RNA–Protein interactions for RNA: ENST00000530275.3

MACF1-230, Transcript of microtubule-actin crosslinking factor 1, humanhuman

Gene MACF1, Length 5,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-230ENST00000530275 ZNF883P0CG24 379 aa10.88□□□□□ -0.67
MACF1-230ENST00000530275 SAA1P0DJI8 122 aaPredicted RBP10.88□□□□□ -0.67
MACF1-230ENST00000530275 SAA2-SAA4A0A096LPE2 208 aa10.88□□□□□ -0.67
MACF1-230ENST00000530275 IGKV1D-43A0A0B4J1Z2 117 aa10.88□□□□□ -0.67
MACF1-230ENST00000530275 A0A0G2JK05 382 aa10.88□□□□□ -0.67
MACF1-230ENST00000530275 SAA2P0DJI9 122 aaPredicted RBP10.88□□□□□ -0.67
MACF1-230ENST00000530275 IFITM2Q01629 132 aa10.88□□□□□ -0.67
MACF1-230ENST00000530275 OR5AN1Q8NGI8 311 aa10.88□□□□□ -0.67
MACF1-230ENST00000530275 VCX2Q9H322 139 aa10.88□□□□□ -0.67
MACF1-230ENST00000530275 TMEM50AO95807 157 aa10.88□□□□□ -0.67
MACF1-230ENST00000530275 GHRHP01286 108 aa10.88□□□□□ -0.67
MACF1-230ENST00000530275 ZP1P60852 638 aa10.88□□□□□ -0.67
MACF1-230ENST00000530275 SPOCK3Q9BQ16 436 aa10.88□□□□□ -0.67
MACF1-230ENST00000530275 SLC50A1Q9BRV3 221 aa10.88□□□□□ -0.67
MACF1-230ENST00000530275 IGHV3OR16-8A0A075B7F1 116 aa10.88□□□□□ -0.67
MACF1-230ENST00000530275 PSMG4Q5JS54 123 aa10.88□□□□□ -0.67
MACF1-230ENST00000530275 C18orf12Q96KH6 178 aa10.88□□□□□ -0.67
MACF1-230ENST00000530275 PQLC2LA1A4F0 135 aa10.87□□□□□ -0.67
MACF1-230ENST00000530275 MSGN1A6NI15 193 aa10.87□□□□□ -0.67
MACF1-230ENST00000530275 C17orf100A8MU93 164 aa10.87□□□□□ -0.67
MACF1-230ENST00000530275 CD7P09564 240 aa10.87□□□□□ -0.67
MACF1-230ENST00000530275 TMEM95Q3KNT9 176 aa10.87□□□□□ -0.67
MACF1-230ENST00000530275 APOMO95445 188 aa10.87□□□□□ -0.67
MACF1-230ENST00000530275 ABHD17AQ96GS6 310 aa10.87□□□□□ -0.67
MACF1-230ENST00000530275 KIAA1217Q5T5P2 1943 aa10.87□□□□□ -0.67
MACF1-230ENST00000530275 A0A087WWC5 75 aa10.87□□□□□ -0.67
MACF1-230ENST00000530275 IGKV3D-20A0A0C4DH25 116 aa10.87□□□□□ -0.67
MACF1-230ENST00000530275 PVRIGQ6DKI7 326 aa10.87□□□□□ -0.67
MACF1-230ENST00000530275 C11orf68Q9H3H3 251 aaKnown RBP10.87□□□□□ -0.67
MACF1-230ENST00000530275 MRPS18CQ9Y3D5 142 aaKnown RBP10.87□□□□□ -0.67
MACF1-230ENST00000530275 SPCS1Q9Y6A9 102 aa10.87□□□□□ -0.67
MACF1-230ENST00000530275 UPK2O00526 184 aa10.87□□□□□ -0.67
MACF1-230ENST00000530275 IFI27P40305 119 aaPredicted RBP10.87□□□□□ -0.67
MACF1-230ENST00000530275 GNG5P63218 68 aa10.87□□□□□ -0.67
MACF1-230ENST00000530275 NPFFR1Q9GZQ6 430 aa10.87□□□□□ -0.67
MACF1-230ENST00000530275 CELA3BP08861 270 aa10.86□□□□□ -0.67
MACF1-230ENST00000530275 ZNF525Q8N782 197 aa10.86□□□□□ -0.67
MACF1-230ENST00000530275 CDKN1AP38936 164 aa10.86□□□□□ -0.67
MACF1-230ENST00000530275 PSG7Q13046 419 aa10.86□□□□□ -0.67
MACF1-230ENST00000530275 ASCL2Q99929 193 aa10.86□□□□□ -0.67
MACF1-230ENST00000530275 A0A1B0GV72 72 aa10.86□□□□□ -0.67
MACF1-230ENST00000530275 PRDM6Q9NQX0 595 aa10.86□□□□□ -0.67
MACF1-230ENST00000530275 DOCK5Q9H7D0 1870 aa10.86□□□□□ -0.67
MACF1-230ENST00000530275 ATAD5Q96QE3 1844 aa10.86□□□□□ -0.67
MACF1-230ENST00000530275 HIGD1CA8MV81 97 aa10.86□□□□□ -0.67
MACF1-230ENST00000530275 GATA2P23769 480 aaPredicted RBP10.86□□□□□ -0.67
MACF1-230ENST00000530275 PLPPR1Q8TBJ4 325 aa10.86□□□□□ -0.67
MACF1-230ENST00000530275 GLMPQ8WWB7 406 aa10.86□□□□□ -0.67
MACF1-230ENST00000530275 THSD7AQ9UPZ6 1657 aa10.86□□□□□ -0.67
MACF1-230ENST00000530275 DUSP14O95147 198 aaKnown RBP10.86□□□□□ -0.67
MACF1-230ENST00000530275 PGPEP1LA6NFU8 196 aa10.85□□□□□ -0.67
MACF1-230ENST00000530275 IGHV4-39P01824 125 aa10.85□□□□□ -0.67
MACF1-230ENST00000530275 C9orf106Q8NAJ2 232 aa10.85□□□□□ -0.67
MACF1-230ENST00000530275 REPIN1Q9BWE0 567 aaKnown RBP10.85□□□□□ -0.67
MACF1-230ENST00000530275 PRSS22Q9GZN4 317 aa10.85□□□□□ -0.67
MACF1-230ENST00000530275 MYO9BQ13459 2157 aa10.85□□□□□ -0.67
MACF1-230ENST00000530275 C15orf61A6NNL5 157 aa10.85□□□□□ -0.67
MACF1-230ENST00000530275 CA1P00915 261 aaPredicted RBP10.85□□□□□ -0.67
MACF1-230ENST00000530275 ZNF688P0C7X2 276 aa10.85□□□□□ -0.67
MACF1-230ENST00000530275 JMJD8Q96S16 334 aa10.85□□□□□ -0.67
MACF1-230ENST00000530275 CRPP02741 224 aa10.85□□□□□ -0.67
MACF1-230ENST00000530275 TDRD15B5MCY1 1934 aaKnown RBP10.85□□□□□ -0.67
MACF1-230ENST00000530275 FABP5P3A8MUU1 101 aa10.85□□□□□ -0.67
MACF1-230ENST00000530275 TYMSP04818 313 aa10.85□□□□□ -0.67
MACF1-230ENST00000530275 RNASE6Q93091 150 aaKnown RBP10.85□□□□□ -0.67
MACF1-230ENST00000530275 ARFGEF1Q9Y6D6 1849 aa10.84□□□□□ -0.67
MACF1-230ENST00000530275 CEACAM1P13688 526 aa10.84□□□□□ -0.67
MACF1-230ENST00000530275 PHLDA1Q8WV24 401 aaPredicted RBP10.84□□□□□ -0.67
MACF1-230ENST00000530275 ZNF257Q9Y2Q1 563 aa10.84□□□□□ -0.67
MACF1-230ENST00000530275 SRSF1Q07955 248 aaKnown RBP eCLIP10.84□□□□□ -0.67
MACF1-230ENST00000530275 KIR3DL3Q8N743 410 aa10.84□□□□□ -0.67
MACF1-230ENST00000530275 TRGV11A0A075B6L2 103 aa10.84□□□□□ -0.67
MACF1-230ENST00000530275 TRAV14DV4A0A0A6YYC5 116 aa10.84□□□□□ -0.67
MACF1-230ENST00000530275 YPEL1O60688 119 aa10.84□□□□□ -0.67
MACF1-230ENST00000530275 PAX2Q02962 417 aa10.84□□□□□ -0.67
MACF1-230ENST00000530275 NIT1Q86X76 327 aa10.84□□□□□ -0.67
MACF1-230ENST00000530275 FAM19A2Q8N3H0 131 aa10.84□□□□□ -0.67
MACF1-230ENST00000530275 YPEL2Q96QA6 119 aa10.84□□□□□ -0.67
MACF1-230ENST00000530275 ST6GALNAC3Q8NDV1 305 aa10.84□□□□□ -0.67
MACF1-230ENST00000530275 STRCP1A6NGW2 1772 aa10.84□□□□□ -0.67
MACF1-230ENST00000530275 TRBV6-7A0A0A0MS04 114 aa10.84□□□□□ -0.67
MACF1-230ENST00000530275 TRAV21A0A0B4J279 112 aa10.84□□□□□ -0.67
MACF1-230ENST00000530275 ADMP35318 185 aa10.84□□□□□ -0.67
MACF1-230ENST00000530275 NXT2Q9NPJ8 142 aaKnown RBP10.84□□□□□ -0.67
MACF1-230ENST00000530275 LAIR2Q6ISS4 152 aa10.83□□□□□ -0.68
MACF1-230ENST00000530275 TRPM6Q9BX84 2022 aa10.83□□□□□ -0.68
MACF1-230ENST00000530275 THBDP07204 575 aa10.83□□□□□ -0.68
MACF1-230ENST00000530275 CCL3L1P16619 93 aa10.83□□□□□ -0.68
MACF1-230ENST00000530275 TMEM144Q7Z5S9 345 aa10.83□□□□□ -0.68
MACF1-230ENST00000530275 TMEM133Q9H2Q1 129 aa10.83□□□□□ -0.68
MACF1-230ENST00000530275 RNF125Q96EQ8 232 aa10.83□□□□□ -0.68
MACF1-230ENST00000530275 RNASE7Q9H1E1 156 aaKnown RBP10.83□□□□□ -0.68
MACF1-230ENST00000530275 SCN3AQ9NY46 2000 aa10.83□□□□□ -0.68
MACF1-230ENST00000530275 TCRBV4S1A1TA0A5B7 111 aa10.83□□□□□ -0.68
MACF1-230ENST00000530275 IGFBP3P17936 291 aaPredicted RBP10.83□□□□□ -0.68
MACF1-230ENST00000530275 GTSCR1Q86UQ5 136 aa10.83□□□□□ -0.68
MACF1-230ENST00000530275 RNF182Q8N6D2 247 aa10.83□□□□□ -0.68
MACF1-230ENST00000530275 VGLL1Q99990 258 aa10.83□□□□□ -0.68
MACF1-230ENST00000530275 RBBP6Q7Z6E9 1792 aaKnown RBP10.83□□□□□ -0.68
MACF1-230ENST00000530275 TRAV12-3A0A0B4J271 114 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 205.9 ms