RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 IGHV2-26A0A0B4J1V2 119 aa7.2□□□□□ -1.26
VCL-207ENST00000624354 SCO2A0A1W2PP80 73 aa7.2□□□□□ -1.26
VCL-207ENST00000624354 FAM90A9PA6NNJ1 464 aa7.2□□□□□ -1.26
VCL-207ENST00000624354 TIMP3P35625 211 aa7.2□□□□□ -1.26
VCL-207ENST00000624354 HTD2P86397 168 aa7.2□□□□□ -1.26
VCL-207ENST00000624354 C1orf185Q5T7R7 199 aa7.2□□□□□ -1.26
VCL-207ENST00000624354 PRR27Q6MZM9 219 aa7.2□□□□□ -1.26
VCL-207ENST00000624354 WDR82Q6UXN9 313 aa7.2□□□□□ -1.26
VCL-207ENST00000624354 PNKDQ8N490 385 aa7.2□□□□□ -1.26
VCL-207ENST00000624354 MDS2Q8NDY4 140 aa7.2□□□□□ -1.26
VCL-207ENST00000624354 TMEM204Q9BSN7 226 aa7.2□□□□□ -1.26
VCL-207ENST00000624354 LRFN3Q9BTN0 628 aa7.2□□□□□ -1.26
VCL-207ENST00000624354 GGTLC1Q9BX51 225 aa7.2□□□□□ -1.26
VCL-207ENST00000624354 MS4A5Q9H3V2 200 aa7.2□□□□□ -1.26
VCL-207ENST00000624354 GNG12Q9UBI6 72 aa7.2□□□□□ -1.26
VCL-207ENST00000624354 METRNQ9UJH8 293 aa7.2□□□□□ -1.26
VCL-207ENST00000624354 KMT2EQ8IZD2 1858 aa7.2□□□□□ -1.26
VCL-207ENST00000624354 LOC102724200A0A096LPH7 203 aaPredicted RBP7.2□□□□□ -1.26
VCL-207ENST00000624354 RRHO14718 337 aa7.2□□□□□ -1.26
VCL-207ENST00000624354 TIMM8AO60220 97 aaPredicted RBP7.2□□□□□ -1.26
VCL-207ENST00000624354 PSG1P11464 419 aa7.2□□□□□ -1.26
VCL-207ENST00000624354 ARG2P78540 354 aa7.2□□□□□ -1.26
VCL-207ENST00000624354 EDDM3AQ14507 147 aa7.2□□□□□ -1.26
VCL-207ENST00000624354 ERASQ7Z444 233 aa7.2□□□□□ -1.26
VCL-207ENST00000624354 OCC1Q8TAD7 63 aa7.2□□□□□ -1.26
VCL-207ENST00000624354 MGST2Q99735 147 aa7.2□□□□□ -1.26
VCL-207ENST00000624354 SPRR3Q9UBC9 169 aa7.2□□□□□ -1.26
VCL-207ENST00000624354 IGLC7A0M8Q6 106 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 WISP2O76076 250 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 HOXC12P31275 282 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 IER3P46695 156 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 RHOGP84095 191 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 OR52E5Q8NH55 327 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 PLPPR2Q96GM1 343 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 FAM234AQ9H0X4 552 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 GNB4Q9HAV0 340 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 IL19Q9UHD0 177 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 TRAV9-1A0A075B6T8 112 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 SNURFLB1AK76 121 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 M0R1X1 148 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 GFRA3O60609 400 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 MT-CO2P00403 227 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 THBS3P49746 956 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 PRRX1P54821 245 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 TMPRSS3P57727 454 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 TRIP6Q15654 476 aaKnown RBP7.19□□□□□ -1.26
VCL-207ENST00000624354 OR4A47Q6IF82 309 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 ATOH7Q8N100 152 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 ABHD12Q8N2K0 398 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 FER1L6-AS2Q96M78 137 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 DCTN5Q9BTE1 182 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 NPVFQ9HCQ7 196 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 MAP1AP78559 2803 aaPredicted RBP7.19□□□□□ -1.26
VCL-207ENST00000624354 C15orf65H3BRN8 121 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 PROP1O75360 226 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 C3orf79P0CE67 100 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 VDAC2P45880 294 aaPredicted RBP7.19□□□□□ -1.26
VCL-207ENST00000624354 RPL31P62899 125 aaKnown RBP7.19□□□□□ -1.26
VCL-207ENST00000624354 STUMQ69YW2 141 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 VKORC1L1Q8N0U8 176 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 SSMEM1Q8WWF3 244 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 BORCS7Q96B45 105 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 IL36BQ9NZH7 164 aa7.19□□□□□ -1.26
VCL-207ENST00000624354 TMEM238LA0A1B0GVL6 79 aa7.18□□□□□ -1.26
VCL-207ENST00000624354 CDX4O14627 284 aaPredicted RBP7.18□□□□□ -1.26
VCL-207ENST00000624354 TOX4O94842 621 aa7.18□□□□□ -1.26
VCL-207ENST00000624354 GCHFRP30047 84 aa7.18□□□□□ -1.26
VCL-207ENST00000624354 FABP6P51161 128 aa7.18□□□□□ -1.26
VCL-207ENST00000624354 RHOBP62745 196 aa7.18□□□□□ -1.26
VCL-207ENST00000624354 KCNS1Q96KK3 526 aa7.18□□□□□ -1.26
VCL-207ENST00000624354 UHRF2Q96PU4 802 aa7.18□□□□□ -1.26
VCL-207ENST00000624354 S1PR3Q99500 378 aa7.18□□□□□ -1.26
VCL-207ENST00000624354 JPT1Q9UK76 154 aa7.18□□□□□ -1.26
VCL-207ENST00000624354 CACNA1AO00555 2505 aa7.18□□□□□ -1.26
VCL-207ENST00000624354 PRSS46E5RG02 174 aa7.18□□□□□ -1.26
VCL-207ENST00000624354 PRDX2P32119 198 aa7.18□□□□□ -1.26
VCL-207ENST00000624354 RAB31Q13636 194 aa7.18□□□□□ -1.26
VCL-207ENST00000624354 KRTCAP3Q53RY4 240 aa7.18□□□□□ -1.26
VCL-207ENST00000624354 NIT1Q86X76 327 aa7.18□□□□□ -1.26
VCL-207ENST00000624354 ZNF430Q9H8G1 570 aaPredicted RBP7.18□□□□□ -1.26
VCL-207ENST00000624354 MRPL27Q9P0M9 148 aaKnown RBP7.18□□□□□ -1.26
VCL-207ENST00000624354 FZR1Q9UM11 496 aa7.18□□□□□ -1.26
VCL-207ENST00000624354 TCF19Q9Y242 345 aa7.18□□□□□ -1.26
VCL-207ENST00000624354 YTHDF2Q9Y5A9 579 aaKnown RBP7.18□□□□□ -1.26
VCL-207ENST00000624354 SELENOKQ9Y6D0 94 aa7.18□□□□□ -1.26
VCL-207ENST00000624354 EPG5Q9HCE0 2579 aa7.18□□□□□ -1.26
VCL-207ENST00000624354 A0A1W2PS18 150 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 RELBQ01201 579 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 SRSF6Q13247 344 aaKnown RBP7.17□□□□□ -1.26
VCL-207ENST00000624354 PMCHL1Q16048 86 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 ZNF718Q3SXZ3 478 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 LRRC10Q5BKY1 277 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 RNFT1Q5M7Z0 435 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 TEPPQ6URK8 271 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 Q6ZT83 130 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 CD177Q8N6Q3 437 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 LRRC29Q8WV35 223 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 TMEM140Q9NV12 185 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 PTPRQQ9UMZ3 2332 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 SLC17A3O00476 420 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms