RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 ACSM6Q6P461 480 aa8.47□□□□□ -1.05
DDB1-222ENST00000543627 SLC35G3Q8N808 338 aa8.47□□□□□ -1.05
DDB1-222ENST00000543627 OR9G4Q8NGQ1 327 aa8.47□□□□□ -1.05
DDB1-222ENST00000543627 OR5B3Q8NH48 314 aa8.47□□□□□ -1.05
DDB1-222ENST00000543627 PINX1Q96BK5 328 aaKnown RBP8.47□□□□□ -1.05
DDB1-222ENST00000543627 PLEKHA3Q9HB20 300 aa8.47□□□□□ -1.05
DDB1-222ENST00000543627 ENY2Q9NPA8 101 aa8.47□□□□□ -1.05
DDB1-222ENST00000543627 ZNF256Q9Y2P7 627 aaPredicted RBP8.47□□□□□ -1.05
DDB1-222ENST00000543627 IGLV11-55A0A075B6I3 123 aa8.46□□□□□ -1.06
DDB1-222ENST00000543627 CRYM-AS1A6NIL9 109 aa8.46□□□□□ -1.06
DDB1-222ENST00000543627 GGCTO75223 188 aaKnown RBP8.46□□□□□ -1.06
DDB1-222ENST00000543627 IGHV3-48P01763 117 aa8.46□□□□□ -1.06
DDB1-222ENST00000543627 SPNP16150 400 aa8.46□□□□□ -1.06
DDB1-222ENST00000543627 GPR183P32249 361 aa8.46□□□□□ -1.06
DDB1-222ENST00000543627 HOXA1P49639 335 aaPredicted RBP8.46□□□□□ -1.06
DDB1-222ENST00000543627 SURF2Q15527 256 aaPredicted RBP8.46□□□□□ -1.06
DDB1-222ENST00000543627 BAK1Q16611 211 aa8.46□□□□□ -1.06
DDB1-222ENST00000543627 Q56UQ5 140 aa8.46□□□□□ -1.06
DDB1-222ENST00000543627 THOC7Q6I9Y2 204 aaKnown RBP8.46□□□□□ -1.06
DDB1-222ENST00000543627 HSD17B13Q7Z5P4 300 aaPredicted RBP8.46□□□□□ -1.06
DDB1-222ENST00000543627 SELENOHQ8IZQ5 122 aaKnown RBP8.46□□□□□ -1.06
DDB1-222ENST00000543627 GDPD1Q8N9F7 314 aa8.46□□□□□ -1.06
DDB1-222ENST00000543627 TRIM63Q969Q1 353 aa8.46□□□□□ -1.06
DDB1-222ENST00000543627 CXorf58Q96LI9 332 aa8.46□□□□□ -1.06
DDB1-222ENST00000543627 SRSF8Q9BRL6 282 aaKnown RBP8.46□□□□□ -1.06
DDB1-222ENST00000543627 SRRQ9GZT4 340 aa8.46□□□□□ -1.06
DDB1-222ENST00000543627 TMEM222Q9H0R3 208 aa8.46□□□□□ -1.06
DDB1-222ENST00000543627 TMEM14BQ9NUH8 114 aa8.46□□□□□ -1.06
DDB1-222ENST00000543627 PEMTQ9UBM1 199 aa8.46□□□□□ -1.06
DDB1-222ENST00000543627 TRBV7-1A0A0A6YYK4 115 aa8.45□□□□□ -1.06
DDB1-222ENST00000543627 A0A0B4J293 547 aa8.45□□□□□ -1.06
DDB1-222ENST00000543627 A0A0G2JRQ6 117 aa8.45□□□□□ -1.06
DDB1-222ENST00000543627 OR2T8A6NH00 312 aa8.45□□□□□ -1.06
DDB1-222ENST00000543627 ST8SIA3O43173 380 aa8.45□□□□□ -1.06
DDB1-222ENST00000543627 FGF2P09038 288 aa8.45□□□□□ -1.06
DDB1-222ENST00000543627 ANXA3P12429 323 aa8.45□□□□□ -1.06
DDB1-222ENST00000543627 UCP1P25874 307 aa8.45□□□□□ -1.06
DDB1-222ENST00000543627 SNCAP37840 140 aa8.45□□□□□ -1.06
DDB1-222ENST00000543627 CCR6P51684 374 aa8.45□□□□□ -1.06
DDB1-222ENST00000543627 PLET1Q6UQ28 207 aa8.45□□□□□ -1.06
DDB1-222ENST00000543627 LHFPL5Q8TAF8 219 aa8.45□□□□□ -1.06
DDB1-222ENST00000543627 DYNLRB2Q8TF09 96 aa8.45□□□□□ -1.06
DDB1-222ENST00000543627 GLYATL2Q8WU03 294 aa8.45□□□□□ -1.06
DDB1-222ENST00000543627 RBPMSQ93062 196 aaKnown RBP8.45□□□□□ -1.06
DDB1-222ENST00000543627 GPR146Q96CH1 333 aa8.45□□□□□ -1.06
DDB1-222ENST00000543627 CCDC140Q96MF4 163 aa8.45□□□□□ -1.06
DDB1-222ENST00000543627 SLC2A8Q9NY64 477 aa8.45□□□□□ -1.06
DDB1-222ENST00000543627 DMRT1Q9Y5R6 373 aa8.45□□□□□ -1.06
DDB1-222ENST00000543627 F11RQ9Y624 299 aaKnown RBP8.45□□□□□ -1.06
DDB1-222ENST00000543627 B3GALNT1O75752 331 aa8.44□□□□□ -1.06
DDB1-222ENST00000543627 CDS2O95674 445 aa8.44□□□□□ -1.06
DDB1-222ENST00000543627 VAMP1P23763 118 aa8.44□□□□□ -1.06
DDB1-222ENST00000543627 MFAP2P55001 183 aa8.44□□□□□ -1.06
DDB1-222ENST00000543627 PRCDQ00LT1 54 aa8.44□□□□□ -1.06
DDB1-222ENST00000543627 CD69Q07108 199 aa8.44□□□□□ -1.06
DDB1-222ENST00000543627 FAM106AQ4KMX7 169 aa8.44□□□□□ -1.06
DDB1-222ENST00000543627 TMEM230Q96A57 120 aa8.44□□□□□ -1.06
DDB1-222ENST00000543627 CACNG5Q9UF02 275 aa8.44□□□□□ -1.06
DDB1-222ENST00000543627 CENPXA8MT69 81 aa8.43□□□□□ -1.06
DDB1-222ENST00000543627 CEBPZOSA8MTT3 80 aa8.43□□□□□ -1.06
DDB1-222ENST00000543627 CSN3P07498 182 aa8.43□□□□□ -1.06
DDB1-222ENST00000543627 GP9P14770 177 aa8.43□□□□□ -1.06
DDB1-222ENST00000543627 EDN2P20800 178 aa8.43□□□□□ -1.06
DDB1-222ENST00000543627 TMEM187Q14656 261 aa8.43□□□□□ -1.06
DDB1-222ENST00000543627 FAM209BQ5JX69 171 aa8.43□□□□□ -1.06
DDB1-222ENST00000543627 Q6ZRM9 215 aa8.43□□□□□ -1.06
DDB1-222ENST00000543627 CADM3Q8N126 398 aa8.43□□□□□ -1.06
DDB1-222ENST00000543627 OR2C3Q8N628 320 aa8.43□□□□□ -1.06
DDB1-222ENST00000543627 OR1L6Q8NGR2 347 aa8.43□□□□□ -1.06
DDB1-222ENST00000543627 ZNF502Q8TBZ5 544 aa8.43□□□□□ -1.06
DDB1-222ENST00000543627 SCARB1Q8WTV0 552 aa8.43□□□□□ -1.06
DDB1-222ENST00000543627 ASCL2Q99929 193 aa8.43□□□□□ -1.06
DDB1-222ENST00000543627 HEYLQ9NQ87 328 aaPredicted RBP8.43□□□□□ -1.06
DDB1-222ENST00000543627 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.43□□□□□ -1.06
DDB1-222ENST00000543627 C21orf62Q9NYP8 219 aa8.43□□□□□ -1.06
DDB1-222ENST00000543627 IGHV3OR16-8A0A075B7F1 116 aa8.42□□□□□ -1.06
DDB1-222ENST00000543627 TGOLN2O43493 480 aa8.42□□□□□ -1.06
DDB1-222ENST00000543627 YIF1AO95070 293 aa8.42□□□□□ -1.06
DDB1-222ENST00000543627 MT-CO2P00403 227 aa8.42□□□□□ -1.06
DDB1-222ENST00000543627 SUB1P53999 127 aaKnown RBP eCLIP8.42□□□□□ -1.061e-6■■■■■ 30.7
DDB1-222ENST00000543627 TM4SF20Q53R12 229 aa8.42□□□□□ -1.06
DDB1-222ENST00000543627 LYZL2Q7Z4W2 148 aa8.42□□□□□ -1.06
DDB1-222ENST00000543627 FAM219AQ8IW50 185 aa8.42□□□□□ -1.06
DDB1-222ENST00000543627 LGI3Q8N145 548 aa8.42□□□□□ -1.06
DDB1-222ENST00000543627 OR1P1Q8NH06 330 aa8.42□□□□□ -1.06
DDB1-222ENST00000543627 VN1R17PQ8TDU5 208 aa8.42□□□□□ -1.06
DDB1-222ENST00000543627 CACNG8Q8WXS5 425 aa8.42□□□□□ -1.06
DDB1-222ENST00000543627 C20orf24Q9BUV8 137 aa8.42□□□□□ -1.06
DDB1-222ENST00000543627 ZNF207O43670 478 aaKnown RBP8.41□□□□□ -1.06
DDB1-222ENST00000543627 IGLV1-51P01701 117 aa8.41□□□□□ -1.06
DDB1-222ENST00000543627 SULT1A3P0DMM9 295 aa8.41□□□□□ -1.06
DDB1-222ENST00000543627 SULT1A4P0DMN0 295 aa8.41□□□□□ -1.06
DDB1-222ENST00000543627 FOLR2P14207 255 aa8.41□□□□□ -1.06
DDB1-222ENST00000543627 MFAP4P55083 255 aa8.41□□□□□ -1.06
DDB1-222ENST00000543627 SPCS3P61009 180 aa8.41□□□□□ -1.06
DDB1-222ENST00000543627 SUPT4H1P63272 117 aaKnown RBP8.41□□□□□ -1.06
DDB1-222ENST00000543627 GUCA2BQ16661 112 aa8.41□□□□□ -1.06
DDB1-222ENST00000543627 CNPY1Q3B7I2 92 aa8.41□□□□□ -1.06
DDB1-222ENST00000543627 TMEM128Q5BJH2 165 aa8.41□□□□□ -1.06
DDB1-222ENST00000543627 IL34Q6ZMJ4 242 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms