RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 PSMG3Q9BT73 122 aaPredicted RBP9.09□□□□□ -0.95
SMAD4-205ENST00000588745 MEGF9Q9H1U4 602 aa9.09□□□□□ -0.95
SMAD4-205ENST00000588745 PLA2G2EQ9NZK7 142 aa9.09□□□□□ -0.95
SMAD4-205ENST00000588745 C1RLQ9NZP8 487 aa9.09□□□□□ -0.95
SMAD4-205ENST00000588745 CSMD1Q96PZ7 3565 aa9.08□□□□□ -0.96
SMAD4-205ENST00000588745 NCBP2LA6PVI3 153 aaKnown RBP9.08□□□□□ -0.96
SMAD4-205ENST00000588745 FBP1P09467 338 aa9.08□□□□□ -0.96
SMAD4-205ENST00000588745 OR13C7P0DN81 318 aa9.08□□□□□ -0.96
SMAD4-205ENST00000588745 TMEM182Q6ZP80 229 aaPredicted RBP9.08□□□□□ -0.96
SMAD4-205ENST00000588745 HSD17B13Q7Z5P4 300 aaPredicted RBP9.08□□□□□ -0.96
SMAD4-205ENST00000588745 OR2G3Q8NGZ4 309 aa9.08□□□□□ -0.96
SMAD4-205ENST00000588745 TAF15Q92804 592 aaKnown RBP eCLIP9.08□□□□□ -0.96
SMAD4-205ENST00000588745 SRSF8Q9BRL6 282 aaKnown RBP9.08□□□□□ -0.96
SMAD4-205ENST00000588745 FAM96BQ9Y3D0 163 aa9.08□□□□□ -0.96
SMAD4-205ENST00000588745 TIMM9Q9Y5J7 89 aa9.08□□□□□ -0.96
SMAD4-205ENST00000588745 NAV3Q8IVL0 2385 aa9.07□□□□□ -0.96
SMAD4-205ENST00000588745 SMCO3A2RU48 225 aa9.07□□□□□ -0.96
SMAD4-205ENST00000588745 ZNF705EA8MWA4 302 aaPredicted RBP9.07□□□□□ -0.96
SMAD4-205ENST00000588745 FNDC10F2Z333 226 aa9.07□□□□□ -0.96
SMAD4-205ENST00000588745 CNIH1O95406 144 aa9.07□□□□□ -0.96
SMAD4-205ENST00000588745 AREGP15514 252 aa9.07□□□□□ -0.96
SMAD4-205ENST00000588745 MDKP21741 143 aaPredicted RBP9.07□□□□□ -0.96
SMAD4-205ENST00000588745 FGF7P21781 194 aa9.07□□□□□ -0.96
SMAD4-205ENST00000588745 RAB5CP51148 216 aa9.07□□□□□ -0.96
SMAD4-205ENST00000588745 SUB1P53999 127 aaKnown RBP eCLIP9.07□□□□□ -0.96
SMAD4-205ENST00000588745 BPIFB3P59826 476 aa9.07□□□□□ -0.96
SMAD4-205ENST00000588745 CYB5R2Q6BCY4 276 aa9.07□□□□□ -0.96
SMAD4-205ENST00000588745 Q8N9W7 124 aa9.07□□□□□ -0.96
SMAD4-205ENST00000588745 SAT2Q96F10 170 aaPredicted RBP9.07□□□□□ -0.96
SMAD4-205ENST00000588745 P2RX4Q99571 388 aa9.07□□□□□ -0.96
SMAD4-205ENST00000588745 RSG1Q9BU20 258 aa9.07□□□□□ -0.96
SMAD4-205ENST00000588745 MED9Q9NWA0 146 aa9.07□□□□□ -0.96
SMAD4-205ENST00000588745 WDR83OSQ9Y284 106 aa9.07□□□□□ -0.96
SMAD4-205ENST00000588745 RFNGQ9Y644 331 aa9.07□□□□□ -0.96
SMAD4-205ENST00000588745 SVEP1Q4LDE5 3571 aa9.06□□□□□ -0.96
SMAD4-205ENST00000588745 UMAD1C9J7I0 102 aa9.06□□□□□ -0.96
SMAD4-205ENST00000588745 FSHBP01225 129 aa9.06□□□□□ -0.96
SMAD4-205ENST00000588745 HLA-DRB1P01911 266 aa9.06□□□□□ -0.96
SMAD4-205ENST00000588745 REG1AP05451 166 aa9.06□□□□□ -0.96
SMAD4-205ENST00000588745 FXYD3Q14802 87 aa9.06□□□□□ -0.96
SMAD4-205ENST00000588745 ARSJQ5FYB0 599 aaPredicted RBP9.06□□□□□ -0.96
SMAD4-205ENST00000588745 PVRIGQ6DKI7 326 aa9.06□□□□□ -0.96
SMAD4-205ENST00000588745 BTNL8Q6UX41 500 aa9.06□□□□□ -0.96
SMAD4-205ENST00000588745 TREML4Q6UXN2 200 aa9.06□□□□□ -0.96
SMAD4-205ENST00000588745 ZNF562Q6V9R5 426 aa9.06□□□□□ -0.96
SMAD4-205ENST00000588745 Q6ZRG5 221 aa9.06□□□□□ -0.96
SMAD4-205ENST00000588745 COMMD7Q86VX2 200 aa9.06□□□□□ -0.96
SMAD4-205ENST00000588745 RNASEH2CQ8TDP1 164 aaKnown RBP9.06□□□□□ -0.96
SMAD4-205ENST00000588745 ABHD5Q8WTS1 349 aa9.06□□□□□ -0.96
SMAD4-205ENST00000588745 SSMEM1Q8WWF3 244 aa9.06□□□□□ -0.96
SMAD4-205ENST00000588745 ARPC1AQ92747 370 aa9.06□□□□□ -0.96
SMAD4-205ENST00000588745 NPCDR1Q9BY65 106 aa9.06□□□□□ -0.96
SMAD4-205ENST00000588745 PARP11Q9NR21 331 aa9.06□□□□□ -0.96
SMAD4-205ENST00000588745 PFDN2Q9UHV9 154 aa9.06□□□□□ -0.96
SMAD4-205ENST00000588745 MOB4Q9Y3A3 225 aa9.06□□□□□ -0.96
SMAD4-205ENST00000588745 SOX21Q9Y651 276 aaPredicted RBP9.06□□□□□ -0.96
SMAD4-205ENST00000588745 PDZD2O15018 2839 aa9.05□□□□□ -0.96
SMAD4-205ENST00000588745 PLXNB1O43157 2135 aa9.05□□□□□ -0.96
SMAD4-205ENST00000588745 TRIM77I1YAP6 450 aa9.05□□□□□ -0.96
SMAD4-205ENST00000588745 MPDU1O75352 247 aa9.05□□□□□ -0.96
SMAD4-205ENST00000588745 PRH1P02810 166 aa9.05□□□□□ -0.96
SMAD4-205ENST00000588745 APELAP0DMC3 54 aa9.05□□□□□ -0.96
SMAD4-205ENST00000588745 CAMLGP49069 296 aa9.05□□□□□ -0.96
SMAD4-205ENST00000588745 CX3CL1P78423 397 aa9.05□□□□□ -0.96
SMAD4-205ENST00000588745 BLOC1S1P78537 153 aa9.05□□□□□ -0.96
SMAD4-205ENST00000588745 NDPQ00604 133 aa9.05□□□□□ -0.96
SMAD4-205ENST00000588745 AKR1C1Q04828 323 aa9.05□□□□□ -0.96
SMAD4-205ENST00000588745 CD69Q07108 199 aa9.05□□□□□ -0.96
SMAD4-205ENST00000588745 AANATQ16613 207 aa9.05□□□□□ -0.96
SMAD4-205ENST00000588745 AKR1C8PQ5T2L2 129 aa9.05□□□□□ -0.96
SMAD4-205ENST00000588745 PXDC1Q5TGL8 231 aa9.05□□□□□ -0.96
SMAD4-205ENST00000588745 SLC16A13Q7RTY0 426 aa9.05□□□□□ -0.96
SMAD4-205ENST00000588745 CENPVQ7Z7K6 275 aaPredicted RBP9.05□□□□□ -0.96
SMAD4-205ENST00000588745 PIFOQ8TCI5 191 aa9.05□□□□□ -0.96
SMAD4-205ENST00000588745 RBM14Q96PK6 669 aaKnown RBP9.05□□□□□ -0.96
SMAD4-205ENST00000588745 SSX3Q99909 188 aa9.05□□□□□ -0.96
SMAD4-205ENST00000588745 RASL11BQ9BPW5 248 aa9.05□□□□□ -0.96
SMAD4-205ENST00000588745 SLC25A33Q9BSK2 321 aa9.05□□□□□ -0.96
SMAD4-205ENST00000588745 NPVFQ9HCQ7 196 aa9.05□□□□□ -0.96
SMAD4-205ENST00000588745 FBXO7Q9Y3I1 522 aa9.05□□□□□ -0.96
SMAD4-205ENST00000588745 F11RQ9Y624 299 aaKnown RBP9.05□□□□□ -0.96
SMAD4-205ENST00000588745 ITPR3Q14573 2671 aa9.04□□□□□ -0.96
SMAD4-205ENST00000588745 FASNP49327 2511 aaKnown RBP9.04□□□□□ -0.96
SMAD4-205ENST00000588745 IGHV7-81A0A0B4J1V7 117 aa9.04□□□□□ -0.96
SMAD4-205ENST00000588745 C17orf112F2Z3M2 114 aa9.04□□□□□ -0.96
SMAD4-205ENST00000588745 GPX4P36969 197 aaPredicted RBP9.04□□□□□ -0.96
SMAD4-205ENST00000588745 MFAP2P55001 183 aa9.04□□□□□ -0.96
SMAD4-205ENST00000588745 SERF2P84101 59 aa9.04□□□□□ -0.96
SMAD4-205ENST00000588745 CIARTQ8N365 385 aaPredicted RBP9.04□□□□□ -0.96
SMAD4-205ENST00000588745 C5orf56Q8N8D9 126 aa9.04□□□□□ -0.96
SMAD4-205ENST00000588745 OR1P1Q8NH06 330 aa9.04□□□□□ -0.96
SMAD4-205ENST00000588745 NANPQ8TBE9 248 aa9.04□□□□□ -0.96
SMAD4-205ENST00000588745 SLC35E1Q96K37 410 aa9.04□□□□□ -0.96
SMAD4-205ENST00000588745 FAM103A1Q9BTL3 118 aaKnown RBP9.04□□□□□ -0.96
SMAD4-205ENST00000588745 LSM4Q9Y4Z0 139 aaKnown RBP9.04□□□□□ -0.96
SMAD4-205ENST00000588745 MAP1AP78559 2803 aaPredicted RBP9.04□□□□□ -0.96
SMAD4-205ENST00000588745 HECTD1Q9ULT8 2610 aa9.03□□□□□ -0.96
SMAD4-205ENST00000588745 A6NDX4 124 aa9.03□□□□□ -0.96
SMAD4-205ENST00000588745 H3BUX3 64 aa9.03□□□□□ -0.96
SMAD4-205ENST00000588745 CORTO00230 105 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms