RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 ACSM6Q6P461 480 aa7.47□□□□□ -1.21
GTF3C1-212ENST00000570129 UNQ9165/PRO28630Q6UXU0 137 aa7.47□□□□□ -1.21
GTF3C1-212ENST00000570129 ZNF502Q8TBZ5 544 aa7.47□□□□□ -1.21
GTF3C1-212ENST00000570129 MRAPQ8TCY5 172 aa7.47□□□□□ -1.21
GTF3C1-212ENST00000570129 TMEM170AQ8WVE7 144 aa7.47□□□□□ -1.21
GTF3C1-212ENST00000570129 BORCS5Q969J3 196 aa7.47□□□□□ -1.21
GTF3C1-212ENST00000570129 USMG5Q96IX5 58 aa7.47□□□□□ -1.21
GTF3C1-212ENST00000570129 PRRT1Q99946 306 aa7.47□□□□□ -1.21
GTF3C1-212ENST00000570129 CHRDL1Q9BU40 450 aa7.47□□□□□ -1.21
GTF3C1-212ENST00000570129 RANGRFQ9HD47 186 aaPredicted RBP7.47□□□□□ -1.21
GTF3C1-212ENST00000570129 NDUFA13Q9P0J0 144 aa7.47□□□□□ -1.21
GTF3C1-212ENST00000570129 PRNDQ9UKY0 176 aa7.47□□□□□ -1.21
GTF3C1-212ENST00000570129 COL7A1Q02388 2944 aa7.47□□□□□ -1.21
GTF3C1-212ENST00000570129 A0A0G2JLM5 398 aa7.46□□□□□ -1.22
GTF3C1-212ENST00000570129 FAM223BA6NKX1 122 aa7.46□□□□□ -1.22
GTF3C1-212ENST00000570129 CREBL2O60519 120 aaPredicted RBP7.46□□□□□ -1.22
GTF3C1-212ENST00000570129 S100GP29377 79 aa7.46□□□□□ -1.22
GTF3C1-212ENST00000570129 ADMP35318 185 aa7.46□□□□□ -1.22
GTF3C1-212ENST00000570129 MECP2P51608 486 aaKnown RBP7.46□□□□□ -1.22
GTF3C1-212ENST00000570129 AKR1C2P52895 323 aa7.46□□□□□ -1.22
GTF3C1-212ENST00000570129 IFITM3Q01628 133 aa7.46□□□□□ -1.22
GTF3C1-212ENST00000570129 PPP1R1AQ13522 171 aa7.46□□□□□ -1.22
GTF3C1-212ENST00000570129 TM4SF20Q53R12 229 aa7.46□□□□□ -1.22
GTF3C1-212ENST00000570129 C9orf66Q5T8R8 295 aa7.46□□□□□ -1.22
GTF3C1-212ENST00000570129 FAM223AQ8IWN6 122 aa7.46□□□□□ -1.22
GTF3C1-212ENST00000570129 OR2C3Q8N628 320 aa7.46□□□□□ -1.22
GTF3C1-212ENST00000570129 SLC35G3Q8N808 338 aa7.46□□□□□ -1.22
GTF3C1-212ENST00000570129 CCDC71LQ8N9Z2 235 aa7.46□□□□□ -1.22
GTF3C1-212ENST00000570129 TMEM56Q96MV1 263 aa7.46□□□□□ -1.22
GTF3C1-212ENST00000570129 AIFM2Q9BRQ8 373 aa7.46□□□□□ -1.22
GTF3C1-212ENST00000570129 FAM212BQ9NTI7 297 aaPredicted RBP7.46□□□□□ -1.22
GTF3C1-212ENST00000570129 RABL2AQ9UBK7 228 aaPredicted RBP7.46□□□□□ -1.22
GTF3C1-212ENST00000570129 CACNG5Q9UF02 275 aa7.46□□□□□ -1.22
GTF3C1-212ENST00000570129 SCP2D1Q9UJQ7 156 aa7.46□□□□□ -1.22
GTF3C1-212ENST00000570129 RABL2BQ9UNT1 228 aa7.46□□□□□ -1.22
GTF3C1-212ENST00000570129 F11RQ9Y624 299 aaKnown RBP7.46□□□□□ -1.22
GTF3C1-212ENST00000570129 TMEM56-RWDD3S4R434 201 aa7.46□□□□□ -1.22
GTF3C1-212ENST00000570129 OR2T8A6NH00 312 aa7.45□□□□□ -1.22
GTF3C1-212ENST00000570129 I3L2K1 104 aa7.45□□□□□ -1.22
GTF3C1-212ENST00000570129 ZNF207O43670 478 aaKnown RBP7.45□□□□□ -1.22
GTF3C1-212ENST00000570129 ANXA7P20073 488 aaKnown RBP7.45□□□□□ -1.22
GTF3C1-212ENST00000570129 GPR183P32249 361 aa7.45□□□□□ -1.22
GTF3C1-212ENST00000570129 UBE2MP61081 183 aaKnown RBP7.45□□□□□ -1.22
GTF3C1-212ENST00000570129 PRCDQ00LT1 54 aa7.45□□□□□ -1.22
GTF3C1-212ENST00000570129 SURF2Q15527 256 aaPredicted RBP7.45□□□□□ -1.22
GTF3C1-212ENST00000570129 SLC25A42Q86VD7 318 aa7.45□□□□□ -1.22
GTF3C1-212ENST00000570129 CADM3Q8N126 398 aa7.45□□□□□ -1.22
GTF3C1-212ENST00000570129 OR52B4Q8NGK2 314 aa7.45□□□□□ -1.22
GTF3C1-212ENST00000570129 SCARB1Q8WTV0 552 aa7.45□□□□□ -1.22
GTF3C1-212ENST00000570129 LSM10Q969L4 123 aaKnown RBP7.45□□□□□ -1.22
GTF3C1-212ENST00000570129 MISP3Q96FF7 219 aa7.45□□□□□ -1.22
GTF3C1-212ENST00000570129 DNAH9Q9NYC9 4486 aa7.45□□□□□ -1.22
GTF3C1-212ENST00000570129 MPTX1A8MV57 137 aa7.44□□□□□ -1.22
GTF3C1-212ENST00000570129 IFNA17P01571 189 aa7.44□□□□□ -1.22
GTF3C1-212ENST00000570129 RNASE2P10153 161 aaKnown RBP7.44□□□□□ -1.22
GTF3C1-212ENST00000570129 ARL3P36405 182 aa7.44□□□□□ -1.22
GTF3C1-212ENST00000570129 DHODHQ02127 395 aa7.44□□□□□ -1.22
GTF3C1-212ENST00000570129 RPEL1Q2QD12 228 aa7.44□□□□□ -1.22
GTF3C1-212ENST00000570129 NMSQ5H8A3 153 aa7.44□□□□□ -1.22
GTF3C1-212ENST00000570129 SGPP2Q8IWX5 399 aa7.44□□□□□ -1.22
GTF3C1-212ENST00000570129 OR9G4Q8NGQ1 327 aa7.44□□□□□ -1.22
GTF3C1-212ENST00000570129 RBPMSQ93062 196 aaKnown RBP7.44□□□□□ -1.22
GTF3C1-212ENST00000570129 ASCL2Q99929 193 aa7.44□□□□□ -1.22
GTF3C1-212ENST00000570129 FNDC4Q9H6D8 234 aaPredicted RBP7.44□□□□□ -1.22
GTF3C1-212ENST00000570129 LSM4Q9Y4Z0 139 aaKnown RBP7.44□□□□□ -1.22
GTF3C1-212ENST00000570129 IGHV3-49A0A0A0MS15 119 aa7.43□□□□□ -1.22
GTF3C1-212ENST00000570129 ZNF320A2RRD8 509 aa7.43□□□□□ -1.22
GTF3C1-212ENST00000570129 ADAP1O75689 374 aa7.43□□□□□ -1.22
GTF3C1-212ENST00000570129 NDUFB6O95139 128 aa7.43□□□□□ -1.22
GTF3C1-212ENST00000570129 LY86O95711 162 aa7.43□□□□□ -1.22
GTF3C1-212ENST00000570129 MT-CO2P00403 227 aa7.43□□□□□ -1.22
GTF3C1-212ENST00000570129 CTSGP08311 255 aa7.43□□□□□ -1.22
GTF3C1-212ENST00000570129 VAMP1P23763 118 aa7.43□□□□□ -1.22
GTF3C1-212ENST00000570129 TRIQKQ629K1 86 aa7.43□□□□□ -1.22
GTF3C1-212ENST00000570129 Q8N1Y9 231 aa7.43□□□□□ -1.22
GTF3C1-212ENST00000570129 UBAC2Q8NBM4 344 aa7.43□□□□□ -1.22
GTF3C1-212ENST00000570129 OR5B3Q8NH48 314 aa7.43□□□□□ -1.22
GTF3C1-212ENST00000570129 RNASE11Q8TAA1 199 aaKnown RBP7.43□□□□□ -1.22
GTF3C1-212ENST00000570129 EEF1AKMT3Q96AZ1 226 aa7.43□□□□□ -1.22
GTF3C1-212ENST00000570129 PINX1Q96BK5 328 aaKnown RBP7.43□□□□□ -1.22
GTF3C1-212ENST00000570129 RRNAD1Q96FB5 475 aaKnown RBP7.43□□□□□ -1.22
GTF3C1-212ENST00000570129 GALNT14Q96FL9 552 aa7.43□□□□□ -1.22
GTF3C1-212ENST00000570129 MCRIP2Q9BUT9 160 aaKnown RBP7.43□□□□□ -1.22
GTF3C1-212ENST00000570129 TBC1D24Q9ULP9 559 aa7.43□□□□□ -1.22
GTF3C1-212ENST00000570129 NBEAL2Q6ZNJ1 2754 aa7.42□□□□□ -1.22
GTF3C1-212ENST00000570129 TMEM213A2RRL7 107 aa7.42□□□□□ -1.22
GTF3C1-212ENST00000570129 C9orf170A2RU37 121 aa7.42□□□□□ -1.22
GTF3C1-212ENST00000570129 C2orf70A6NJV1 201 aa7.42□□□□□ -1.22
GTF3C1-212ENST00000570129 ZNF785A8K8V0 405 aa7.42□□□□□ -1.22
GTF3C1-212ENST00000570129 GGCTO75223 188 aaKnown RBP7.42□□□□□ -1.22
GTF3C1-212ENST00000570129 SFT2D2O95562 160 aa7.42□□□□□ -1.22
GTF3C1-212ENST00000570129 DUS4LO95620 317 aaKnown RBP7.42□□□□□ -1.22
GTF3C1-212ENST00000570129 IGLV1-51P01701 117 aa7.42□□□□□ -1.22
GTF3C1-212ENST00000570129 HOXB5P09067 269 aa7.42□□□□□ -1.22
GTF3C1-212ENST00000570129 FOLR2P14207 255 aa7.42□□□□□ -1.22
GTF3C1-212ENST00000570129 HIST1H1BP16401 226 aaKnown RBP7.42□□□□□ -1.22
GTF3C1-212ENST00000570129 ZP3P21754 424 aa7.42□□□□□ -1.22
GTF3C1-212ENST00000570129 AP3S2P59780 193 aa7.42□□□□□ -1.22
GTF3C1-212ENST00000570129 AARDQ4LEZ3 155 aa7.42□□□□□ -1.22
GTF3C1-212ENST00000570129 PVRIGQ6DKI7 326 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 243.9 ms