RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 C15orf61A6NNL5 157 aa12.89□□□□□ -0.35
GPHN-211ENST00000556020 GABARAPO95166 117 aa12.89□□□□□ -0.35
GPHN-211ENST00000556020 IGKV1-39P01597 117 aa12.89□□□□□ -0.35
GPHN-211ENST00000556020 IGKV1D-39P04432 117 aa12.89□□□□□ -0.35
GPHN-211ENST00000556020 PI3P19957 117 aa12.89□□□□□ -0.35
GPHN-211ENST00000556020 OR5B3Q8NH48 314 aa12.89□□□□□ -0.35
GPHN-211ENST00000556020 OR52I2Q8NH67 350 aa12.89□□□□□ -0.35
GPHN-211ENST00000556020 TMEM190Q8WZ59 177 aa12.89□□□□□ -0.35
GPHN-211ENST00000556020 MARC2Q969Z3 335 aa12.89□□□□□ -0.35
GPHN-211ENST00000556020 MRGPRFQ96AM1 343 aa12.89□□□□□ -0.35
GPHN-211ENST00000556020 BSCL2Q96G97 398 aaPredicted RBP12.89□□□□□ -0.35
GPHN-211ENST00000556020 ZNF436Q9C0F3 470 aaPredicted RBP12.89□□□□□ -0.35
GPHN-211ENST00000556020 TMEM14BQ9NUH8 114 aa12.89□□□□□ -0.35
GPHN-211ENST00000556020 MRPL27Q9P0M9 148 aaKnown RBP12.89□□□□□ -0.35
GPHN-211ENST00000556020 KLK11Q9UBX7 282 aa12.89□□□□□ -0.35
GPHN-211ENST00000556020 ZNF207O43670 478 aaKnown RBP12.88□□□□□ -0.35
GPHN-211ENST00000556020 ZNF182P17025 639 aaPredicted RBP12.88□□□□□ -0.35
GPHN-211ENST00000556020 PPP5CP53041 499 aa12.88□□□□□ -0.35
GPHN-211ENST00000556020 UCP3P55916 312 aa12.88□□□□□ -0.35
GPHN-211ENST00000556020 RNASE10Q5GAN6 216 aaKnown RBP12.88□□□□□ -0.35
GPHN-211ENST00000556020 MISP3Q96FF7 219 aa12.88□□□□□ -0.35
GPHN-211ENST00000556020 SEC22AQ96IW7 307 aa12.88□□□□□ -0.35
GPHN-211ENST00000556020 CHRDL1Q9BU40 450 aa12.88□□□□□ -0.35
GPHN-211ENST00000556020 TENM2Q9NT68 2774 aa12.88□□□□□ -0.35
GPHN-211ENST00000556020 K7EIM0 57 aa12.87□□□□□ -0.35
GPHN-211ENST00000556020 CD3DP04234 171 aa12.87□□□□□ -0.35
GPHN-211ENST00000556020 C8orf88P0DMB2 117 aa12.87□□□□□ -0.35
GPHN-211ENST00000556020 ELLP55199 621 aaPredicted RBP12.87□□□□□ -0.35
GPHN-211ENST00000556020 IZUMO4Q1ZYL8 232 aa12.87□□□□□ -0.35
GPHN-211ENST00000556020 ANKRD55Q3KP44 614 aa12.87□□□□□ -0.35
GPHN-211ENST00000556020 SPINK9Q5DT21 86 aa12.87□□□□□ -0.35
GPHN-211ENST00000556020 CADM3Q8N126 398 aa12.87□□□□□ -0.35
GPHN-211ENST00000556020 OR1L6Q8NGR2 347 aa12.87□□□□□ -0.35
GPHN-211ENST00000556020 FAM212BQ9NTI7 297 aaPredicted RBP12.87□□□□□ -0.35
GPHN-211ENST00000556020 ADMP35318 185 aa12.86□□□□□ -0.35
GPHN-211ENST00000556020 SPSB3Q6PJ21 355 aa12.86□□□□□ -0.35
GPHN-211ENST00000556020 DAZ1Q9NQZ3 744 aaKnown RBP12.86□□□□□ -0.35
GPHN-211ENST00000556020 UBQLN2Q9UHD9 624 aa12.86□□□□□ -0.35
GPHN-211ENST00000556020 TRAV25A0A0B4J276 109 aa12.85□□□□□ -0.35
GPHN-211ENST00000556020 F8W735 103 aaPredicted RBP12.85□□□□□ -0.35
GPHN-211ENST00000556020 NDUFA4O00483 81 aa12.85□□□□□ -0.35
GPHN-211ENST00000556020 RGS5O15539 181 aa12.85□□□□□ -0.35
GPHN-211ENST00000556020 IGHV3-48P01763 117 aa12.85□□□□□ -0.35
GPHN-211ENST00000556020 PIGPP57054 158 aa12.85□□□□□ -0.35
GPHN-211ENST00000556020 SCGB2B2Q4G0G5 96 aa12.85□□□□□ -0.35
GPHN-211ENST00000556020 GPR141Q7Z602 305 aa12.85□□□□□ -0.35
GPHN-211ENST00000556020 OR2C3Q8N628 320 aa12.85□□□□□ -0.35
GPHN-211ENST00000556020 OR4D10Q8NGI6 311 aa12.85□□□□□ -0.35
GPHN-211ENST00000556020 OR1P1Q8NH06 330 aa12.85□□□□□ -0.35
GPHN-211ENST00000556020 PINX1Q96BK5 328 aaKnown RBP12.85□□□□□ -0.35
GPHN-211ENST00000556020 ABHD1Q96SE0 405 aa12.85□□□□□ -0.35
GPHN-211ENST00000556020 CSMD3Q7Z407 3707 aa12.85□□□□□ -0.35
GPHN-211ENST00000556020 AKR1C2P52895 323 aa12.84□□□□□ -0.35
GPHN-211ENST00000556020 HSPE1P61604 102 aaKnown RBP12.84□□□□□ -0.35
GPHN-211ENST00000556020 PRCDQ00LT1 54 aa12.84□□□□□ -0.35
GPHN-211ENST00000556020 LHFPL1Q86WI0 220 aa12.84□□□□□ -0.35
GPHN-211ENST00000556020 ARRDC1Q8N5I2 433 aa12.84□□□□□ -0.35
GPHN-211ENST00000556020 TP53RKQ96S44 253 aa12.84□□□□□ -0.35
GPHN-211ENST00000556020 GGTLC1Q9BX51 225 aa12.84□□□□□ -0.35
GPHN-211ENST00000556020 MRPS26Q9BYN8 205 aaKnown RBP12.84□□□□□ -0.35
GPHN-211ENST00000556020 C5orf66Q9H5L9 145 aa12.84□□□□□ -0.35
GPHN-211ENST00000556020 MTFP1Q9UDX5 166 aa12.84□□□□□ -0.35
GPHN-211ENST00000556020 STARD9Q9P2P6 4700 aa12.84□□□□□ -0.35
GPHN-211ENST00000556020 LOC102724200A0A096LPH7 203 aaPredicted RBP12.83□□□□□ -0.36
GPHN-211ENST00000556020 IGHV3-49A0A0A0MS15 119 aa12.83□□□□□ -0.36
GPHN-211ENST00000556020 YIF1AO95070 293 aa12.83□□□□□ -0.36
GPHN-211ENST00000556020 MT-CO2P00403 227 aa12.83□□□□□ -0.36
GPHN-211ENST00000556020 CTSGP08311 255 aa12.83□□□□□ -0.36
GPHN-211ENST00000556020 MFAP4P55083 255 aa12.83□□□□□ -0.36
GPHN-211ENST00000556020 RND3P61587 244 aa12.83□□□□□ -0.36
GPHN-211ENST00000556020 SP6Q3SY56 376 aa12.83□□□□□ -0.36
GPHN-211ENST00000556020 LAMTOR1Q6IAA8 161 aa12.83□□□□□ -0.36
GPHN-211ENST00000556020 ZNF486Q96H40 463 aaPredicted RBP12.83□□□□□ -0.36
GPHN-211ENST00000556020 SPAG8Q99932 426 aaPredicted RBP12.83□□□□□ -0.36
GPHN-211ENST00000556020 MIXL1Q9H2W2 232 aa12.83□□□□□ -0.36
GPHN-211ENST00000556020 COPZ2Q9P299 210 aa12.83□□□□□ -0.36
GPHN-211ENST00000556020 RYR2Q92736 4967 aa12.83□□□□□ -0.36
GPHN-211ENST00000556020 LCE6AA0A183 80 aa12.82□□□□□ -0.36
GPHN-211ENST00000556020 C3orf85A0A1B0GTC6 90 aa12.82□□□□□ -0.36
GPHN-211ENST00000556020 I3L2K1 104 aa12.82□□□□□ -0.36
GPHN-211ENST00000556020 NUPL2O15504 423 aaKnown RBP12.82□□□□□ -0.36
GPHN-211ENST00000556020 RAB3DO95716 219 aa12.82□□□□□ -0.36
GPHN-211ENST00000556020 IGKV1-5P01602 117 aa12.82□□□□□ -0.36
GPHN-211ENST00000556020 TBPP20226 339 aa12.82□□□□□ -0.36
GPHN-211ENST00000556020 TAS2R19P59542 299 aa12.82□□□□□ -0.36
GPHN-211ENST00000556020 ERHP84090 104 aaKnown RBP12.82□□□□□ -0.36
GPHN-211ENST00000556020 SPCS2Q15005 226 aa12.82□□□□□ -0.36
GPHN-211ENST00000556020 TRIM16LQ309B1 348 aa12.82□□□□□ -0.36
GPHN-211ENST00000556020 SLC35G3Q8N808 338 aa12.82□□□□□ -0.36
GPHN-211ENST00000556020 OR13C8Q8NGS7 320 aa12.82□□□□□ -0.36
GPHN-211ENST00000556020 C15orf40Q8WUR7 153 aa12.82□□□□□ -0.36
GPHN-211ENST00000556020 ATP6V0BQ99437 205 aa12.82□□□□□ -0.36
GPHN-211ENST00000556020 CTDSP2O14595 271 aa12.81□□□□□ -0.36
GPHN-211ENST00000556020 TSPAN4O14817 238 aa12.81□□□□□ -0.36
GPHN-211ENST00000556020 IFNA17P01571 189 aa12.81□□□□□ -0.36
GPHN-211ENST00000556020 CTSDP07339 412 aaPredicted RBP12.81□□□□□ -0.36
GPHN-211ENST00000556020 RELQ04864 619 aaPredicted RBP12.81□□□□□ -0.36
GPHN-211ENST00000556020 FAAP20Q6NZ36 180 aa12.81□□□□□ -0.36
GPHN-211ENST00000556020 CLVS1Q8IUQ0 354 aaPredicted RBP12.81□□□□□ -0.36
GPHN-211ENST00000556020 CCDC71LQ8N9Z2 235 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms