RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 LRRC75BQ2VPJ9 315 aa7.35□□□□□ -1.23
LDHA-220ENST00000542179 FBLN7Q53RD9 439 aa7.35□□□□□ -1.23
LDHA-220ENST00000542179 RPL7L1Q6DKI1 246 aaKnown RBP7.35□□□□□ -1.23
LDHA-220ENST00000542179 CLEC9AQ6UXN8 241 aa7.35□□□□□ -1.23
LDHA-220ENST00000542179 HAPLN4Q86UW8 402 aa7.35□□□□□ -1.23
LDHA-220ENST00000542179 BAP18Q8IXM2 172 aa7.35□□□□□ -1.23
LDHA-220ENST00000542179 SLC24A4Q8NFF2 622 aa7.35□□□□□ -1.23
LDHA-220ENST00000542179 PINX1Q96BK5 328 aaKnown RBP7.35□□□□□ -1.23
LDHA-220ENST00000542179 GGACTQ9BVM4 153 aa7.35□□□□□ -1.23
LDHA-220ENST00000542179 SMIM3Q9BZL3 60 aa7.35□□□□□ -1.23
LDHA-220ENST00000542179 WFDC1Q9HC57 220 aa7.35□□□□□ -1.23
LDHA-220ENST00000542179 TET2Q6N021 2002 aaPredicted RBP7.35□□□□□ -1.23
LDHA-220ENST00000542179 PDZD2O15018 2839 aa7.34□□□□□ -1.23
LDHA-220ENST00000542179 CENPEQ02224 2701 aa7.34□□□□□ -1.23
LDHA-220ENST00000542179 A0A1B0GW64 132 aa7.34□□□□□ -1.23
LDHA-220ENST00000542179 NCBP2LA6PVI3 153 aaKnown RBP7.34□□□□□ -1.23
LDHA-220ENST00000542179 CA2P00918 260 aa7.34□□□□□ -1.23
LDHA-220ENST00000542179 IFNA10P01566 189 aa7.34□□□□□ -1.23
LDHA-220ENST00000542179 OPN1MWP04001 364 aa7.34□□□□□ -1.23
LDHA-220ENST00000542179 OPN1MW2P0DN77 364 aa7.34□□□□□ -1.23
LDHA-220ENST00000542179 OPN1MW3P0DN78 364 aa7.34□□□□□ -1.23
LDHA-220ENST00000542179 NPY1RP25929 384 aa7.34□□□□□ -1.23
LDHA-220ENST00000542179 RAB11AP62491 216 aa7.34□□□□□ -1.23
LDHA-220ENST00000542179 SSBP2P81877 361 aaPredicted RBP7.34□□□□□ -1.23
LDHA-220ENST00000542179 WT1-ASQ06250 92 aa7.34□□□□□ -1.23
LDHA-220ENST00000542179 TMEM267Q0VDI3 215 aaPredicted RBP7.34□□□□□ -1.23
LDHA-220ENST00000542179 EXOSC2Q13868 293 aaKnown RBP7.34□□□□□ -1.23
LDHA-220ENST00000542179 PLGLAQ15195 96 aa7.34□□□□□ -1.23
LDHA-220ENST00000542179 TNXAQ16473 311 aa7.34□□□□□ -1.23
LDHA-220ENST00000542179 VWC2Q2TAL6 325 aa7.34□□□□□ -1.23
LDHA-220ENST00000542179 C2orf83Q53S99 150 aa7.34□□□□□ -1.23
LDHA-220ENST00000542179 PVRIGQ6DKI7 326 aa7.34□□□□□ -1.23
LDHA-220ENST00000542179 EIF5AL1Q6IS14 154 aaKnown RBP7.34□□□□□ -1.23
LDHA-220ENST00000542179 CDPF1Q6NVV7 123 aa7.34□□□□□ -1.23
LDHA-220ENST00000542179 ZNF562Q6V9R5 426 aa7.34□□□□□ -1.23
LDHA-220ENST00000542179 TMEM217Q8N7C4 229 aa7.34□□□□□ -1.23
LDHA-220ENST00000542179 Q8N9W7 124 aa7.34□□□□□ -1.23
LDHA-220ENST00000542179 ZNF114Q8NC26 417 aa7.34□□□□□ -1.23
LDHA-220ENST00000542179 OR10P1Q8NGE3 313 aa7.34□□□□□ -1.23
LDHA-220ENST00000542179 OR10W1Q8NGF6 305 aa7.34□□□□□ -1.23
LDHA-220ENST00000542179 SCARB1Q8WTV0 552 aa7.34□□□□□ -1.23
LDHA-220ENST00000542179 TMEM170AQ8WVE7 144 aa7.34□□□□□ -1.23
LDHA-220ENST00000542179 RBM14Q96PK6 669 aaKnown RBP7.34□□□□□ -1.23
LDHA-220ENST00000542179 ATP5SQ99766 215 aa7.34□□□□□ -1.23
LDHA-220ENST00000542179 SSX3Q99909 188 aa7.34□□□□□ -1.23
LDHA-220ENST00000542179 GINS3Q9BRX5 216 aa7.34□□□□□ -1.23
LDHA-220ENST00000542179 HINT2Q9BX68 163 aa7.34□□□□□ -1.23
LDHA-220ENST00000542179 PARD6GQ9BYG4 376 aaPredicted RBP7.34□□□□□ -1.23
LDHA-220ENST00000542179 PRDM13Q9H4Q3 707 aa7.34□□□□□ -1.23
LDHA-220ENST00000542179 CSMD2Q7Z408 3487 aa7.34□□□□□ -1.23
LDHA-220ENST00000542179 KRTAP9-6A0A140TA67 174 aa7.33□□□□□ -1.24
LDHA-220ENST00000542179 IGLC7A0M8Q6 106 aa7.33□□□□□ -1.24
LDHA-220ENST00000542179 A6NDX4 124 aa7.33□□□□□ -1.24
LDHA-220ENST00000542179 TEX22C9J3V5 150 aa7.33□□□□□ -1.24
LDHA-220ENST00000542179 PRSS46E5RG02 174 aa7.33□□□□□ -1.24
LDHA-220ENST00000542179 FGF16O43320 207 aa7.33□□□□□ -1.24
LDHA-220ENST00000542179 CD5LO43866 347 aa7.33□□□□□ -1.24
LDHA-220ENST00000542179 HLA-DRB1P01911 266 aa7.33□□□□□ -1.24
LDHA-220ENST00000542179 OR8U8P0C7N1 319 aa7.33□□□□□ -1.24
LDHA-220ENST00000542179 RNASE2P10153 161 aaKnown RBP7.33□□□□□ -1.24
LDHA-220ENST00000542179 SNCAP37840 140 aa7.33□□□□□ -1.24
LDHA-220ENST00000542179 SUB1P53999 127 aaKnown RBP eCLIP7.33□□□□□ -1.243e-21■□□□□ 10.5
LDHA-220ENST00000542179 SLC38A11Q08AI6 406 aa7.33□□□□□ -1.24
LDHA-220ENST00000542179 CLINT1Q14677 625 aa7.33□□□□□ -1.24
LDHA-220ENST00000542179 C10orf55Q5SWW7 151 aa7.33□□□□□ -1.24
LDHA-220ENST00000542179 ETV3LQ6ZN32 361 aa7.33□□□□□ -1.24
LDHA-220ENST00000542179 SRSF12Q8WXF0 261 aaKnown RBP7.33□□□□□ -1.24
LDHA-220ENST00000542179 RASL11BQ9BPW5 248 aa7.33□□□□□ -1.24
LDHA-220ENST00000542179 UBQLN2Q9UHD9 624 aa7.33□□□□□ -1.24
LDHA-220ENST00000542179 SOX21Q9Y651 276 aaPredicted RBP7.33□□□□□ -1.24
LDHA-220ENST00000542179 NF1P21359 2839 aa7.33□□□□□ -1.24
LDHA-220ENST00000542179 FNDC10F2Z333 226 aa7.32□□□□□ -1.24
LDHA-220ENST00000542179 SMAD7O15105 426 aaKnown RBP7.32□□□□□ -1.24
LDHA-220ENST00000542179 CNIH1O95406 144 aa7.32□□□□□ -1.24
LDHA-220ENST00000542179 IFNA5P01569 189 aa7.32□□□□□ -1.24
LDHA-220ENST00000542179 SEC11BP0C7V7 166 aa7.32□□□□□ -1.24
LDHA-220ENST00000542179 OR13C7P0DN81 318 aa7.32□□□□□ -1.24
LDHA-220ENST00000542179 FOSL1P15407 271 aa7.32□□□□□ -1.24
LDHA-220ENST00000542179 MDKP21741 143 aaPredicted RBP7.32□□□□□ -1.24
LDHA-220ENST00000542179 GNB1P62873 340 aa7.32□□□□□ -1.24
LDHA-220ENST00000542179 CX3CL1P78423 397 aa7.32□□□□□ -1.24
LDHA-220ENST00000542179 DLK1P80370 383 aa7.32□□□□□ -1.24
LDHA-220ENST00000542179 KRTAP1-1Q07627 177 aa7.32□□□□□ -1.24
LDHA-220ENST00000542179 FXYD3Q14802 87 aa7.32□□□□□ -1.24
LDHA-220ENST00000542179 DEFB112Q30KQ8 113 aa7.32□□□□□ -1.24
LDHA-220ENST00000542179 OR8G2PQ6IF36 304 aa7.32□□□□□ -1.24
LDHA-220ENST00000542179 C16orf82Q7Z2V1 217 aa7.32□□□□□ -1.24
LDHA-220ENST00000542179 C5orf56Q8N8D9 126 aa7.32□□□□□ -1.24
LDHA-220ENST00000542179 RNASEH2CQ8TDP1 164 aaKnown RBP7.32□□□□□ -1.24
LDHA-220ENST00000542179 GNPNAT1Q96EK6 184 aaPredicted RBP7.32□□□□□ -1.24
LDHA-220ENST00000542179 SLC25A33Q9BSK2 321 aa7.32□□□□□ -1.24
LDHA-220ENST00000542179 TMEM147Q9BVK8 224 aa7.32□□□□□ -1.24
LDHA-220ENST00000542179 PITPNC1Q9UKF7 332 aa7.32□□□□□ -1.24
LDHA-220ENST00000542179 PAIP2BQ9ULR5 123 aaKnown RBP7.32□□□□□ -1.24
LDHA-220ENST00000542179 MOB4Q9Y3A3 225 aa7.32□□□□□ -1.24
LDHA-220ENST00000542179 TNCP24821 2201 aa7.31□□□□□ -1.24
LDHA-220ENST00000542179 IGHV7-81A0A0B4J1V7 117 aa7.31□□□□□ -1.24
LDHA-220ENST00000542179 H3BUX3 64 aa7.31□□□□□ -1.24
LDHA-220ENST00000542179 M0QZK8 103 aa7.31□□□□□ -1.24
LDHA-220ENST00000542179 TSPAN9O75954 239 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms