RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Smim12Q78RX3 92 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 Olfr186Q8VEX5 309 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 Olfr223Q8VF69 319 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 Klf7Q99JB0 301 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 RTRAFQ9CQE8 244 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 Hint2Q9D0S9 163 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 Vstm2bQ9JME9 285 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 Prok2Q9QXU7 128 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 Olfr418A0A140T8J6 310 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 A0A1Y7VLU2 103 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 Fndc10A2A9Q0 223 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 Pira2F8VQ94 680 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 Cdhr4H3BJZ2 783 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 Gm20821J3QPJ2 227 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 Olfr895L7N210 316 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 Hsf1P38532 525 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 Tex52Q3TTI8 308 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 Gm5615Q3UW02 101 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 NmsQ5H8A1 153 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 Foxg1Q60987 481 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 ZpbpQ62522 350 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 Zdhhc25Q810M4 279 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 Fam214bQ8BR27 538 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 Fam234aQ8C0Z1 555 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 Gm5111Q8C9M4 190 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 Olfr507Q8VG13 316 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 Olfr715Q8VG49 315 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 Rbm7Q9CQT2 265 aaKnown RBP11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 Ndufb10Q9DCS9 176 aa11.44□□□□□ -0.58
Nup88-201ENSMUST00000035283 Olfr1329L7MTV4 313 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 Sc5dO88822 299 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 P01660 111 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 P01680 129 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 Ifna7P06799 190 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 Nudt10P0C027 164 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 Nudt11P0C028 164 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 Bcl2l2P70345 193 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 Tubg1P83887 451 aaKnown RBP11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 Mesp1P97309 243 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 Gpr183Q3U6B2 357 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 Defb46Q4QY34 57 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 Prss46Q5M8S2 314 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 Tmem106bQ80X71 275 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 Gm5447Q8BPB2 115 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 Cnot4Q8BT14 575 aaKnown RBP11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 SowahbQ8BZW2 760 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 Tmem212Q8C6V3 187 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 Olfr1394Q8VET2 312 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 Olfr1440Q8VFV4 315 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 Tspan2Q922J6 221 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 Slc50a1Q9CXK4 221 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 Kcnmb2Q9CZM9 235 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 1700069L16RikQ9D9H5 109 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 Rarres2Q9DD06 162 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 Ints1Q6P4S8 2195 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 Gm45871A0A1B0GRI9 540 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 TectbO08524 329 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 Tcstv1O70619 171 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 Iglc3P01845 104 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 AvpP35455 168 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 PmchP56942 165 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 Prdm6Q3UZD5 596 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 Lrtm2Q8BGX3 370 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 Vmn1r225Q8R2A5 298 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 Olfr281Q8VET6 311 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 Kcnip1Q9JJ57 227 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 NmuQ9QXK8 174 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 LenepQ9WVB6 61 aa11.43□□□□□ -0.58
Nup88-201ENSMUST00000035283 Ighv1-34A0A075B5V2 117 aa11.42□□□□□ -0.58
Nup88-201ENSMUST00000035283 Olfr1326-ps1A0A140T8J7 311 aa11.42□□□□□ -0.58
Nup88-201ENSMUST00000035283 Olfr224M9MMJ7 314 aa11.42□□□□□ -0.58
Nup88-201ENSMUST00000035283 Fut9O88819 359 aa11.42□□□□□ -0.58
Nup88-201ENSMUST00000035283 Cryba1P02525 198 aa11.42□□□□□ -0.58
Nup88-201ENSMUST00000035283 Ca5aP23589 299 aa11.42□□□□□ -0.58
Nup88-201ENSMUST00000035283 Tnfsf10P50592 291 aa11.42□□□□□ -0.58
Nup88-201ENSMUST00000035283 Sesn1P58006 492 aa11.42□□□□□ -0.58
Nup88-201ENSMUST00000035283 Pcbd1P61458 104 aa11.42□□□□□ -0.58
Nup88-201ENSMUST00000035283 Tle3Q08122 772 aaKnown RBP11.42□□□□□ -0.58
Nup88-201ENSMUST00000035283 PilraQ2YFS3 302 aa11.42□□□□□ -0.58
Nup88-201ENSMUST00000035283 Shisa6Q3UH99 525 aa11.42□□□□□ -0.58
Nup88-201ENSMUST00000035283 Tmem256Q5F285 113 aa11.42□□□□□ -0.58
Nup88-201ENSMUST00000035283 Cfhr1Q61406 343 aa11.42□□□□□ -0.58
Nup88-201ENSMUST00000035283 Onecut2Q6XBJ3 505 aa11.42□□□□□ -0.58
Nup88-201ENSMUST00000035283 Olfr43Q7TRX1 313 aa11.42□□□□□ -0.58
Nup88-201ENSMUST00000035283 Olfr403Q7TRX2 313 aa11.42□□□□□ -0.58
Nup88-201ENSMUST00000035283 Pitpnc1Q8K4R4 332 aa11.42□□□□□ -0.58
Nup88-201ENSMUST00000035283 Rab40cQ8VHQ4 281 aa11.42□□□□□ -0.58
Nup88-201ENSMUST00000035283 Rnps1Q99M28 305 aaKnown RBP11.42□□□□□ -0.58
Nup88-201ENSMUST00000035283 Map1lc3bQ9CQV6 125 aa11.42□□□□□ -0.58
Nup88-201ENSMUST00000035283 Tmem126bQ9D1R1 230 aa11.42□□□□□ -0.58
Nup88-201ENSMUST00000035283 Vax2Q9WTP9 292 aa11.42□□□□□ -0.58
Nup88-201ENSMUST00000035283 Col5a1O88207 1838 aa11.42□□□□□ -0.58
Nup88-201ENSMUST00000035283 Olfr175-ps1A0A140T8K4 308 aa11.42□□□□□ -0.58
Nup88-201ENSMUST00000035283 A0A286YD13 301 aa11.42□□□□□ -0.58
Nup88-201ENSMUST00000035283 Pglyrp3A1A547 347 aa11.42□□□□□ -0.58
Nup88-201ENSMUST00000035283 Gm5039J3QNT6 144 aa11.42□□□□□ -0.58
Nup88-201ENSMUST00000035283 Csn1s2bP02664 143 aa11.42□□□□□ -0.58
Nup88-201ENSMUST00000035283 Bcl2l15Q08ED0 167 aa11.42□□□□□ -0.58
Nup88-201ENSMUST00000035283 Psg27Q497W2 474 aa11.42□□□□□ -0.58
Nup88-201ENSMUST00000035283 Hspb6Q5EBG6 162 aa11.42□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 66 ms