RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 FAM106AQ4KMX7 169 aa7.73□□□□□ -1.17
BRCA1-227ENST00000591849 TMED4Q7Z7H5 227 aa7.73□□□□□ -1.17
BRCA1-227ENST00000591849 SLC35G3Q8N808 338 aa7.73□□□□□ -1.17
BRCA1-227ENST00000591849 OR9G4Q8NGQ1 327 aa7.73□□□□□ -1.17
BRCA1-227ENST00000591849 PRR25Q96S07 402 aa7.73□□□□□ -1.17
BRCA1-227ENST00000591849 TMEM222Q9H0R3 208 aa7.73□□□□□ -1.17
BRCA1-227ENST00000591849 C5orf66Q9H5L9 145 aa7.73□□□□□ -1.17
BRCA1-227ENST00000591849 ZNF256Q9Y2P7 627 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-227ENST00000591849 IGLV11-55A0A075B6I3 123 aa7.72□□□□□ -1.17
BRCA1-227ENST00000591849 IGHV3-21A0A0B4J1V1 117 aa7.72□□□□□ -1.17
BRCA1-227ENST00000591849 LINC00854A0A1B0GVQ3 168 aa7.72□□□□□ -1.17
BRCA1-227ENST00000591849 CENPXA8MT69 81 aa7.72□□□□□ -1.17
BRCA1-227ENST00000591849 PPP5D1E7EU14 171 aa7.72□□□□□ -1.17
BRCA1-227ENST00000591849 K7EIL1 84 aa7.72□□□□□ -1.17
BRCA1-227ENST00000591849 BMPR1BO00238 502 aa7.72□□□□□ -1.17
BRCA1-227ENST00000591849 IGKV1-5P01602 117 aa7.72□□□□□ -1.17
BRCA1-227ENST00000591849 CLEC3BP05452 202 aa7.72□□□□□ -1.17
BRCA1-227ENST00000591849 ETV6P41212 452 aa7.72□□□□□ -1.17
BRCA1-227ENST00000591849 HOXA1P49639 335 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-227ENST00000591849 KLF9Q13886 244 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-227ENST00000591849 SPINK9Q5DT21 86 aa7.72□□□□□ -1.17
BRCA1-227ENST00000591849 TMEM268Q5VZI3 342 aa7.72□□□□□ -1.17
BRCA1-227ENST00000591849 PLET1Q6UQ28 207 aa7.72□□□□□ -1.17
BRCA1-227ENST00000591849 FAM219AQ8IW50 185 aa7.72□□□□□ -1.17
BRCA1-227ENST00000591849 VN1R17PQ8TDU5 208 aa7.72□□□□□ -1.17
BRCA1-227ENST00000591849 DYNLRB2Q8TF09 96 aa7.72□□□□□ -1.17
BRCA1-227ENST00000591849 RBPMSQ93062 196 aaKnown RBP7.72□□□□□ -1.17
BRCA1-227ENST00000591849 MISP3Q96FF7 219 aa7.72□□□□□ -1.17
BRCA1-227ENST00000591849 ZC4H2Q9NQZ6 224 aa7.72□□□□□ -1.17
BRCA1-227ENST00000591849 BATF3Q9NR55 127 aa7.72□□□□□ -1.17
BRCA1-227ENST00000591849 F11RQ9Y624 299 aaKnown RBP7.72□□□□□ -1.17
BRCA1-227ENST00000591849 A0A0B4J293 547 aa7.71□□□□□ -1.18
BRCA1-227ENST00000591849 PIGBOS1A0A0B4J2F0 54 aa7.71□□□□□ -1.18
BRCA1-227ENST00000591849 MFSD2BA6NFX1 497 aa7.71□□□□□ -1.18
BRCA1-227ENST00000591849 DBX1A6NMT0 343 aa7.71□□□□□ -1.18
BRCA1-227ENST00000591849 CDS2O95674 445 aa7.71□□□□□ -1.18
BRCA1-227ENST00000591849 HLA-AP01891 365 aaKnown RBP7.71□□□□□ -1.18
BRCA1-227ENST00000591849 SPNP16150 400 aa7.71□□□□□ -1.18
BRCA1-227ENST00000591849 GPR183P32249 361 aa7.71□□□□□ -1.18
BRCA1-227ENST00000591849 SUB1P53999 127 aaKnown RBP eCLIP7.71□□□□□ -1.18
BRCA1-227ENST00000591849 PRCDQ00LT1 54 aa7.71□□□□□ -1.18
BRCA1-227ENST00000591849 ZNF79Q15937 498 aa7.71□□□□□ -1.18
BRCA1-227ENST00000591849 Q56UQ5 140 aa7.71□□□□□ -1.18
BRCA1-227ENST00000591849 SELENOHQ8IZQ5 122 aaKnown RBP7.71□□□□□ -1.18
BRCA1-227ENST00000591849 UBAC2Q8NBM4 344 aa7.71□□□□□ -1.18
BRCA1-227ENST00000591849 GLYATL2Q8WU03 294 aa7.71□□□□□ -1.18
BRCA1-227ENST00000591849 DEDD2Q8WXF8 326 aa7.71□□□□□ -1.18
BRCA1-227ENST00000591849 TRIM63Q969Q1 353 aa7.71□□□□□ -1.18
BRCA1-227ENST00000591849 SLC25A21Q9BQT8 299 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-227ENST00000591849 SRRQ9GZT4 340 aa7.71□□□□□ -1.18
BRCA1-227ENST00000591849 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-227ENST00000591849 NAP1L6A6NFF2 107 aa7.7□□□□□ -1.18
BRCA1-227ENST00000591849 CEBPZOSA8MTT3 80 aa7.7□□□□□ -1.18
BRCA1-227ENST00000591849 ST8SIA3O43173 380 aa7.7□□□□□ -1.18
BRCA1-227ENST00000591849 GP9P14770 177 aa7.7□□□□□ -1.18
BRCA1-227ENST00000591849 VAMP1P23763 118 aa7.7□□□□□ -1.18
BRCA1-227ENST00000591849 SRPXP78539 464 aa7.7□□□□□ -1.18
BRCA1-227ENST00000591849 CD69Q07108 199 aa7.7□□□□□ -1.18
BRCA1-227ENST00000591849 TMEM187Q14656 261 aa7.7□□□□□ -1.18
BRCA1-227ENST00000591849 HAPLN4Q86UW8 402 aa7.7□□□□□ -1.18
BRCA1-227ENST00000591849 GPHB5Q86YW7 130 aa7.7□□□□□ -1.18
BRCA1-227ENST00000591849 LGI3Q8N145 548 aa7.7□□□□□ -1.18
BRCA1-227ENST00000591849 OR2C3Q8N628 320 aa7.7□□□□□ -1.18
BRCA1-227ENST00000591849 OR1P1Q8NH06 330 aa7.7□□□□□ -1.18
BRCA1-227ENST00000591849 IL22RA2Q969J5 263 aa7.7□□□□□ -1.18
BRCA1-227ENST00000591849 PINX1Q96BK5 328 aaKnown RBP7.7□□□□□ -1.18
BRCA1-227ENST00000591849 GPR146Q96CH1 333 aa7.7□□□□□ -1.18
BRCA1-227ENST00000591849 CCDC140Q96MF4 163 aa7.7□□□□□ -1.18
BRCA1-227ENST00000591849 PALMDQ9NP74 551 aa7.7□□□□□ -1.18
BRCA1-227ENST00000591849 GAR1Q9NY12 217 aaKnown RBP7.7□□□□□ -1.18
BRCA1-227ENST00000591849 C21orf62Q9NYP8 219 aa7.7□□□□□ -1.18
BRCA1-227ENST00000591849 CACNG5Q9UF02 275 aa7.7□□□□□ -1.18
BRCA1-227ENST00000591849 OR2T8A6NH00 312 aa7.69□□□□□ -1.18
BRCA1-227ENST00000591849 CSN3P07498 182 aa7.69□□□□□ -1.18
BRCA1-227ENST00000591849 SULT1A3P0DMM9 295 aa7.69□□□□□ -1.18
BRCA1-227ENST00000591849 SULT1A4P0DMN0 295 aa7.69□□□□□ -1.18
BRCA1-227ENST00000591849 MFAP4P55083 255 aa7.69□□□□□ -1.18
BRCA1-227ENST00000591849 SPCS3P61009 180 aa7.69□□□□□ -1.18
BRCA1-227ENST00000591849 KLK9Q2XQG4 91 aa7.69□□□□□ -1.18
BRCA1-227ENST00000591849 LCN12Q6JVE5 192 aa7.69□□□□□ -1.18
BRCA1-227ENST00000591849 ZNF502Q8TBZ5 544 aa7.69□□□□□ -1.18
BRCA1-227ENST00000591849 SCARB1Q8WTV0 552 aa7.69□□□□□ -1.18
BRCA1-227ENST00000591849 GALNT14Q96FL9 552 aa7.69□□□□□ -1.18
BRCA1-227ENST00000591849 HEYLQ9NQ87 328 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-227ENST00000591849 PRR13Q9NZ81 148 aa7.69□□□□□ -1.18
BRCA1-227ENST00000591849 CACFD1Q9UGQ2 172 aa7.69□□□□□ -1.18
BRCA1-227ENST00000591849 KLK9Q9UKQ9 250 aa7.69□□□□□ -1.18
BRCA1-227ENST00000591849 SMAD5-AS1Q9Y6J3 95 aa7.69□□□□□ -1.18
BRCA1-227ENST00000591849 TMEM56-RWDD3S4R434 201 aa7.69□□□□□ -1.18
BRCA1-227ENST00000591849 IGHV3-35A0A0C4DH35 117 aa7.68□□□□□ -1.18
BRCA1-227ENST00000591849 A0A0G2JRQ6 117 aa7.68□□□□□ -1.18
BRCA1-227ENST00000591849 LGALS9O00182 355 aa7.68□□□□□ -1.18
BRCA1-227ENST00000591849 NUPL2O15504 423 aaKnown RBP7.68□□□□□ -1.18
BRCA1-227ENST00000591849 TGOLN2O43493 480 aa7.68□□□□□ -1.18
BRCA1-227ENST00000591849 MT-CO2P00403 227 aa7.68□□□□□ -1.18
BRCA1-227ENST00000591849 IGLV1-51P01701 117 aa7.68□□□□□ -1.18
BRCA1-227ENST00000591849 P0C879 139 aa7.68□□□□□ -1.18
BRCA1-227ENST00000591849 MFAP2P55001 183 aa7.68□□□□□ -1.18
BRCA1-227ENST00000591849 BAK1Q16611 211 aa7.68□□□□□ -1.18
BRCA1-227ENST00000591849 TMEM128Q5BJH2 165 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms