RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 BMI1P35226 326 aa9.32□□□□□ -0.92
CAPN1-223ENST00000533079 RPS16P62249 146 aaKnown RBP9.32□□□□□ -0.92
CAPN1-223ENST00000533079 PPP1R1AQ13522 171 aa9.32□□□□□ -0.92
CAPN1-223ENST00000533079 SLC38A6Q8IZM9 456 aa9.32□□□□□ -0.92
CAPN1-223ENST00000533079 ADAD2Q8NCV1 583 aaKnown RBP9.32□□□□□ -0.92
CAPN1-223ENST00000533079 TMEM230Q96A57 120 aa9.32□□□□□ -0.92
CAPN1-223ENST00000533079 GALNT14Q96FL9 552 aa9.32□□□□□ -0.92
CAPN1-223ENST00000533079 SLC22A5O76082 557 aa9.31□□□□□ -0.92
CAPN1-223ENST00000533079 KIR2DS2P43631 304 aa9.31□□□□□ -0.92
CAPN1-223ENST00000533079 RND3P61587 244 aa9.31□□□□□ -0.92
CAPN1-223ENST00000533079 HLA-DRB3P79483 266 aa9.31□□□□□ -0.92
CAPN1-223ENST00000533079 EXOSC2Q13868 293 aaKnown RBP9.31□□□□□ -0.92
CAPN1-223ENST00000533079 ANKRD55Q3KP44 614 aa9.31□□□□□ -0.92
CAPN1-223ENST00000533079 Q6ZWC4 215 aa9.31□□□□□ -0.92
CAPN1-223ENST00000533079 ABHD14BQ96IU4 210 aa9.31□□□□□ -0.92
CAPN1-223ENST00000533079 KCNIP3Q9Y2W7 256 aa9.31□□□□□ -0.92
CAPN1-223ENST00000533079 CRYM-AS1A6NIL9 109 aa9.3□□□□□ -0.92
CAPN1-223ENST00000533079 C2orf70A6NJV1 201 aa9.3□□□□□ -0.92
CAPN1-223ENST00000533079 HMSDA8MTL9 139 aa9.3□□□□□ -0.92
CAPN1-223ENST00000533079 LGALS9O00182 355 aa9.3□□□□□ -0.92
CAPN1-223ENST00000533079 PPYP01298 95 aa9.3□□□□□ -0.92
CAPN1-223ENST00000533079 SCTP09683 121 aa9.3□□□□□ -0.92
CAPN1-223ENST00000533079 OR9G9P0C7N8 305 aa9.3□□□□□ -0.92
CAPN1-223ENST00000533079 FOLR2P14207 255 aa9.3□□□□□ -0.92
CAPN1-223ENST00000533079 PGAM2P15259 253 aa9.3□□□□□ -0.92
CAPN1-223ENST00000533079 AKR1C4P17516 323 aa9.3□□□□□ -0.92
CAPN1-223ENST00000533079 APOC4P55056 127 aa9.3□□□□□ -0.92
CAPN1-223ENST00000533079 HERV-K104P61576 105 aa9.3□□□□□ -0.92
CAPN1-223ENST00000533079 SUPT4H1P63272 117 aaKnown RBP9.3□□□□□ -0.92
CAPN1-223ENST00000533079 CYCSP99999 105 aaKnown RBP9.3□□□□□ -0.92
CAPN1-223ENST00000533079 DEFA5Q01523 94 aa9.3□□□□□ -0.92
CAPN1-223ENST00000533079 IGSF11Q5DX21 431 aa9.3□□□□□ -0.92
CAPN1-223ENST00000533079 KCTD9Q7L273 389 aa9.3□□□□□ -0.92
CAPN1-223ENST00000533079 LRTM2Q8N967 370 aa9.3□□□□□ -0.92
CAPN1-223ENST00000533079 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.3□□□□□ -0.92
CAPN1-223ENST00000533079 COQ8AQ8NI60 647 aa9.3□□□□□ -0.92
CAPN1-223ENST00000533079 WDR89Q96FK6 387 aaPredicted RBP9.3□□□□□ -0.92
CAPN1-223ENST00000533079 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.29□□□□□ -0.92
CAPN1-223ENST00000533079 PIGBOS1A0A0B4J2F0 54 aa9.29□□□□□ -0.92
CAPN1-223ENST00000533079 IGKV1-6A0A0C4DH72 117 aa9.29□□□□□ -0.92
CAPN1-223ENST00000533079 MSGN1A6NI15 193 aa9.29□□□□□ -0.92
CAPN1-223ENST00000533079 UBE2CO00762 179 aa9.29□□□□□ -0.92
CAPN1-223ENST00000533079 B3GALNT1O75752 331 aa9.29□□□□□ -0.92
CAPN1-223ENST00000533079 CRYGBP07316 175 aa9.29□□□□□ -0.92
CAPN1-223ENST00000533079 H2BFSP57053 126 aa9.29□□□□□ -0.92
CAPN1-223ENST00000533079 EWSR1Q01844 656 aaKnown RBP eCLIP9.29□□□□□ -0.92
CAPN1-223ENST00000533079 TAGLNQ01995 201 aaKnown RBP9.29□□□□□ -0.92
CAPN1-223ENST00000533079 FGL1Q08830 312 aa9.29□□□□□ -0.92
CAPN1-223ENST00000533079 MSMO1Q15800 293 aa9.29□□□□□ -0.92
CAPN1-223ENST00000533079 C5orf24Q7Z6I8 188 aa9.29□□□□□ -0.92
CAPN1-223ENST00000533079 H1FOOQ8IZA3 346 aaPredicted RBP9.29□□□□□ -0.92
CAPN1-223ENST00000533079 CCDC71LQ8N9Z2 235 aa9.29□□□□□ -0.92
CAPN1-223ENST00000533079 ZNF383Q8NA42 475 aa9.29□□□□□ -0.92
CAPN1-223ENST00000533079 ZBTB8BQ8NAP8 495 aaPredicted RBP9.29□□□□□ -0.92
CAPN1-223ENST00000533079 OR2T35Q8NGX2 323 aa9.29□□□□□ -0.92
CAPN1-223ENST00000533079 PARP12Q9H0J9 701 aaKnown RBP9.29□□□□□ -0.92
CAPN1-223ENST00000533079 FXYD6Q9H0Q3 95 aa9.29□□□□□ -0.92
CAPN1-223ENST00000533079 OR2W1Q9Y3N9 320 aa9.29□□□□□ -0.92
CAPN1-223ENST00000533079 TRBV9A0A0B4J1U6 114 aa9.28□□□□□ -0.92
CAPN1-223ENST00000533079 G3V3Q6 166 aa9.28□□□□□ -0.92
CAPN1-223ENST00000533079 GOSR2O14653 212 aa9.28□□□□□ -0.92
CAPN1-223ENST00000533079 SPRY2O43597 315 aa9.28□□□□□ -0.92
CAPN1-223ENST00000533079 IGLV2-23P01705 113 aa9.28□□□□□ -0.92
CAPN1-223ENST00000533079 VAMP1P23763 118 aa9.28□□□□□ -0.92
CAPN1-223ENST00000533079 GNRHRP30968 328 aa9.28□□□□□ -0.92
CAPN1-223ENST00000533079 TCTAP57738 103 aa9.28□□□□□ -0.92
CAPN1-223ENST00000533079 RHOGP84095 191 aa9.28□□□□□ -0.92
CAPN1-223ENST00000533079 ATP5G2Q06055 141 aa9.28□□□□□ -0.92
CAPN1-223ENST00000533079 LAMTOR1Q6IAA8 161 aa9.28□□□□□ -0.92
CAPN1-223ENST00000533079 OR10J5Q8NHC4 309 aa9.28□□□□□ -0.92
CAPN1-223ENST00000533079 HARBI1Q96MB7 349 aa9.28□□□□□ -0.92
CAPN1-223ENST00000533079 NAA60Q9H7X0 242 aa9.28□□□□□ -0.92
CAPN1-223ENST00000533079 SLC35D1Q9NTN3 355 aa9.28□□□□□ -0.92
CAPN1-223ENST00000533079 VPS13DQ5THJ4 4388 aa9.27□□□□□ -0.93
CAPN1-223ENST00000533079 A8MWP6 167 aa9.27□□□□□ -0.93
CAPN1-223ENST00000533079 GPR31O00270 319 aa9.27□□□□□ -0.93
CAPN1-223ENST00000533079 MPPED1O15442 326 aa9.27□□□□□ -0.93
CAPN1-223ENST00000533079 GGCTO75223 188 aaKnown RBP9.27□□□□□ -0.93
CAPN1-223ENST00000533079 PROP1O75360 226 aa9.27□□□□□ -0.93
CAPN1-223ENST00000533079 RBMXL2O75526 392 aaKnown RBP9.27□□□□□ -0.93
CAPN1-223ENST00000533079 NFYAP23511 347 aaPredicted RBP9.27□□□□□ -0.93
CAPN1-223ENST00000533079 CEACAM6P40199 344 aa9.27□□□□□ -0.93
CAPN1-223ENST00000533079 NKX2-5P52952 324 aaPredicted RBP9.27□□□□□ -0.93
CAPN1-223ENST00000533079 PIGPP57054 158 aa9.27□□□□□ -0.93
CAPN1-223ENST00000533079 PJVKQ0ZLH3 352 aa9.27□□□□□ -0.93
CAPN1-223ENST00000533079 TMEM61Q8N0U2 210 aa9.27□□□□□ -0.93
CAPN1-223ENST00000533079 UXS1Q8NBZ7 420 aa9.27□□□□□ -0.93
CAPN1-223ENST00000533079 NECAP1Q8NC96 275 aa9.27□□□□□ -0.93
CAPN1-223ENST00000533079 ZBTB34Q8NCN2 500 aa9.27□□□□□ -0.93
CAPN1-223ENST00000533079 OR11H4Q8NGC9 324 aa9.27□□□□□ -0.93
CAPN1-223ENST00000533079 PHLDA1Q8WV24 401 aaPredicted RBP9.27□□□□□ -0.93
CAPN1-223ENST00000533079 NMES1Q9C002 83 aa9.27□□□□□ -0.93
CAPN1-223ENST00000533079 SLC2A9Q9NRM0 540 aa9.27□□□□□ -0.93
CAPN1-223ENST00000533079 KIR2DL5BA0A0G2JN68 375 aa9.26□□□□□ -0.93
CAPN1-223ENST00000533079 KIR2DL5BA0A0G2JPC4 375 aa9.26□□□□□ -0.93
CAPN1-223ENST00000533079 TEX13DA0A0J9YY54 714 aaPredicted RBP9.26□□□□□ -0.93
CAPN1-223ENST00000533079 RGS13O14921 159 aa9.26□□□□□ -0.93
CAPN1-223ENST00000533079 BET1O15155 118 aa9.26□□□□□ -0.93
CAPN1-223ENST00000533079 MED14OSP0DP75 135 aa9.26□□□□□ -0.93
CAPN1-223ENST00000533079 SLC25A4P12235 298 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms