RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 OR9G9P0C7N8 305 aa11.27□□□□□ -0.61
COMMD4-225ENST00000569245 RAB9AP51151 201 aa11.27□□□□□ -0.61
COMMD4-225ENST00000569245 FXYD3Q14802 87 aa11.27□□□□□ -0.61
COMMD4-225ENST00000569245 IZUMO4Q1ZYL8 232 aa11.27□□□□□ -0.61
COMMD4-225ENST00000569245 UNQ5815/PRO19632Q6UWF5 114 aa11.27□□□□□ -0.61
COMMD4-225ENST00000569245 LFNGQ8NES3 379 aa11.27□□□□□ -0.61
COMMD4-225ENST00000569245 TMEM167AQ8TBQ9 72 aa11.27□□□□□ -0.61
COMMD4-225ENST00000569245 MRAPQ8TCY5 172 aa11.27□□□□□ -0.61
COMMD4-225ENST00000569245 ARPC1AQ92747 370 aa11.27□□□□□ -0.61
COMMD4-225ENST00000569245 WDR89Q96FK6 387 aaPredicted RBP11.27□□□□□ -0.61
COMMD4-225ENST00000569245 UBE2E2Q96LR5 201 aa11.27□□□□□ -0.61
COMMD4-225ENST00000569245 TPSG1Q9NRR2 321 aa11.27□□□□□ -0.61
COMMD4-225ENST00000569245 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.27□□□□□ -0.61
COMMD4-225ENST00000569245 GSKIPQ9P0R6 139 aa11.27□□□□□ -0.61
COMMD4-225ENST00000569245 CACFD1Q9UGQ2 172 aa11.27□□□□□ -0.61
COMMD4-225ENST00000569245 FAM90A26D6RGX4 464 aa11.26□□□□□ -0.61
COMMD4-225ENST00000569245 SNAPC5O75971 98 aa11.26□□□□□ -0.61
COMMD4-225ENST00000569245 EGR2P11161 476 aaPredicted RBP11.26□□□□□ -0.61
COMMD4-225ENST00000569245 HOXD3P31249 432 aaPredicted RBP11.26□□□□□ -0.61
COMMD4-225ENST00000569245 ID3Q02535 119 aa11.26□□□□□ -0.61
COMMD4-225ENST00000569245 ZNF429Q86V71 674 aa11.26□□□□□ -0.61
COMMD4-225ENST00000569245 ZNF491Q8N8L2 437 aa11.26□□□□□ -0.61
COMMD4-225ENST00000569245 OR11H1Q8NG94 326 aa11.26□□□□□ -0.61
COMMD4-225ENST00000569245 OR2T35Q8NGX2 323 aa11.26□□□□□ -0.61
COMMD4-225ENST00000569245 OR4A16Q8NH70 328 aa11.26□□□□□ -0.61
COMMD4-225ENST00000569245 OR1S1Q8NH92 325 aa11.26□□□□□ -0.61
COMMD4-225ENST00000569245 GNB4Q9HAV0 340 aa11.26□□□□□ -0.61
COMMD4-225ENST00000569245 ZNF355PQ9NSJ1 428 aa11.26□□□□□ -0.61
COMMD4-225ENST00000569245 AURKAIP1Q9NWT8 199 aaPredicted RBP11.26□□□□□ -0.61
COMMD4-225ENST00000569245 TRAV3A0A0B4J244 114 aa11.25□□□□□ -0.61
COMMD4-225ENST00000569245 C15orf61A6NNL5 157 aa11.25□□□□□ -0.61
COMMD4-225ENST00000569245 PSMB6P28072 239 aa11.25□□□□□ -0.61
COMMD4-225ENST00000569245 NKX2-1P43699 371 aaPredicted RBP11.25□□□□□ -0.61
COMMD4-225ENST00000569245 CD300CQ08708 224 aa11.25□□□□□ -0.61
COMMD4-225ENST00000569245 FGL1Q08830 312 aa11.25□□□□□ -0.61
COMMD4-225ENST00000569245 PJVKQ0ZLH3 352 aa11.25□□□□□ -0.61
COMMD4-225ENST00000569245 MRGPRG-AS1Q2M3A8 158 aa11.25□□□□□ -0.61
COMMD4-225ENST00000569245 AKIRIN2Q53H80 203 aa11.25□□□□□ -0.61
COMMD4-225ENST00000569245 OR1N2Q8NGR9 330 aa11.25□□□□□ -0.61
COMMD4-225ENST00000569245 OR52E5Q8NH55 327 aa11.25□□□□□ -0.61
COMMD4-225ENST00000569245 PPP1R1CQ8WVI7 109 aa11.25□□□□□ -0.61
COMMD4-225ENST00000569245 MS4A10Q96PG2 267 aa11.25□□□□□ -0.61
COMMD4-225ENST00000569245 TMEM14BQ9NUH8 114 aa11.25□□□□□ -0.61
COMMD4-225ENST00000569245 FKBP11Q9NYL4 201 aa11.25□□□□□ -0.61
COMMD4-225ENST00000569245 PRNDQ9UKY0 176 aa11.25□□□□□ -0.61
COMMD4-225ENST00000569245 G3V3Q6 166 aa11.24□□□□□ -0.61
COMMD4-225ENST00000569245 ST8SIA3O43173 380 aa11.24□□□□□ -0.61
COMMD4-225ENST00000569245 SOX15O60248 233 aa11.24□□□□□ -0.61
COMMD4-225ENST00000569245 MPC2O95563 127 aa11.24□□□□□ -0.61
COMMD4-225ENST00000569245 MBPP02686 304 aaPredicted RBP11.24□□□□□ -0.61
COMMD4-225ENST00000569245 CRIP2P52943 208 aaPredicted RBP11.24□□□□□ -0.61
COMMD4-225ENST00000569245 KIAA0141Q14154 515 aaPredicted RBP11.24□□□□□ -0.61
COMMD4-225ENST00000569245 PRSS8Q16651 343 aa11.24□□□□□ -0.61
COMMD4-225ENST00000569245 C19orf54Q5BKX5 351 aa11.24□□□□□ -0.61
COMMD4-225ENST00000569245 MMD2Q8IY49 270 aa11.24□□□□□ -0.61
COMMD4-225ENST00000569245 MYOZ3Q8TDC0 251 aa11.24□□□□□ -0.61
COMMD4-225ENST00000569245 QTRT1Q9BXR0 403 aaKnown RBP11.24□□□□□ -0.61
COMMD4-225ENST00000569245 HSPB7Q9UBY9 170 aa11.24□□□□□ -0.61
COMMD4-225ENST00000569245 ZNF257Q9Y2Q1 563 aa11.24□□□□□ -0.61
COMMD4-225ENST00000569245 NSG2Q9Y328 171 aa11.24□□□□□ -0.61
COMMD4-225ENST00000569245 TNCP24821 2201 aa11.24□□□□□ -0.61
COMMD4-225ENST00000569245 K7EPK0 472 aa11.23□□□□□ -0.61
COMMD4-225ENST00000569245 OR8U8P0C7N1 319 aa11.23□□□□□ -0.61
COMMD4-225ENST00000569245 MAS1LP35410 378 aa11.23□□□□□ -0.61
COMMD4-225ENST00000569245 TPPP2P59282 170 aa11.23□□□□□ -0.61
COMMD4-225ENST00000569245 OR2B8PP59922 312 aa11.23□□□□□ -0.61
COMMD4-225ENST00000569245 KRTAP10-11P60412 298 aa11.23□□□□□ -0.61
COMMD4-225ENST00000569245 RPL8P62917 257 aaKnown RBP11.23□□□□□ -0.61
COMMD4-225ENST00000569245 RAB32Q13637 225 aa11.23□□□□□ -0.61
COMMD4-225ENST00000569245 Q5BKY6 102 aa11.23□□□□□ -0.61
COMMD4-225ENST00000569245 OR5T1Q8NG75 326 aa11.23□□□□□ -0.61
COMMD4-225ENST00000569245 PPP1R14BQ96C90 147 aa11.23□□□□□ -0.61
COMMD4-225ENST00000569245 ZNF430Q9H8G1 570 aaPredicted RBP11.23□□□□□ -0.61
COMMD4-225ENST00000569245 OR51B2Q9Y5P1 312 aa11.23□□□□□ -0.61
COMMD4-225ENST00000569245 TRAV14DV4A0A0A6YYC5 116 aa11.22□□□□□ -0.61
COMMD4-225ENST00000569245 SEC14L6B5MCN3 397 aa11.22□□□□□ -0.61
COMMD4-225ENST00000569245 I3L521 148 aa11.22□□□□□ -0.61
COMMD4-225ENST00000569245 RBMXL2O75526 392 aaKnown RBP11.22□□□□□ -0.61
COMMD4-225ENST00000569245 MED6O75586 246 aa11.22□□□□□ -0.61
COMMD4-225ENST00000569245 SCGB1D2O95969 90 aa11.22□□□□□ -0.61
COMMD4-225ENST00000569245 C1QBP02746 253 aa11.22□□□□□ -0.61
COMMD4-225ENST00000569245 TRGV3P03979 118 aa11.22□□□□□ -0.61
COMMD4-225ENST00000569245 PET100P0DJ07 73 aa11.22□□□□□ -0.61
COMMD4-225ENST00000569245 SPCS3P61009 180 aa11.22□□□□□ -0.61
COMMD4-225ENST00000569245 HSPE1P61604 102 aaKnown RBP11.22□□□□□ -0.61
COMMD4-225ENST00000569245 TNFRSF9Q07011 255 aa11.22□□□□□ -0.61
COMMD4-225ENST00000569245 ZNF616Q08AN1 781 aa11.22□□□□□ -0.61
COMMD4-225ENST00000569245 OR5B3Q8NH48 314 aa11.22□□□□□ -0.61
COMMD4-225ENST00000569245 ZMAT5Q9UDW3 170 aaKnown RBP11.22□□□□□ -0.61
COMMD4-225ENST00000569245 DNAH3Q8TD57 4116 aa11.21□□□□□ -0.61
COMMD4-225ENST00000569245 TEX50A0A1B0GTY4 177 aa11.21□□□□□ -0.61
COMMD4-225ENST00000569245 H0YIZ8 118 aa11.21□□□□□ -0.61
COMMD4-225ENST00000569245 SMLR1H3BR10 107 aa11.21□□□□□ -0.61
COMMD4-225ENST00000569245 SYNGR2O43760 224 aa11.21□□□□□ -0.61
COMMD4-225ENST00000569245 DEDDO75618 318 aa11.21□□□□□ -0.61
COMMD4-225ENST00000569245 ACTL6BO94805 426 aa11.21□□□□□ -0.61
COMMD4-225ENST00000569245 IGHV3-11P01762 117 aa11.21□□□□□ -0.61
COMMD4-225ENST00000569245 RLN2P04090 185 aa11.21□□□□□ -0.61
COMMD4-225ENST00000569245 APELAP0DMC3 54 aa11.21□□□□□ -0.61
COMMD4-225ENST00000569245 SLC25A4P12235 298 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms