RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 SLC25A24Q6NUK1 477 aa14.11□□□□□ -0.15
SHKBP1-224ENST00000600718 IL34Q6ZMJ4 242 aa14.11□□□□□ -0.15
SHKBP1-224ENST00000600718 LINC00469Q8N7U9 141 aa14.11□□□□□ -0.15
SHKBP1-224ENST00000600718 SCGB1C1Q8TD33 95 aa14.11□□□□□ -0.15
SHKBP1-224ENST00000600718 GNPNAT1Q96EK6 184 aaPredicted RBP14.11□□□□□ -0.15
SHKBP1-224ENST00000600718 TMEM147Q9BVK8 224 aa14.11□□□□□ -0.15
SHKBP1-224ENST00000600718 DOPEY2Q9Y3R5 2298 aa14.11□□□□□ -0.15
SHKBP1-224ENST00000600718 CGB1A6NKQ9 187 aa14.11□□□□□ -0.15
SHKBP1-224ENST00000600718 E7EUB6 86 aa14.11□□□□□ -0.15
SHKBP1-224ENST00000600718 CA2P00918 260 aa14.11□□□□□ -0.15
SHKBP1-224ENST00000600718 IGHV4-31P0DP07 118 aa14.11□□□□□ -0.15
SHKBP1-224ENST00000600718 TMEM11P17152 192 aa14.11□□□□□ -0.15
SHKBP1-224ENST00000600718 RPL27AP46776 148 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-224ENST00000600718 COMPP49747 757 aaPredicted RBP14.11□□□□□ -0.15
SHKBP1-224ENST00000600718 RUSC1-AS1Q66K80 236 aa14.11□□□□□ -0.15
SHKBP1-224ENST00000600718 MRPL41Q8IXM3 137 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-224ENST00000600718 MAPK1IP1LQ8NDC0 245 aa14.11□□□□□ -0.15
SHKBP1-224ENST00000600718 OR10W1Q8NGF6 305 aa14.11□□□□□ -0.15
SHKBP1-224ENST00000600718 TMEM170AQ8WVE7 144 aa14.11□□□□□ -0.15
SHKBP1-224ENST00000600718 GGACTQ9BVM4 153 aa14.11□□□□□ -0.15
SHKBP1-224ENST00000600718 TACC2O95359 2948 aa14.1□□□□□ -0.15
SHKBP1-224ENST00000600718 TET2Q6N021 2002 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-224ENST00000600718 IGHV3OR16-10A0A075B7F0 116 aa14.1□□□□□ -0.15
SHKBP1-224ENST00000600718 FAM157CP0CG43 387 aa14.1□□□□□ -0.15
SHKBP1-224ENST00000600718 ATP6V0CP27449 155 aa14.1□□□□□ -0.15
SHKBP1-224ENST00000600718 SNCAP37840 140 aa14.1□□□□□ -0.15
SHKBP1-224ENST00000600718 LRRC75BQ2VPJ9 315 aa14.1□□□□□ -0.15
SHKBP1-224ENST00000600718 TMEM249Q2WGJ8 235 aa14.1□□□□□ -0.15
SHKBP1-224ENST00000600718 BSXQ3C1V8 233 aa14.1□□□□□ -0.15
SHKBP1-224ENST00000600718 C2orf83Q53S99 150 aa14.1□□□□□ -0.15
SHKBP1-224ENST00000600718 C10orf55Q5SWW7 151 aa14.1□□□□□ -0.15
SHKBP1-224ENST00000600718 UQCC1Q9NVA1 299 aa14.1□□□□□ -0.15
SHKBP1-224ENST00000600718 IGHV4-38-2P0DP08 117 aa14.09□□□□□ -0.15
SHKBP1-224ENST00000600718 SULT1A2P50226 295 aa14.09□□□□□ -0.15
SHKBP1-224ENST00000600718 VWC2Q2TAL6 325 aa14.09□□□□□ -0.15
SHKBP1-224ENST00000600718 MEGF9Q9H1U4 602 aa14.09□□□□□ -0.15
SHKBP1-224ENST00000600718 C1RLQ9NZP8 487 aa14.09□□□□□ -0.15
SHKBP1-224ENST00000600718 MED13LQ71F56 2210 aa14.09□□□□□ -0.15
SHKBP1-224ENST00000600718 FCN1O00602 326 aa14.09□□□□□ -0.15
SHKBP1-224ENST00000600718 AKR1C1Q04828 323 aa14.09□□□□□ -0.15
SHKBP1-224ENST00000600718 C5orf64Q2M2E5 130 aa14.09□□□□□ -0.15
SHKBP1-224ENST00000600718 FAM120AOSQ5T036 256 aa14.09□□□□□ -0.15
SHKBP1-224ENST00000600718 SFT2D1Q8WV19 159 aa14.09□□□□□ -0.15
SHKBP1-224ENST00000600718 SH3BGRL3Q9H299 93 aa14.09□□□□□ -0.15
SHKBP1-224ENST00000600718 CELSR2Q9HCU4 2923 aa14.08□□□□□ -0.15
SHKBP1-224ENST00000600718 ABCA2Q9BZC7 2435 aa14.08□□□□□ -0.16
SHKBP1-224ENST00000600718 A0A1B0GW64 132 aa14.08□□□□□ -0.16
SHKBP1-224ENST00000600718 PRSS46E5RG02 174 aa14.08□□□□□ -0.16
SHKBP1-224ENST00000600718 AVPP01185 164 aa14.08□□□□□ -0.16
SHKBP1-224ENST00000600718 RNASE2P10153 161 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-224ENST00000600718 FOLR2P14207 255 aa14.08□□□□□ -0.16
SHKBP1-224ENST00000600718 GNB1P62873 340 aa14.08□□□□□ -0.16
SHKBP1-224ENST00000600718 DLK1P80370 383 aa14.08□□□□□ -0.16
SHKBP1-224ENST00000600718 BRD3OSQ6XYD6 125 aa14.08□□□□□ -0.16
SHKBP1-224ENST00000600718 WDR61Q9GZS3 305 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-224ENST00000600718 CRYBA1P05813 215 aa14.07□□□□□ -0.16
SHKBP1-224ENST00000600718 NPBWR1P48145 328 aa14.07□□□□□ -0.16
SHKBP1-224ENST00000600718 SUB1P53999 127 aaKnown RBP eCLIP14.07□□□□□ -0.16
SHKBP1-224ENST00000600718 BPIFB3P59826 476 aa14.07□□□□□ -0.16
SHKBP1-224ENST00000600718 WT1-ASQ06250 92 aa14.07□□□□□ -0.16
SHKBP1-224ENST00000600718 FBLN7Q53RD9 439 aa14.07□□□□□ -0.16
SHKBP1-224ENST00000600718 KLF17Q5JT82 389 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-224ENST00000600718 OR2G3Q8NGZ4 309 aa14.07□□□□□ -0.16
SHKBP1-224ENST00000600718 SAT2Q96F10 170 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-224ENST00000600718 SRSF8Q9BRL6 282 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-224ENST00000600718 PLA2G2EQ9NZK7 142 aa14.07□□□□□ -0.16
SHKBP1-224ENST00000600718 FAM96BQ9Y3D0 163 aa14.07□□□□□ -0.16
SHKBP1-224ENST00000600718 A0A0U1RQK1 487 aa14.07□□□□□ -0.16
SHKBP1-224ENST00000600718 UBE2L5PA0A1B0GUS4 154 aa14.07□□□□□ -0.16
SHKBP1-224ENST00000600718 NCBP2LA6PVI3 153 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-224ENST00000600718 OR13C7P0DN81 318 aa14.07□□□□□ -0.16
SHKBP1-224ENST00000600718 RAB5CP51148 216 aa14.07□□□□□ -0.16
SHKBP1-224ENST00000600718 RXFP4Q8TDU9 374 aa14.07□□□□□ -0.16
SHKBP1-224ENST00000600718 TAF15Q92804 592 aaKnown RBP eCLIP14.07□□□□□ -0.16
SHKBP1-224ENST00000600718 TREM1Q9NP99 234 aa14.07□□□□□ -0.16
SHKBP1-224ENST00000600718 CNIH1O95406 144 aa14.06□□□□□ -0.16
SHKBP1-224ENST00000600718 SRSF3P84103 164 aaKnown RBP14.06□□□□□ -0.16
SHKBP1-224ENST00000600718 CYB5R2Q6BCY4 276 aa14.06□□□□□ -0.16
SHKBP1-224ENST00000600718 SRSF12Q8WXF0 261 aaKnown RBP14.06□□□□□ -0.16
SHKBP1-224ENST00000600718 FOXC2Q99958 501 aa14.06□□□□□ -0.16
SHKBP1-224ENST00000600718 WNK2Q9Y3S1 2297 aa14.06□□□□□ -0.16
SHKBP1-224ENST00000600718 IGLC7A0M8Q6 106 aa14.05□□□□□ -0.16
SHKBP1-224ENST00000600718 ZNF705EA8MWA4 302 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-224ENST00000600718 UMAD1C9J7I0 102 aa14.05□□□□□ -0.16
SHKBP1-224ENST00000600718 FOSL1P15407 271 aa14.05□□□□□ -0.16
SHKBP1-224ENST00000600718 MDKP21741 143 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-224ENST00000600718 SSBP2P81877 361 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-224ENST00000600718 RUNX1Q01196 453 aa14.05□□□□□ -0.16
SHKBP1-224ENST00000600718 PSMG3Q9BT73 122 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-224ENST00000600718 PTPN13Q12923 2485 aa14.05□□□□□ -0.16
SHKBP1-224ENST00000600718 TEX22C9J3V5 150 aa14.05□□□□□ -0.16
SHKBP1-224ENST00000600718 FNDC10F2Z333 226 aa14.05□□□□□ -0.16
SHKBP1-224ENST00000600718 ANKRD17O75179 2603 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-224ENST00000600718 SMIM6P0DI80 62 aa14.05□□□□□ -0.16
SHKBP1-224ENST00000600718 ZNF562Q6V9R5 426 aa14.05□□□□□ -0.16
SHKBP1-224ENST00000600718 TIMM9Q9Y5J7 89 aa14.05□□□□□ -0.16
SHKBP1-224ENST00000600718 S100A8P05109 93 aa14.04□□□□□ -0.16
SHKBP1-224ENST00000600718 FBP1P09467 338 aa14.04□□□□□ -0.16
SHKBP1-224ENST00000600718 RAB5BP61020 215 aa14.04□□□□□ -0.16
SHKBP1-224ENST00000600718 FXYD3Q14802 87 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms