFDC1-201ENST00000023939 CXorf1O96002 111 aa11.43□□□□□ -0.58
RTFDC1-201ENST00000023939 OR10J1P30954 320 aa11.43□□□□□ -0.58
RTFDC1-201ENST00000023939 LGALS4P56470 323 aa11.43□□□□□ -0.58
RTFDC1-201ENST00000023939 MMDQ15546 238 aa11.43□□□□□ -0.58
RTFDC1-201ENST00000023939 MLANAQ16655 118 aa11.43□□□□□ -0.58
RTFDC1-201ENST00000023939 CBLN2Q8IUK8 224 aa11.43□□□□□ -0.58
RTFDC1-201ENST00000023939 SRSF12Q8WXF0 261 aaKnown RBP11.43□□□□□ -0.58
RTFDC1-201ENST00000023939 MALSU1Q96EH3 234 aa11.43□□□□□ -0.58
RTFDC1-201ENST00000023939 CFAP46Q8IYW2 2715 aa11.42□□□□□ -0.58
RTFDC1-201ENST00000023939 ZFYVE26Q68DK2 2539 aa11.42□□□□□ -0.58
RTFDC1-201ENST00000023939 M0R036 132 aa11.42□□□□□ -0.58
RTFDC1-201ENST00000023939 DEFA4P12838 97 aa11.42□□□□□ -0.58
RTFDC1-201ENST00000023939 AREGP15514 252 aa11.42□□□□□ -0.58
RTFDC1-201ENST00000023939 SSX2Q16385 188 aa11.42□□□□□ -0.58
RTFDC1-201ENST00000023939 NANPQ8TBE9 248 aa11.42□□□□□ -0.58
RTFDC1-201ENST00000023939 ABHD5Q8WTS1 349 aa11.42□□□□□ -0.58
RTFDC1-201ENST00000023939 TXNDC17Q9BRA2 123 aa11.42□□□□□ -0.58
RTFDC1-201ENST00000023939 NIPSNAP3BQ9BS92 247 aa11.42□□□□□ -0.58
RTFDC1-201ENST00000023939 LPAR2Q9HBW0 351 aa11.42□□□□□ -0.58
RTFDC1-201ENST00000023939 PUS1Q9Y606 427 aaKnown RBP eCLIP11.42□□□□□ -0.58
RTFDC1-201ENST00000023939 F11RQ9Y624 299 aaKnown RBP11.42□□□□□ -0.58
RTFDC1-201ENST00000023939 ARHGAP32A7KAX9 2087 aa11.42□□□□□ -0.58
RTFDC1-201ENST00000023939 FCN1O00602 326 aa11.41□□□□□ -0.58
RTFDC1-201ENST00000023939 MFAP2P55001 183 aa11.41□□□□□ -0.58
RTFDC1-201ENST00000023939 CYP2G1PQ6ZSU1 146 aa11.41□□□□□ -0.58
RTFDC1-201ENST00000023939 DYNAPQ8N1N2 210 aa11.41□□□□□ -0.58
RTFDC1-201ENST00000023939 OR2T6Q8NHC8 308 aa11.41□□□□□ -0.58
RTFDC1-201ENST00000023939 TVP23CQ96ET8 276 aa11.41□□□□□ -0.58
RTFDC1-201ENST00000023939 AJUBAQ96IF1 538 aa11.41□□□□□ -0.58
RTFDC1-201ENST00000023939 RPS10P5Q9NQ39 176 aa11.41□□□□□ -0.58
RTFDC1-201ENST00000023939 SELENOTP62341 195 aa11.4□□□□□ -0.58
RTFDC1-201ENST00000023939 PAX8Q06710 450 aa11.4□□□□□ -0.58
RTFDC1-201ENST00000023939 PNRC1Q12796 327 aaPredicted RBP11.4□□□□□ -0.58
RTFDC1-201ENST00000023939 PLGLAQ15195 96 aa11.4□□□□□ -0.58
RTFDC1-201ENST00000023939 C5orf64Q2M2E5 130 aa11.4□□□□□ -0.58
RTFDC1-201ENST00000023939 CLEC2AQ6UVW9 174 aa11.4□□□□□ -0.58
RTFDC1-201ENST00000023939 SPNS3Q6ZMD2 512 aa11.4□□□□□ -0.58
RTFDC1-201ENST00000023939 SEPSECSQ9HD40 501 aaKnown RBP11.4□□□□□ -0.58
RTFDC1-201ENST00000023939 IGKV1D-37A0A075B6S9 117 aa11.4□□□□□ -0.58
RTFDC1-201ENST00000023939 A0A087WWC5 75 aa11.4□□□□□ -0.58
RTFDC1-201ENST00000023939 A0A1W2PRD5 423 aa11.4□□□□□ -0.58
RTFDC1-201ENST00000023939 A0A1W2PRF3 423 aa11.4□□□□□ -0.58
RTFDC1-201ENST00000023939 A0A1W2PRM7 423 aa11.4□□□□□ -0.58
RTFDC1-201ENST00000023939 B4DEV8 164 aa11.4□□□□□ -0.58
RTFDC1-201ENST00000023939 PAGE4O60829 102 aa11.4□□□□□ -0.58
RTFDC1-201ENST00000023939 MT-CO2P00403 227 aa11.4□□□□□ -0.58
RTFDC1-201ENST00000023939 REG1AP05451 166 aa11.4□□□□□ -0.58
RTFDC1-201ENST00000023939 OR5G3P0C626 314 aa11.4□□□□□ -0.58
RTFDC1-201ENST00000023939 ARL14EPLP0DKL9 152 aa11.4□□□□□ -0.58
RTFDC1-201ENST00000023939 ATP5J2P56134 94 aa11.4□□□□□ -0.58
RTFDC1-201ENST00000023939 GNB1P62873 340 aa11.4□□□□□ -0.58
RTFDC1-201ENST00000023939 SRSF1Q07955 248 aaKnown RBP eCLIP11.4□□□□□ -0.58
RTFDC1-201ENST00000023939 TMEM116Q8NCL8 245 aa11.4□□□□□ -0.58
RTFDC1-201ENST00000023939 NPIPB3Q92617 1050 aa11.4□□□□□ -0.58
RTFDC1-201ENST00000023939 ACY3Q96HD9 319 aa11.4□□□□□ -0.58
RTFDC1-201ENST00000023939 RNF2Q99496 336 aa11.4□□□□□ -0.58
RTFDC1-201ENST00000023939 FUT9Q9Y231 359 aa11.4□□□□□ -0.58
RTFDC1-201ENST00000023939 IGHV4-61A0A0C4DH41 118 aa11.39□□□□□ -0.59
RTFDC1-201ENST00000023939 TCRBV4S1A1TA0A5B7 111 aa11.39□□□□□ -0.59
RTFDC1-201ENST00000023939 PSMB11A5LHX3 300 aa11.39□□□□□ -0.59
RTFDC1-201ENST00000023939 GCHFRP30047 84 aa11.39□□□□□ -0.59
RTFDC1-201ENST00000023939 CEBPGP53567 150 aa11.39□□□□□ -0.59
RTFDC1-201ENST00000023939 DSCR9P59020 149 aa11.39□□□□□ -0.59
RTFDC1-201ENST00000023939 C15orf54Q8N8G6 183 aa11.39□□□□□ -0.59
RTFDC1-201ENST00000023939 OR1L6Q8NGR2 347 aa11.39□□□□□ -0.59
RTFDC1-201ENST00000023939 GATAD1Q8WUU5 269 aa11.39□□□□□ -0.59
RTFDC1-201ENST00000023939 C20orf24Q9BUV8 137 aa11.39□□□□□ -0.59
RTFDC1-201ENST00000023939 ARL2-SNX15V9GYD0 113 aa11.39□□□□□ -0.59
RTFDC1-201ENST00000023939 PDE6DO43924 150 aa11.38□□□□□ -0.59
RTFDC1-201ENST00000023939 ZNF562Q6V9R5 426 aa11.38□□□□□ -0.59
RTFDC1-201ENST00000023939 C17orf50Q8WW18 174 aa11.38□□□□□ -0.59
RTFDC1-201ENST00000023939 C22orf15Q8WYQ4 148 aa11.38□□□□□ -0.59
RTFDC1-201ENST00000023939 TRGV9Q99603 122 aa11.38□□□□□ -0.59
RTFDC1-201ENST00000023939 MRPL32Q9BYC8 188 aaKnown RBP11.38□□□□□ -0.59
RTFDC1-201ENST00000023939 COLCA2A8K830 154 aa11.38□□□□□ -0.59
RTFDC1-201ENST00000023939 C11orf94C9JXX5 98 aa11.38□□□□□ -0.59
RTFDC1-201ENST00000023939 CLN5O75503 358 aa11.38□□□□□ -0.59
RTFDC1-201ENST00000023939 CNIH1O95406 144 aa11.38□□□□□ -0.59
RTFDC1-201ENST00000023939 FAM106CPP0CH98 169 aa11.38□□□□□ -0.59
RTFDC1-201ENST00000023939 COX6B1P14854 86 aa11.38□□□□□ -0.59
RTFDC1-201ENST00000023939 CTRB1P17538 263 aa11.38□□□□□ -0.59
RTFDC1-201ENST00000023939 RND2P52198 227 aa11.38□□□□□ -0.59
RTFDC1-201ENST00000023939 HES1Q14469 280 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms