RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 SNCAP37840 140 aa16.52■□□□□ 0.24
PNKP-203ENST00000593946 NDUFA5Q16718 116 aa16.52■□□□□ 0.24
PNKP-203ENST00000593946 ATP6V1FQ16864 119 aa16.52■□□□□ 0.24
PNKP-203ENST00000593946 MRPL41Q8IXM3 137 aaKnown RBP16.52■□□□□ 0.24
PNKP-203ENST00000593946 TMED6Q8WW62 240 aa16.52■□□□□ 0.24
PNKP-203ENST00000593946 IFNA4P05014 189 aa16.51■□□□□ 0.23
PNKP-203ENST00000593946 OR13C7P0DN81 318 aa16.51■□□□□ 0.23
PNKP-203ENST00000593946 VWC2Q2TAL6 325 aa16.51■□□□□ 0.23
PNKP-203ENST00000593946 ZNF562Q6V9R5 426 aa16.51■□□□□ 0.23
PNKP-203ENST00000593946 C9orf139Q6ZV77 190 aa16.51■□□□□ 0.23
PNKP-203ENST00000593946 RBM14Q96PK6 669 aaKnown RBP16.51■□□□□ 0.23
PNKP-203ENST00000593946 SRSF8Q9BRL6 282 aaKnown RBP16.51■□□□□ 0.23
PNKP-203ENST00000593946 CNIH1O95406 144 aa16.5■□□□□ 0.23
PNKP-203ENST00000593946 HLA-DRB1P01911 266 aa16.5■□□□□ 0.23
PNKP-203ENST00000593946 FXYD3Q14802 87 aa16.5■□□□□ 0.23
PNKP-203ENST00000593946 TUSC1Q2TAM9 212 aa16.5■□□□□ 0.23
PNKP-203ENST00000593946 HSD17B13Q7Z5P4 300 aaPredicted RBP16.5■□□□□ 0.23
PNKP-203ENST00000593946 BCL6BQ8N143 479 aaPredicted RBP16.5■□□□□ 0.23
PNKP-203ENST00000593946 HSD17B11Q8NBQ5 300 aa16.5■□□□□ 0.23
PNKP-203ENST00000593946 TMEM147Q9BVK8 224 aa16.5■□□□□ 0.23
PNKP-203ENST00000593946 PARD6GQ9BYG4 376 aaPredicted RBP16.5■□□□□ 0.23
PNKP-203ENST00000593946 IFNA5P01569 189 aa16.5■□□□□ 0.23
PNKP-203ENST00000593946 SPP1P10451 314 aa16.5■□□□□ 0.23
PNKP-203ENST00000593946 AREGP15514 252 aa16.5■□□□□ 0.23
PNKP-203ENST00000593946 CX3CL1P78423 397 aa16.5■□□□□ 0.23
PNKP-203ENST00000593946 KRTAP1-1Q07627 177 aa16.5■□□□□ 0.23
PNKP-203ENST00000593946 FAM74A1Q5RGS3 127 aa16.5■□□□□ 0.23
PNKP-203ENST00000593946 EIF5AL1Q6IS14 154 aaKnown RBP16.5■□□□□ 0.23
PNKP-203ENST00000593946 ZNF114Q8NC26 417 aa16.5■□□□□ 0.23
PNKP-203ENST00000593946 SLC25A33Q9BSK2 321 aa16.5■□□□□ 0.23
PNKP-203ENST00000593946 GGACTQ9BVM4 153 aa16.5■□□□□ 0.23
PNKP-203ENST00000593946 H3BUX3 64 aa16.49■□□□□ 0.23
PNKP-203ENST00000593946 FBXO24O75426 580 aa16.49■□□□□ 0.23
PNKP-203ENST00000593946 DEFB112Q30KQ8 113 aa16.49■□□□□ 0.23
PNKP-203ENST00000593946 TMEM219Q86XT9 240 aa16.49■□□□□ 0.23
PNKP-203ENST00000593946 SSMEM1Q8WWF3 244 aa16.49■□□□□ 0.23
PNKP-203ENST00000593946 P2RX4Q99571 388 aa16.49■□□□□ 0.23
PNKP-203ENST00000593946 UQCC1Q9NVA1 299 aa16.49■□□□□ 0.23
PNKP-203ENST00000593946 UBE2L5PA0A1B0GUS4 154 aa16.48■□□□□ 0.23
PNKP-203ENST00000593946 MDFIC2A0A1B0GVS7 189 aa16.48■□□□□ 0.23
PNKP-203ENST00000593946 RPS10-NUDT3A0A1W2PQS6 291 aa16.48■□□□□ 0.23
PNKP-203ENST00000593946 REG1AP05451 166 aa16.48■□□□□ 0.23
PNKP-203ENST00000593946 SEC11BP0C7V7 166 aa16.48■□□□□ 0.23
PNKP-203ENST00000593946 ATP6V0CP27449 155 aa16.48■□□□□ 0.23
PNKP-203ENST00000593946 DLK1P80370 383 aa16.48■□□□□ 0.23
PNKP-203ENST00000593946 NDPQ00604 133 aa16.48■□□□□ 0.23
PNKP-203ENST00000593946 C5orf56Q8N8D9 126 aa16.48■□□□□ 0.23
PNKP-203ENST00000593946 RASL11BQ9BPW5 248 aa16.48■□□□□ 0.23
PNKP-203ENST00000593946 SH3BGRL3Q9H299 93 aa16.48■□□□□ 0.23
PNKP-203ENST00000593946 MOB4Q9Y3A3 225 aa16.48■□□□□ 0.23
PNKP-203ENST00000593946 IGHV7-81A0A0B4J1V7 117 aa16.48■□□□□ 0.23
PNKP-203ENST00000593946 A6NDX4 124 aa16.48■□□□□ 0.23
PNKP-203ENST00000593946 FGF16O43320 207 aa16.48■□□□□ 0.23
PNKP-203ENST00000593946 APELAP0DMC3 54 aa16.48■□□□□ 0.23
PNKP-203ENST00000593946 SUB1P53999 127 aaKnown RBP eCLIP16.48■□□□□ 0.23
PNKP-203ENST00000593946 C22orf15Q8WYQ4 148 aa16.48■□□□□ 0.23
PNKP-203ENST00000593946 ARPC1AQ92747 370 aa16.48■□□□□ 0.23
PNKP-203ENST00000593946 WDR61Q9GZS3 305 aaKnown RBP16.48■□□□□ 0.23
PNKP-203ENST00000593946 OTOGQ6ZRI0 2925 aa16.47■□□□□ 0.23
PNKP-203ENST00000593946 MDKP21741 143 aaPredicted RBP16.47■□□□□ 0.23
PNKP-203ENST00000593946 S100A1P23297 94 aa16.47■□□□□ 0.23
PNKP-203ENST00000593946 RUNX1Q01196 453 aa16.47■□□□□ 0.23
PNKP-203ENST00000593946 PVRIGQ6DKI7 326 aa16.47■□□□□ 0.23
PNKP-203ENST00000593946 SLC25A24Q6NUK1 477 aa16.47■□□□□ 0.23
PNKP-203ENST00000593946 GNPNAT1Q96EK6 184 aaPredicted RBP16.47■□□□□ 0.23
PNKP-203ENST00000593946 SLC25A32Q9H2D1 315 aa16.47■□□□□ 0.23
PNKP-203ENST00000593946 SONP18583 2426 aaKnown RBP16.46■□□□□ 0.23
PNKP-203ENST00000593946 CD5LO43866 347 aa16.46■□□□□ 0.23
PNKP-203ENST00000593946 CLLU1Q5K131 121 aa16.46■□□□□ 0.23
PNKP-203ENST00000593946 SCGB1C1Q8TD33 95 aa16.46■□□□□ 0.23
PNKP-203ENST00000593946 FAM103A1Q9BTL3 118 aaKnown RBP16.46■□□□□ 0.23
PNKP-203ENST00000593946 NMBP08949 121 aa16.45■□□□□ 0.22
PNKP-203ENST00000593946 ARSJQ5FYB0 599 aaPredicted RBP16.45■□□□□ 0.22
PNKP-203ENST00000593946 TEX29Q8N6K0 151 aa16.45■□□□□ 0.22
PNKP-203ENST00000593946 OR1P1Q8NH06 330 aa16.45■□□□□ 0.22
PNKP-203ENST00000593946 RNASEH2CQ8TDP1 164 aaKnown RBP16.45■□□□□ 0.22
PNKP-203ENST00000593946 ABHD5Q8WTS1 349 aa16.45■□□□□ 0.22
PNKP-203ENST00000593946 PCNPQ8WW12 178 aaKnown RBP16.45■□□□□ 0.22
PNKP-203ENST00000593946 TAF15Q92804 592 aaKnown RBP eCLIP16.45■□□□□ 0.22
PNKP-203ENST00000593946 HSPB9Q9BQS6 159 aa16.45■□□□□ 0.22
PNKP-203ENST00000593946 PLA2G2EQ9NZK7 142 aa16.45■□□□□ 0.22
PNKP-203ENST00000593946 PITPNC1Q9UKF7 332 aa16.45■□□□□ 0.22
PNKP-203ENST00000593946 FNDC10F2Z333 226 aa16.45■□□□□ 0.22
PNKP-203ENST00000593946 AMY1AP04745 511 aa16.45■□□□□ 0.22
PNKP-203ENST00000593946 FAM157CP0CG43 387 aa16.45■□□□□ 0.22
PNKP-203ENST00000593946 RAB14P61106 215 aa16.45■□□□□ 0.22
PNKP-203ENST00000593946 LY6EQ16553 131 aa16.45■□□□□ 0.22
PNKP-203ENST00000593946 FBXO7Q9Y3I1 522 aa16.45■□□□□ 0.22
PNKP-203ENST00000593946 F11RQ9Y624 299 aaKnown RBP16.45■□□□□ 0.22
PNKP-203ENST00000593946 RFNGQ9Y644 331 aa16.45■□□□□ 0.22
PNKP-203ENST00000593946 CTRB1P17538 263 aa16.44■□□□□ 0.22
PNKP-203ENST00000593946 SULT1A2P50226 295 aa16.44■□□□□ 0.22
PNKP-203ENST00000593946 MFAP2P55001 183 aa16.44■□□□□ 0.22
PNKP-203ENST00000593946 CTRB2Q6GPI1 263 aa16.44■□□□□ 0.22
PNKP-203ENST00000593946 RNF141Q8WVD5 230 aa16.44■□□□□ 0.22
PNKP-203ENST00000593946 RSG1Q9BU20 258 aa16.44■□□□□ 0.22
PNKP-203ENST00000593946 WDR83OSQ9Y284 106 aa16.44■□□□□ 0.22
PNKP-203ENST00000593946 EGR2P11161 476 aaPredicted RBP16.43■□□□□ 0.22
PNKP-203ENST00000593946 FGF7P21781 194 aa16.43■□□□□ 0.22
PNKP-203ENST00000593946 IER3P46695 156 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms