RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 KTN1-AS1Q86SY8 53 aa1.91□□□□□ -2.1
PCNX4-206ENST00000553513 TRAPPC6BQ86SZ2 158 aa1.91□□□□□ -2.1
PCNX4-206ENST00000553513 LRRC28Q86X40 367 aaPredicted RBP1.91□□□□□ -2.1
PCNX4-206ENST00000553513 STX12Q86Y82 276 aa1.91□□□□□ -2.1
PCNX4-206ENST00000553513 BPIFA4PQ86YQ2 179 aa1.91□□□□□ -2.1
PCNX4-206ENST00000553513 OR10X1Q8NGY0 326 aa1.91□□□□□ -2.1
PCNX4-206ENST00000553513 RBM7Q9Y580 266 aaKnown RBP1.91□□□□□ -2.1
PCNX4-206ENST00000553513 KIF13BQ9NQT8 1826 aa1.91□□□□□ -2.1
PCNX4-206ENST00000553513 CCDC144AA2RUR9 1427 aa1.91□□□□□ -2.1
PCNX4-206ENST00000553513 ADGRL3Q9HAR2 1447 aa1.91□□□□□ -2.1
PCNX4-206ENST00000553513 DOCK5Q9H7D0 1870 aa1.9□□□□□ -2.1
PCNX4-206ENST00000553513 MYO16Q9Y6X6 1858 aa1.9□□□□□ -2.1
PCNX4-206ENST00000553513 HMSDA8MTL9 139 aa1.9□□□□□ -2.11
PCNX4-206ENST00000553513 ZNF189O75820 626 aaPredicted RBP1.9□□□□□ -2.11
PCNX4-206ENST00000553513 SMIM17P0DL12 118 aa1.9□□□□□ -2.11
PCNX4-206ENST00000553513 CASP1P29466 404 aa1.9□□□□□ -2.11
PCNX4-206ENST00000553513 PEBP1P30086 187 aaKnown RBP1.9□□□□□ -2.11
PCNX4-206ENST00000553513 FOXF1Q12946 379 aa1.9□□□□□ -2.11
PCNX4-206ENST00000553513 ARHGAP11BQ3KRB8 267 aa1.9□□□□□ -2.11
PCNX4-206ENST00000553513 LYRM7Q5U5X0 104 aa1.9□□□□□ -2.11
PCNX4-206ENST00000553513 DPPA3Q6W0C5 159 aa1.9□□□□□ -2.11
PCNX4-206ENST00000553513 AP3S1Q92572 193 aa1.9□□□□□ -2.11
PCNX4-206ENST00000553513 TMEM106AQ96A25 262 aa1.9□□□□□ -2.11
PCNX4-206ENST00000553513 SCGB3A1Q96QR1 104 aa1.9□□□□□ -2.11
PCNX4-206ENST00000553513 DERL1Q9BUN8 251 aa1.9□□□□□ -2.11
PCNX4-206ENST00000553513 RNASE7Q9H1E1 156 aaKnown RBP1.9□□□□□ -2.11
PCNX4-206ENST00000553513 C8orf4Q9NR00 106 aa1.9□□□□□ -2.11
PCNX4-206ENST00000553513 TVP23BQ9NYZ1 205 aa1.9□□□□□ -2.11
PCNX4-206ENST00000553513 IDI2-AS1Q9NZ38 188 aa1.9□□□□□ -2.11
PCNX4-206ENST00000553513 RALGAPA2Q2PPJ7 1873 aa1.9□□□□□ -2.11
PCNX4-206ENST00000553513 PIK3C2GO75747 1445 aa1.9□□□□□ -2.11
PCNX4-206ENST00000553513 TTC21AQ8NDW8 1320 aa1.9□□□□□ -2.11
PCNX4-206ENST00000553513 ZNF532Q9HCE3 1301 aa1.9□□□□□ -2.11
PCNX4-206ENST00000553513 NYNRINQ9P2P1 1898 aaKnown RBP1.89□□□□□ -2.11
PCNX4-206ENST00000553513 IGHV1-18A0A0C4DH31 117 aa1.89□□□□□ -2.11
PCNX4-206ENST00000553513 H3BRN7 92 aa1.89□□□□□ -2.11
PCNX4-206ENST00000553513 HMGB3O15347 200 aaKnown RBP1.89□□□□□ -2.11
PCNX4-206ENST00000553513 METTL15P1P0C7V9 234 aa1.89□□□□□ -2.11
PCNX4-206ENST00000553513 TRGC1P0CF51 173 aa1.89□□□□□ -2.11
PCNX4-206ENST00000553513 SMIM10L2AP0DMW4 78 aa1.89□□□□□ -2.11
PCNX4-206ENST00000553513 SMIM10L2BP0DMW5 78 aa1.89□□□□□ -2.11
PCNX4-206ENST00000553513 PPP1R2P41236 205 aa1.89□□□□□ -2.11
PCNX4-206ENST00000553513 VBP1P61758 197 aa1.89□□□□□ -2.11
PCNX4-206ENST00000553513 RHOBP62745 196 aa1.89□□□□□ -2.11
PCNX4-206ENST00000553513 MOGQ16653 247 aa1.89□□□□□ -2.11
PCNX4-206ENST00000553513 PPP1R2P3Q6NXS1 205 aa1.89□□□□□ -2.11
PCNX4-206ENST00000553513 AAED1Q7RTV5 226 aa1.89□□□□□ -2.11
PCNX4-206ENST00000553513 LINC00471Q8N535 108 aa1.89□□□□□ -2.11
PCNX4-206ENST00000553513 WFDC11Q8NEX6 87 aa1.89□□□□□ -2.11
PCNX4-206ENST00000553513 OR52L1Q8NGH7 329 aa1.89□□□□□ -2.11
PCNX4-206ENST00000553513 RASSF5Q8WWW0 418 aa1.89□□□□□ -2.11
PCNX4-206ENST00000553513 C11orf40Q8WZ69 217 aa1.89□□□□□ -2.11
PCNX4-206ENST00000553513 H1FXQ92522 213 aaKnown RBP1.89□□□□□ -2.11
PCNX4-206ENST00000553513 C2orf50Q96LR7 162 aa1.89□□□□□ -2.11
PCNX4-206ENST00000553513 TXNDC17Q9BRA2 123 aa1.89□□□□□ -2.11
PCNX4-206ENST00000553513 C20orf27Q9GZN8 174 aa1.89□□□□□ -2.11
PCNX4-206ENST00000553513 CHST6Q9GZX3 395 aa1.89□□□□□ -2.11
PCNX4-206ENST00000553513 ARMC1Q9NVT9 282 aa1.89□□□□□ -2.11
PCNX4-206ENST00000553513 TMSB15BA0A087X1C1 80 aa1.88□□□□□ -2.11
PCNX4-206ENST00000553513 P0DMU3 169 aa1.88□□□□□ -2.11
PCNX4-206ENST00000553513 FAM231AP0DMU4 169 aa1.88□□□□□ -2.11
PCNX4-206ENST00000553513 FAM231CP0DMU5 169 aa1.88□□□□□ -2.11
PCNX4-206ENST00000553513 SLC38A11Q08AI6 406 aa1.88□□□□□ -2.11
PCNX4-206ENST00000553513 POU6F1Q14863 301 aa1.88□□□□□ -2.11
PCNX4-206ENST00000553513 C12orf74Q32Q52 190 aa1.88□□□□□ -2.11
PCNX4-206ENST00000553513 Q6ZTI0 123 aa1.88□□□□□ -2.11
PCNX4-206ENST00000553513 CLVS1Q8IUQ0 354 aaPredicted RBP1.88□□□□□ -2.11
PCNX4-206ENST00000553513 OR11H6Q8NGC7 330 aa1.88□□□□□ -2.11
PCNX4-206ENST00000553513 SLC25A40Q8TBP6 338 aa1.88□□□□□ -2.11
PCNX4-206ENST00000553513 SELENOSQ9BQE4 189 aa1.88□□□□□ -2.11
PCNX4-206ENST00000553513 OR8D2Q9GZM6 311 aa1.88□□□□□ -2.11
PCNX4-206ENST00000553513 CST9LQ9H4G1 147 aa1.88□□□□□ -2.11
PCNX4-206ENST00000553513 V9GYQ6 96 aa1.88□□□□□ -2.11
PCNX4-206ENST00000553513 SLX4Q8IY92 1834 aa1.88□□□□□ -2.11
PCNX4-206ENST00000553513 KDM5BQ9UGL1 1544 aa1.87□□□□□ -2.11
PCNX4-206ENST00000553513 IGLV3-9A0A075B6K5 115 aa1.87□□□□□ -2.11
PCNX4-206ENST00000553513 TRBV10-2A0A0K0K1G8 114 aa1.87□□□□□ -2.11
PCNX4-206ENST00000553513 ZNF860A6NHJ4 632 aa1.87□□□□□ -2.11
PCNX4-206ENST00000553513 SDCBPO00560 298 aaPredicted RBP1.87□□□□□ -2.11
PCNX4-206ENST00000553513 ORC5O43913 435 aa1.87□□□□□ -2.11
PCNX4-206ENST00000553513 ATG12O94817 140 aa1.87□□□□□ -2.11
PCNX4-206ENST00000553513 FXYD2P54710 66 aa1.87□□□□□ -2.11
PCNX4-206ENST00000553513 YPEL3P61236 119 aaPredicted RBP1.87□□□□□ -2.11
PCNX4-206ENST00000553513 RUNX1Q01196 453 aa1.87□□□□□ -2.11
PCNX4-206ENST00000553513 TMEM42Q69YG0 159 aa1.87□□□□□ -2.11
PCNX4-206ENST00000553513 Q6Q795 121 aa1.87□□□□□ -2.11
PCNX4-206ENST00000553513 MIR17HGQ75NE6 70 aa1.87□□□□□ -2.11
PCNX4-206ENST00000553513 SLC36A1Q7Z2H8 476 aa1.87□□□□□ -2.11
PCNX4-206ENST00000553513 DYNAPQ8N1N2 210 aa1.87□□□□□ -2.11
PCNX4-206ENST00000553513 FAM172AQ8WUF8 416 aa1.87□□□□□ -2.11
PCNX4-206ENST00000553513 TTTY12Q9BZ98 90 aa1.87□□□□□ -2.11
PCNX4-206ENST00000553513 VCX3BQ9H321 246 aa1.87□□□□□ -2.11
PCNX4-206ENST00000553513 CKLFQ9UBR5 152 aa1.87□□□□□ -2.11
PCNX4-206ENST00000553513 CYSLTR1Q9Y271 337 aa1.87□□□□□ -2.11
PCNX4-206ENST00000553513 ERGIC3Q9Y282 383 aa1.87□□□□□ -2.11
PCNX4-206ENST00000553513 ARHGAP32A7KAX9 2087 aa1.87□□□□□ -2.11
PCNX4-206ENST00000553513 SCN9AQ15858 1988 aa1.87□□□□□ -2.11
PCNX4-206ENST00000553513 SLIT2O94813 1529 aa1.86□□□□□ -2.11
PCNX4-206ENST00000553513 MEIKINA0A087WXM9 373 aa1.86□□□□□ -2.11
PCNX4-206ENST00000553513 A0A0D9SG52 128 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms