RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 CMTM3Q96MX0 182 aa3.92□□□□□ -1.78
SNHG1-207ENST00000537965 ZNF436Q9C0F3 470 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-207ENST00000537965 DCSTAMPQ9H295 470 aa3.92□□□□□ -1.78
SNHG1-207ENST00000537965 C11orf68Q9H3H3 251 aaKnown RBP3.92□□□□□ -1.78
SNHG1-207ENST00000537965 KCNK15Q9H427 330 aa3.92□□□□□ -1.78
SNHG1-207ENST00000537965 SCN3BQ9NY72 215 aa3.92□□□□□ -1.78
SNHG1-207ENST00000537965 BET1LQ9NYM9 111 aa3.92□□□□□ -1.78
SNHG1-207ENST00000537965 RBMX2Q9Y388 322 aaKnown RBP3.92□□□□□ -1.78
SNHG1-207ENST00000537965 V9GY05 133 aa3.92□□□□□ -1.78
SNHG1-207ENST00000537965 KMT2AQ03164 3969 aa3.92□□□□□ -1.78
SNHG1-207ENST00000537965 IGLV11-55A0A075B6I3 123 aa3.91□□□□□ -1.78
SNHG1-207ENST00000537965 TMEM272A0A1B0GTI8 110 aa3.91□□□□□ -1.78
SNHG1-207ENST00000537965 C15orf62A8K5M9 175 aa3.91□□□□□ -1.78
SNHG1-207ENST00000537965 KRTAP29-1A8MX34 341 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-207ENST00000537965 NDUFA4O00483 81 aa3.91□□□□□ -1.78
SNHG1-207ENST00000537965 TGOLN2O43493 480 aa3.91□□□□□ -1.78
SNHG1-207ENST00000537965 SCGNO76038 276 aa3.91□□□□□ -1.78
SNHG1-207ENST00000537965 IGHV3-23P01764 117 aa3.91□□□□□ -1.78
SNHG1-207ENST00000537965 HLA-DQB1P01920 261 aa3.91□□□□□ -1.78
SNHG1-207ENST00000537965 HIST1H1DP16402 221 aaKnown RBP3.91□□□□□ -1.78
SNHG1-207ENST00000537965 HLA-GP17693 338 aa3.91□□□□□ -1.78
SNHG1-207ENST00000537965 RPL35AP18077 110 aaKnown RBP3.91□□□□□ -1.78
SNHG1-207ENST00000537965 EDN2P20800 178 aa3.91□□□□□ -1.78
SNHG1-207ENST00000537965 ARPC4P59998 168 aa3.91□□□□□ -1.78
SNHG1-207ENST00000537965 PAFAH1B2P68402 229 aa3.91□□□□□ -1.78
SNHG1-207ENST00000537965 EWSR1Q01844 656 aaKnown RBP eCLIP3.91□□□□□ -1.78
SNHG1-207ENST00000537965 RCN1Q15293 331 aa3.91□□□□□ -1.78
SNHG1-207ENST00000537965 TMEM41BQ5BJD5 291 aa3.91□□□□□ -1.78
SNHG1-207ENST00000537965 C10orf55Q5SWW7 151 aa3.91□□□□□ -1.78
SNHG1-207ENST00000537965 OR11H2Q8NH07 326 aa3.91□□□□□ -1.78
SNHG1-207ENST00000537965 ZNF502Q8TBZ5 544 aa3.91□□□□□ -1.78
SNHG1-207ENST00000537965 CD300LFQ8TDQ1 290 aa3.91□□□□□ -1.78
SNHG1-207ENST00000537965 TCTEX1D2Q8WW35 142 aa3.91□□□□□ -1.78
SNHG1-207ENST00000537965 C5orf30Q96GV9 206 aa3.91□□□□□ -1.78
SNHG1-207ENST00000537965 COMMD5Q9GZQ3 224 aa3.91□□□□□ -1.78
SNHG1-207ENST00000537965 VCXQ9H320 206 aa3.91□□□□□ -1.78
SNHG1-207ENST00000537965 HRASLSQ9HDD0 168 aa3.91□□□□□ -1.78
SNHG1-207ENST00000537965 ACOT13Q9NPJ3 140 aa3.91□□□□□ -1.78
SNHG1-207ENST00000537965 FKBP14Q9NWM8 211 aa3.91□□□□□ -1.78
SNHG1-207ENST00000537965 FBXL17Q9UF56 701 aa3.91□□□□□ -1.78
SNHG1-207ENST00000537965 UBQLN2Q9UHD9 624 aa3.91□□□□□ -1.78
SNHG1-207ENST00000537965 KCNK7Q9Y2U2 307 aa3.91□□□□□ -1.78
SNHG1-207ENST00000537965 AK6Q9Y3D8 172 aaKnown RBP3.91□□□□□ -1.78
SNHG1-207ENST00000537965 A0A075B6Q4 140 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 IGLL5B9A064 214 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 PTGES3LE9PB15 166 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 MFNGO00587 321 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 RBFOX2O43251 390 aaKnown RBP eCLIP3.9□□□□□ -1.79
SNHG1-207ENST00000537965 HPRT1P00492 218 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 EIF4EP06730 217 aaKnown RBP3.9□□□□□ -1.79
SNHG1-207ENST00000537965 AREGP15514 252 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 NQO2P16083 231 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 GNB3P16520 340 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 CALRP27797 417 aaKnown RBP3.9□□□□□ -1.79
SNHG1-207ENST00000537965 GPR183P32249 361 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 MFAP2P55001 183 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 CLDN12P56749 244 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 RELQ04864 619 aaPredicted RBP3.9□□□□□ -1.79
SNHG1-207ENST00000537965 CATR1Q13166 79 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 TMEM187Q14656 261 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 MSMO1Q15800 293 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 ODF3L2Q3SX64 289 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 OR2B11Q5JQS5 317 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 LIPKQ5VXJ0 399 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 DGAT2L7PQ6IED9 249 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 SLC25A24Q6NUK1 477 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 CNIH2Q6PI25 160 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 UNQ9165/PRO28630Q6UXU0 137 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 SSX9Q7RTT3 188 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 VKORC1L1Q8N0U8 176 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 TMEM190Q8WZ59 177 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 BORCS5Q969J3 196 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 TMEM203Q969S6 136 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 C20orf24Q9BUV8 137 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 HRH4Q9H3N8 390 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 FKBP11Q9NYL4 201 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 SPATA2Q9UM82 520 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 TPRKBQ9Y3C4 175 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 SELENOKQ9Y6D0 94 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 S4R3C0 116 aa3.9□□□□□ -1.79
SNHG1-207ENST00000537965 TRAV1-2A0A0B4J238 106 aa3.89□□□□□ -1.79
SNHG1-207ENST00000537965 IGHV3-35A0A0C4DH35 117 aa3.89□□□□□ -1.79
SNHG1-207ENST00000537965 MFSD2BA6NFX1 497 aa3.89□□□□□ -1.79
SNHG1-207ENST00000537965 OR2T8A6NH00 312 aa3.89□□□□□ -1.79
SNHG1-207ENST00000537965 E7EUB6 86 aa3.89□□□□□ -1.79
SNHG1-207ENST00000537965 J3QRK9 145 aa3.89□□□□□ -1.79
SNHG1-207ENST00000537965 CASQ2O14958 399 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-207ENST00000537965 NUPL2O15504 423 aaKnown RBP3.89□□□□□ -1.79
SNHG1-207ENST00000537965 DFFBO76075 338 aa3.89□□□□□ -1.79
SNHG1-207ENST00000537965 REG1AP05451 166 aa3.89□□□□□ -1.79
SNHG1-207ENST00000537965 SERPINE2P07093 398 aa3.89□□□□□ -1.79
SNHG1-207ENST00000537965 CTSDP07339 412 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-207ENST00000537965 HSMCR30P0CW71 290 aa3.89□□□□□ -1.79
SNHG1-207ENST00000537965 TRAPPC2P0DI81 140 aa3.89□□□□□ -1.79
SNHG1-207ENST00000537965 TRAPPC2BP0DI82 140 aa3.89□□□□□ -1.79
SNHG1-207ENST00000537965 NFYAP23511 347 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-207ENST00000537965 MYL9P24844 172 aa3.89□□□□□ -1.79
SNHG1-207ENST00000537965 FCGR2BP31994 310 aaPredicted RBP3.89□□□□□ -1.79
SNHG1-207ENST00000537965 TAS2R31P59538 309 aa3.89□□□□□ -1.79
SNHG1-207ENST00000537965 OR2B8PP59922 312 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms