RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 THYN1Q9P016 225 aa16.71■□□□□ 0.27
NEK3-202ENST00000550841 NUDT19A8MXV4 375 aa16.7■□□□□ 0.26
NEK3-202ENST00000550841 ADAP1O75689 374 aa16.7■□□□□ 0.26
NEK3-202ENST00000550841 REG1AP05451 166 aa16.7■□□□□ 0.26
NEK3-202ENST00000550841 SPNP16150 400 aa16.7■□□□□ 0.26
NEK3-202ENST00000550841 HOXA1P49639 335 aaPredicted RBP16.7■□□□□ 0.26
NEK3-202ENST00000550841 KIAA0141Q14154 515 aaPredicted RBP16.7■□□□□ 0.26
NEK3-202ENST00000550841 LCNL1Q6ZST4 164 aa16.7■□□□□ 0.26
NEK3-202ENST00000550841 OR2C3Q8N628 320 aa16.7■□□□□ 0.26
NEK3-202ENST00000550841 NECAP1Q8NC96 275 aa16.7■□□□□ 0.26
NEK3-202ENST00000550841 TRBV9A0A0B4J1U6 114 aa16.69■□□□□ 0.26
NEK3-202ENST00000550841 C13orf42A0A1B0GVH6 325 aa16.69■□□□□ 0.26
NEK3-202ENST00000550841 A0A1W2PRX2 142 aa16.69■□□□□ 0.26
NEK3-202ENST00000550841 FAM223BA6NKX1 122 aa16.69■□□□□ 0.26
NEK3-202ENST00000550841 CEBPZOSA8MTT3 80 aa16.69■□□□□ 0.26
NEK3-202ENST00000550841 FAM90A26D6RGX4 464 aa16.69■□□□□ 0.26
NEK3-202ENST00000550841 PITX3O75364 302 aa16.69■□□□□ 0.26
NEK3-202ENST00000550841 MED6O75586 246 aa16.69■□□□□ 0.26
NEK3-202ENST00000550841 SNCAP37840 140 aa16.69■□□□□ 0.26
NEK3-202ENST00000550841 SUB1P53999 127 aaKnown RBP eCLIP16.69■□□□□ 0.26
NEK3-202ENST00000550841 KLK9Q2XQG4 91 aa16.69■□□□□ 0.26
NEK3-202ENST00000550841 FAM223AQ8IWN6 122 aa16.69■□□□□ 0.26
NEK3-202ENST00000550841 OR4F17Q8NGA8 305 aa16.69■□□□□ 0.26
NEK3-202ENST00000550841 OR4F4Q96R69 305 aa16.69■□□□□ 0.26
NEK3-202ENST00000550841 HSPB7Q9UBY9 170 aa16.69■□□□□ 0.26
NEK3-202ENST00000550841 KLK9Q9UKQ9 250 aa16.69■□□□□ 0.26
NEK3-202ENST00000550841 RHOGP84095 191 aa16.68■□□□□ 0.26
NEK3-202ENST00000550841 TNFRSF9Q07011 255 aa16.68■□□□□ 0.26
NEK3-202ENST00000550841 SLC25A24Q6NUK1 477 aa16.68■□□□□ 0.26
NEK3-202ENST00000550841 KLHL30-AS1Q8NEE0 82 aa16.68■□□□□ 0.26
NEK3-202ENST00000550841 HIPK2Q9H2X6 1198 aa16.68■□□□□ 0.26
NEK3-202ENST00000550841 F11RQ9Y624 299 aaKnown RBP16.68■□□□□ 0.26
NEK3-202ENST00000550841 ADARB2-AS1A8MUL3 147 aa16.67■□□□□ 0.26
NEK3-202ENST00000550841 PRH1P02810 166 aa16.67■□□□□ 0.26
NEK3-202ENST00000550841 ATP5G2Q06055 141 aa16.67■□□□□ 0.26
NEK3-202ENST00000550841 SPINK9Q5DT21 86 aa16.67■□□□□ 0.26
NEK3-202ENST00000550841 OR1P1Q8NH06 330 aa16.67■□□□□ 0.26
NEK3-202ENST00000550841 C4orf3Q8WVX3 66 aa16.67■□□□□ 0.26
NEK3-202ENST00000550841 FANCD2OSQ96PS1 177 aa16.67■□□□□ 0.26
NEK3-202ENST00000550841 HEYLQ9NQ87 328 aaPredicted RBP16.67■□□□□ 0.26
NEK3-202ENST00000550841 FBXL7Q9UJT9 491 aa16.67■□□□□ 0.26
NEK3-202ENST00000550841 LY86O95711 162 aa16.66■□□□□ 0.26
NEK3-202ENST00000550841 RUNX1Q01196 453 aa16.66■□□□□ 0.26
NEK3-202ENST00000550841 IAH1Q2TAA2 248 aaPredicted RBP16.66■□□□□ 0.26
NEK3-202ENST00000550841 FAM209BQ5JX69 171 aa16.66■□□□□ 0.26
NEK3-202ENST00000550841 HIST2H2BDQ6DRA6 164 aa16.66■□□□□ 0.26
NEK3-202ENST00000550841 NOXA1Q86UR1 476 aa16.66■□□□□ 0.26
NEK3-202ENST00000550841 ZNF114Q8NC26 417 aa16.66■□□□□ 0.26
NEK3-202ENST00000550841 IGLV11-55A0A075B6I3 123 aa16.65■□□□□ 0.26
NEK3-202ENST00000550841 C5orf51A6NDU8 294 aa16.65■□□□□ 0.26
NEK3-202ENST00000550841 WIPF1O43516 503 aa16.65■□□□□ 0.26
NEK3-202ENST00000550841 OR2J3O76001 311 aa16.65■□□□□ 0.26
NEK3-202ENST00000550841 HTR2BP41595 481 aa16.65■□□□□ 0.26
NEK3-202ENST00000550841 TATDN3Q17R31 274 aa16.65■□□□□ 0.26
NEK3-202ENST00000550841 P2RX4Q99571 388 aa16.65■□□□□ 0.26
NEK3-202ENST00000550841 RBKSQ9H477 322 aa16.65■□□□□ 0.26
NEK3-202ENST00000550841 TENM1Q9UKZ4 2725 aa16.65■□□□□ 0.26
NEK3-202ENST00000550841 FAM25EA8MYX2 175 aa16.64■□□□□ 0.25
NEK3-202ENST00000550841 NXPH3O95157 252 aa16.64■□□□□ 0.25
NEK3-202ENST00000550841 ATP5IP56385 69 aaPredicted RBP16.64■□□□□ 0.25
NEK3-202ENST00000550841 OXA1LQ15070 435 aa16.64■□□□□ 0.25
NEK3-202ENST00000550841 GSG1LQ6UXU4 331 aa16.64■□□□□ 0.25
NEK3-202ENST00000550841 DTD1Q8TEA8 209 aa16.64■□□□□ 0.25
NEK3-202ENST00000550841 CXorf58Q96LI9 332 aa16.64■□□□□ 0.25
NEK3-202ENST00000550841 CIB3Q96Q77 187 aaPredicted RBP16.64■□□□□ 0.25
NEK3-202ENST00000550841 GNB4Q9HAV0 340 aa16.64■□□□□ 0.25
NEK3-202ENST00000550841 GSKIPQ9P0R6 139 aa16.64■□□□□ 0.25
NEK3-202ENST00000550841 U3KQ87 197 aa16.64■□□□□ 0.25
NEK3-202ENST00000550841 MPTX1A8MV57 137 aa16.63■□□□□ 0.25
NEK3-202ENST00000550841 SSNA1O43805 119 aa16.63■□□□□ 0.25
NEK3-202ENST00000550841 LGALS1P09382 135 aaKnown RBP16.63■□□□□ 0.25
NEK3-202ENST00000550841 NKX2-1P43699 371 aaPredicted RBP16.63■□□□□ 0.25
NEK3-202ENST00000550841 ID3Q02535 119 aa16.63■□□□□ 0.25
NEK3-202ENST00000550841 C15orf32Q32M92 178 aa16.63■□□□□ 0.25
NEK3-202ENST00000550841 C8orf86Q6ZUL3 223 aa16.63■□□□□ 0.25
NEK3-202ENST00000550841 ZBTB8BQ8NAP8 495 aaPredicted RBP16.63■□□□□ 0.25
NEK3-202ENST00000550841 OR4D5Q8NGN0 318 aa16.63■□□□□ 0.25
NEK3-202ENST00000550841 OR10C1Q96KK4 312 aa16.63■□□□□ 0.25
NEK3-202ENST00000550841 C2orf50Q96LR7 162 aa16.63■□□□□ 0.25
NEK3-202ENST00000550841 C7orf66A4D0T2 115 aa16.62■□□□□ 0.25
NEK3-202ENST00000550841 I3L521 148 aa16.62■□□□□ 0.25
NEK3-202ENST00000550841 CORTO00230 105 aa16.62■□□□□ 0.25
NEK3-202ENST00000550841 WRBO00258 174 aa16.62■□□□□ 0.25
NEK3-202ENST00000550841 SYNGR2O43760 224 aa16.62■□□□□ 0.25
NEK3-202ENST00000550841 NDUFB8O95169 186 aa16.62■□□□□ 0.25
NEK3-202ENST00000550841 IGHV3-11P01762 117 aa16.62■□□□□ 0.25
NEK3-202ENST00000550841 MYCNOSP40205 109 aa16.62■□□□□ 0.25
NEK3-202ENST00000550841 RPP30P78346 268 aaKnown RBP16.62■□□□□ 0.25
NEK3-202ENST00000550841 ZNF343Q6P1L6 599 aa16.62■□□□□ 0.25
NEK3-202ENST00000550841 C19orf35Q6ZS72 473 aa16.62■□□□□ 0.25
NEK3-202ENST00000550841 C18orf65Q6ZTR6 163 aa16.62■□□□□ 0.25
NEK3-202ENST00000550841 VN1R17PQ8TDU5 208 aa16.62■□□□□ 0.25
NEK3-202ENST00000550841 DPF1Q92782 380 aa16.62■□□□□ 0.25
NEK3-202ENST00000550841 EEF1AKMT3Q96AZ1 226 aa16.62■□□□□ 0.25
NEK3-202ENST00000550841 OR5B12Q96R08 314 aa16.62■□□□□ 0.25
NEK3-202ENST00000550841 TRBV7-1A0A0A6YYK4 115 aa16.61■□□□□ 0.25
NEK3-202ENST00000550841 CCL24O00175 119 aa16.61■□□□□ 0.25
NEK3-202ENST00000550841 CCSO14618 274 aa16.61■□□□□ 0.25
NEK3-202ENST00000550841 PF4P02776 101 aa16.61■□□□□ 0.25
NEK3-202ENST00000550841 HSPB1P04792 205 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms