RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 PRCDQ00LT1 54 aa7.75□□□□□ -1.17
TPM4-207ENST00000588032 DEFA5Q01523 94 aa7.75□□□□□ -1.17
TPM4-207ENST00000588032 SLC25A24Q6NUK1 477 aa7.75□□□□□ -1.17
TPM4-207ENST00000588032 OR9G4Q8NGQ1 327 aa7.75□□□□□ -1.17
TPM4-207ENST00000588032 RNASE11Q8TAA1 199 aaKnown RBP7.75□□□□□ -1.17
TPM4-207ENST00000588032 RBPMSQ93062 196 aaKnown RBP7.75□□□□□ -1.17
TPM4-207ENST00000588032 IL22RA2Q969J5 263 aa7.75□□□□□ -1.17
TPM4-207ENST00000588032 ATP6V0BQ99437 205 aa7.75□□□□□ -1.17
TPM4-207ENST00000588032 PDCD10Q9BUL8 212 aa7.75□□□□□ -1.17
TPM4-207ENST00000588032 PEMTQ9UBM1 199 aa7.75□□□□□ -1.17
TPM4-207ENST00000588032 F11RQ9Y624 299 aaKnown RBP7.75□□□□□ -1.17
TPM4-207ENST00000588032 TMEM56-RWDD3S4R434 201 aa7.75□□□□□ -1.17
TPM4-207ENST00000588032 A0A0B4J293 547 aa7.74□□□□□ -1.17
TPM4-207ENST00000588032 NAP1L6A6NFF2 107 aa7.74□□□□□ -1.17
TPM4-207ENST00000588032 DBX1A6NMT0 343 aa7.74□□□□□ -1.17
TPM4-207ENST00000588032 INS-IGF2F8WCM5 200 aa7.74□□□□□ -1.17
TPM4-207ENST00000588032 BMPR1BO00238 502 aa7.74□□□□□ -1.17
TPM4-207ENST00000588032 TRBV12-3P01733 135 aa7.74□□□□□ -1.17
TPM4-207ENST00000588032 AKR1C4P17516 323 aa7.74□□□□□ -1.17
TPM4-207ENST00000588032 SYNJ2BPP57105 145 aa7.74□□□□□ -1.17
TPM4-207ENST00000588032 SRPXP78539 464 aa7.74□□□□□ -1.17
TPM4-207ENST00000588032 TMEM128Q5BJH2 165 aa7.74□□□□□ -1.17
TPM4-207ENST00000588032 TRIQKQ629K1 86 aa7.74□□□□□ -1.17
TPM4-207ENST00000588032 ZNF57Q68EA5 555 aaPredicted RBP7.74□□□□□ -1.17
TPM4-207ENST00000588032 GPHB5Q86YW7 130 aa7.74□□□□□ -1.17
TPM4-207ENST00000588032 SELENOHQ8IZQ5 122 aaKnown RBP7.74□□□□□ -1.17
TPM4-207ENST00000588032 OR2C3Q8N628 320 aa7.74□□□□□ -1.17
TPM4-207ENST00000588032 ZNF114Q8NC26 417 aa7.74□□□□□ -1.17
TPM4-207ENST00000588032 OR1P1Q8NH06 330 aa7.74□□□□□ -1.17
TPM4-207ENST00000588032 PLEKHA3Q9HB20 300 aa7.74□□□□□ -1.17
TPM4-207ENST00000588032 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.74□□□□□ -1.17
TPM4-207ENST00000588032 SIGLEC8Q9NYZ4 499 aa7.74□□□□□ -1.17
TPM4-207ENST00000588032 ZNF256Q9Y2P7 627 aaPredicted RBP7.74□□□□□ -1.17
TPM4-207ENST00000588032 VWFP04275 2813 aa7.74□□□□□ -1.17
TPM4-207ENST00000588032 CENPXA8MT69 81 aa7.73□□□□□ -1.17
TPM4-207ENST00000588032 LGALS9O00182 355 aa7.73□□□□□ -1.17
TPM4-207ENST00000588032 IFNA17P01571 189 aa7.73□□□□□ -1.17
TPM4-207ENST00000588032 CLEC3BP05452 202 aa7.73□□□□□ -1.17
TPM4-207ENST00000588032 ARL3P36405 182 aa7.73□□□□□ -1.17
TPM4-207ENST00000588032 SUB1P53999 127 aaKnown RBP eCLIP7.73□□□□□ -1.175e-9■■■■■ 42.5
TPM4-207ENST00000588032 TMEM187Q14656 261 aa7.73□□□□□ -1.17
TPM4-207ENST00000588032 BAK1Q16611 211 aa7.73□□□□□ -1.17
TPM4-207ENST00000588032 FAM106AQ4KMX7 169 aa7.73□□□□□ -1.17
TPM4-207ENST00000588032 AARDQ4LEZ3 155 aa7.73□□□□□ -1.17
TPM4-207ENST00000588032 TMEM268Q5VZI3 342 aa7.73□□□□□ -1.17
TPM4-207ENST00000588032 CLEC19AQ6UXS0 136 aa7.73□□□□□ -1.17
TPM4-207ENST00000588032 C19orf35Q6ZS72 473 aa7.73□□□□□ -1.17
TPM4-207ENST00000588032 OR52E5Q8NH55 327 aa7.73□□□□□ -1.17
TPM4-207ENST00000588032 ZNF502Q8TBZ5 544 aa7.73□□□□□ -1.17
TPM4-207ENST00000588032 TMEM230Q96A57 120 aa7.73□□□□□ -1.17
TPM4-207ENST00000588032 CCDC140Q96MF4 163 aa7.73□□□□□ -1.17
TPM4-207ENST00000588032 C7orf50Q9BRJ6 194 aaKnown RBP7.73□□□□□ -1.17
TPM4-207ENST00000588032 GAR1Q9NY12 217 aaKnown RBP7.73□□□□□ -1.17
TPM4-207ENST00000588032 DMRT1Q9Y5R6 373 aa7.73□□□□□ -1.17
TPM4-207ENST00000588032 NOTCH3Q9UM47 2321 aa7.73□□□□□ -1.17
TPM4-207ENST00000588032 A0A0B4J2A0 478 aa7.72□□□□□ -1.17
TPM4-207ENST00000588032 WI2-2373I1.2A0A1W2PRP0 233 aa7.72□□□□□ -1.17
TPM4-207ENST00000588032 A6NHS1 94 aa7.72□□□□□ -1.17
TPM4-207ENST00000588032 K7EIL1 84 aa7.72□□□□□ -1.17
TPM4-207ENST00000588032 ST8SIA3O43173 380 aa7.72□□□□□ -1.17
TPM4-207ENST00000588032 OR2C1O95371 312 aa7.72□□□□□ -1.17
TPM4-207ENST00000588032 SNCAP37840 140 aa7.72□□□□□ -1.17
TPM4-207ENST00000588032 SPCS3P61009 180 aa7.72□□□□□ -1.17
TPM4-207ENST00000588032 RBMS2Q15434 407 aaKnown RBP7.72□□□□□ -1.17
TPM4-207ENST00000588032 IZUMO4Q1ZYL8 232 aa7.72□□□□□ -1.17
TPM4-207ENST00000588032 CNPY1Q3B7I2 92 aa7.72□□□□□ -1.17
TPM4-207ENST00000588032 DEFB121Q5J5C9 76 aa7.72□□□□□ -1.17
TPM4-207ENST00000588032 SPSB3Q6PJ21 355 aa7.72□□□□□ -1.17
TPM4-207ENST00000588032 IL34Q6ZMJ4 242 aa7.72□□□□□ -1.17
TPM4-207ENST00000588032 LGI3Q8N145 548 aa7.72□□□□□ -1.17
TPM4-207ENST00000588032 SLC35G3Q8N808 338 aa7.72□□□□□ -1.17
TPM4-207ENST00000588032 ENY2Q9NPA8 101 aa7.72□□□□□ -1.17
TPM4-207ENST00000588032 SHPKQ9UHJ6 478 aa7.72□□□□□ -1.17
TPM4-207ENST00000588032 DUXBA0A1W2PPF3 345 aa7.71□□□□□ -1.18
TPM4-207ENST00000588032 MFSD2BA6NFX1 497 aa7.71□□□□□ -1.18
TPM4-207ENST00000588032 PPP5D1E7EU14 171 aa7.71□□□□□ -1.18
TPM4-207ENST00000588032 CORTO00230 105 aa7.71□□□□□ -1.18
TPM4-207ENST00000588032 IGLV1-51P01701 117 aa7.71□□□□□ -1.18
TPM4-207ENST00000588032 IGHV3-23P01764 117 aa7.71□□□□□ -1.18
TPM4-207ENST00000588032 CSN3P07498 182 aa7.71□□□□□ -1.18
TPM4-207ENST00000588032 MFAP2P55001 183 aa7.71□□□□□ -1.18
TPM4-207ENST00000588032 UBE2MP61081 183 aaKnown RBP7.71□□□□□ -1.18
TPM4-207ENST00000588032 SUPT4H1P63272 117 aaKnown RBP7.71□□□□□ -1.18
TPM4-207ENST00000588032 PLET1Q6UQ28 207 aa7.71□□□□□ -1.18
TPM4-207ENST00000588032 Q6ZRM9 215 aa7.71□□□□□ -1.18
TPM4-207ENST00000588032 TMED4Q7Z7H5 227 aa7.71□□□□□ -1.18
TPM4-207ENST00000588032 CENPSQ8N2Z9 138 aa7.71□□□□□ -1.18
TPM4-207ENST00000588032 OR2K2Q8NGT1 345 aa7.71□□□□□ -1.18
TPM4-207ENST00000588032 LHFPL5Q8TAF8 219 aa7.71□□□□□ -1.18
TPM4-207ENST00000588032 SCARB1Q8WTV0 552 aa7.71□□□□□ -1.18
TPM4-207ENST00000588032 GPR146Q96CH1 333 aa7.71□□□□□ -1.18
TPM4-207ENST00000588032 BSCL2Q96G97 398 aaPredicted RBP7.71□□□□□ -1.18
TPM4-207ENST00000588032 SDHCQ99643 169 aaPredicted RBP7.71□□□□□ -1.18
TPM4-207ENST00000588032 TXN2Q99757 166 aa7.71□□□□□ -1.18
TPM4-207ENST00000588032 C21orf62Q9NYP8 219 aa7.71□□□□□ -1.18
TPM4-207ENST00000588032 S4R3C0 116 aa7.71□□□□□ -1.18
TPM4-207ENST00000588032 A0A0G2JRQ6 117 aa7.7□□□□□ -1.18
TPM4-207ENST00000588032 K7EIM0 57 aa7.7□□□□□ -1.18
TPM4-207ENST00000588032 NDUFB6O95139 128 aa7.7□□□□□ -1.18
TPM4-207ENST00000588032 LY86O95711 162 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms