RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 BANF1O75531 89 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 NDUFC2O95298 119 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 CSN2P05814 226 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 LGALS1P09382 135 aaKnown RBP1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 TFPTP0C1Z6 253 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 CGB3P0DN86 165 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 CGB7P0DN87 165 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 CRABP2P29373 138 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 ATP5G3P48201 142 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 EMP1P54849 157 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 MMDQ15546 238 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 CST6Q15828 149 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 LTC4SQ16873 150 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 TNFAIP8L3Q5GJ75 292 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 BRMS1LQ5PSV4 323 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 IBA57Q5T440 356 aaKnown RBP1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 SLC22A24Q8N4F4 322 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 ZNF283Q8N7M2 679 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 FER1L6-AS1Q8NA97 138 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 OR4K13Q8NH42 304 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 GPR119Q8TDV5 335 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 GPR146Q96CH1 333 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 MS4A6EQ96DS6 147 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 LYSMD1Q96S90 227 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 TSC22D3Q99576 134 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 B9D2Q9BPU9 175 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 COMMD5Q9GZQ3 224 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 CCDC90BQ9GZT6 254 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 GABARAPL1Q9H0R8 117 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 FBXL12Q9NXK8 326 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 MED11Q9P086 117 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 OR52A1Q9UKL2 312 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 PHLDA3Q9Y5J5 127 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 XIRP1Q702N8 1843 aaKnown RBP1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 KIF13BQ9NQT8 1826 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 SMARCA2P51531 1590 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 NESP48681 1621 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 RTL1A6NKG5 1358 aa1.58□□□□□ -2.16
SCAMP1-205ENST00000614488 SETD5Q9C0A6 1442 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 YTHDC2Q9H6S0 1430 aaKnown RBP1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 MAST2Q6P0Q8 1798 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 KIF13AQ9H1H9 1805 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 CCDC88AQ3V6T2 1871 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 TRBV20OR9-2A0A075B6H5 130 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 A0A0B4J2C4 111 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 SIGLEC16A6NMB1 481 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 PLA2G10O15496 165 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 NDUFA2O43678 99 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 GYPCP04921 128 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 ZNF705DP0CH99 300 aaPredicted RBP1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 PPIBP23284 216 aaKnown RBP1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 AKR1C3P42330 323 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 ZNF140P52738 457 aaPredicted RBP1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 CKS1BP61024 79 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 HBA1P69905 142 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 CAV1Q03135 178 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 Q6ZS49 121 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 SCXQ7RTU7 201 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 GPHB5Q86YW7 130 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 LRRC18Q8N456 261 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 C12orf45Q8N5I9 185 aaPredicted RBP1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 DAND5Q8N907 189 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 OR13C8Q8NGS7 320 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 CD200R1Q8TD46 325 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 MBD3L1Q8WWY6 194 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 ACOT12Q8WYK0 555 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 RNASE6Q93091 150 aaKnown RBP1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 CMBLQ96DG6 245 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 CCDC115Q96NT0 180 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 PFDN5Q99471 154 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 SERPINI1Q99574 410 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 WDR61Q9GZS3 305 aaKnown RBP1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 PARVBQ9HBI1 364 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 TAAR3PQ9P1P4 343 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 TP73-AS1Q9UF72 201 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 RPUSD1Q9UJJ7 312 aaKnown RBP1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 JPT1Q9UK76 154 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 ASB4Q9Y574 426 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 RFX7Q2KHR2 1363 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 KIF24Q5T7B8 1368 aa1.57□□□□□ -2.16
SCAMP1-205ENST00000614488 DENND4BO75064 1496 aaPredicted RBP1.56□□□□□ -2.16
SCAMP1-205ENST00000614488 MYH7BA7E2Y1 1941 aa1.56□□□□□ -2.16
SCAMP1-205ENST00000614488 DICER1Q9UPY3 1922 aaKnown RBP1.56□□□□□ -2.16
SCAMP1-205ENST00000614488 KDM6BO15054 1643 aa1.56□□□□□ -2.16
SCAMP1-205ENST00000614488 TRAV9-1A0A075B6T8 112 aa1.56□□□□□ -2.16
SCAMP1-205ENST00000614488 IGKV1D-43A0A0B4J1Z2 117 aa1.56□□□□□ -2.16
SCAMP1-205ENST00000614488 TRAV4A0A0B4J268 109 aa1.56□□□□□ -2.16
SCAMP1-205ENST00000614488 EFCAB10A6NFE3 127 aa1.56□□□□□ -2.16
SCAMP1-205ENST00000614488 RIIAD1A6NNX1 92 aa1.56□□□□□ -2.16
SCAMP1-205ENST00000614488 A8MWP4 228 aa1.56□□□□□ -2.16
SCAMP1-205ENST00000614488 E7EQ34 232 aa1.56□□□□□ -2.16
SCAMP1-205ENST00000614488 G3V3Q6 166 aa1.56□□□□□ -2.16
SCAMP1-205ENST00000614488 I3L521 148 aa1.56□□□□□ -2.16
SCAMP1-205ENST00000614488 SLC17A3O00476 420 aa1.56□□□□□ -2.16
SCAMP1-205ENST00000614488 PFDN1O60925 122 aa1.56□□□□□ -2.16
SCAMP1-205ENST00000614488 PDYNP01213 254 aa1.56□□□□□ -2.16
SCAMP1-205ENST00000614488 IGKV1D-33P01593 117 aa1.56□□□□□ -2.16
SCAMP1-205ENST00000614488 IGKV1-33P01594 117 aa1.56□□□□□ -2.16
SCAMP1-205ENST00000614488 RBP1P09455 135 aa1.56□□□□□ -2.16
SCAMP1-205ENST00000614488 CD7P09564 240 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms