RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 ALX4Q9H161 411 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 NDUFA4L2Q9NRX3 87 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 GAR1Q9NY12 217 aaKnown RBP4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 PEMTQ9UBM1 199 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 CACNG5Q9UF02 275 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 F11RQ9Y624 299 aaKnown RBP4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 TMEM56-RWDD3S4R434 201 aa4.18□□□□□ -1.74
HMGB1P40-201ENST00000525121 TENM1Q9UKZ4 2725 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 IGLV11-55A0A075B6I3 123 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 A0A0B4J2A0 478 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 A0A1B0GW64 132 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 CGB1A6NKQ9 187 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 CEBPZOSA8MTT3 80 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 E7EUB6 86 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 CORTO00230 105 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 ST8SIA3O43173 380 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 LYRM1O43325 122 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 GGCTO75223 188 aaKnown RBP4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 NDUFB8O95169 186 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 SFT2D2O95562 160 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 IFNA21P01568 189 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 HLA-AP01891 365 aaKnown RBP4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 ARL3P36405 182 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 SLURP1P55000 103 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 DEFA1P59665 94 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 DEFA3P59666 94 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 SPCS3P61009 180 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 WT1-ASQ06250 92 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 TMEM187Q14656 261 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 SMCO1Q147U7 214 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 IZUMO4Q1ZYL8 232 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 BEAN1Q3B7T3 259 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 FAM106AQ4KMX7 169 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 Q56UQ5 140 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 SPINK9Q5DT21 86 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 NOXA1Q86UR1 476 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 UBAC2Q8NBM4 344 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 OR1P1Q8NH06 330 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 OR1S1Q8NH92 325 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 VN1R17PQ8TDU5 208 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 DCUN1D4Q92564 292 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 TMEM230Q96A57 120 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 MISP3Q96FF7 219 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 HIPK2Q9H2X6 1198 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 HEYLQ9NQ87 328 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 SHPKQ9UHJ6 478 aa4.17□□□□□ -1.74
HMGB1P40-201ENST00000525121 A0A0B4J293 547 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 A0A1B0GU03 582 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 FAM240BA0A1B0GVZ2 78 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 RPS10-NUDT3A0A1W2PQS6 291 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 DBX1A6NMT0 343 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 NUPL2O15504 423 aaKnown RBP4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 MED6O75586 246 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 UPK1BO75841 260 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 LY86O95711 162 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 IGHV3-23P01764 117 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 P0C879 139 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 GPR183P32249 361 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 HTR2BP41595 481 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 SYNJ2BPP57105 145 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 SUPT4H1P63272 117 aaKnown RBP4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 PPP1R1AQ13522 171 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 KPRPQ5T749 579 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 SPSB3Q6PJ21 355 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 PLET1Q6UQ28 207 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 CLEC19AQ6UXS0 136 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 C19orf35Q6ZS72 473 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 LYG2Q86SG7 212 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 OR2C3Q8N628 320 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 ZNF114Q8NC26 417 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 OR9G4Q8NGQ1 327 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 OR52E5Q8NH55 327 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 LHFPL5Q8TAF8 219 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 ENKURQ8TC29 256 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 DYNLRB2Q8TF09 96 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 DLX4Q92988 240 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 PINX1Q96BK5 328 aaKnown RBP4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 GPR146Q96CH1 333 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 BSCL2Q96G97 398 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 FANCD2OSQ96PS1 177 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 ATP6V0BQ99437 205 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 SDHCQ99643 169 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 C20orf85Q9H1P6 137 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 PALMDQ9NP74 551 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 C21orf62Q9NYP8 219 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 PRR13Q9NZ81 148 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 TMED3Q9Y3Q3 217 aa4.16□□□□□ -1.74
HMGB1P40-201ENST00000525121 FBN3Q75N90 2809 aa4.15□□□□□ -1.74
HMGB1P40-201ENST00000525121 ANK2Q01484 3957 aa4.15□□□□□ -1.74
HMGB1P40-201ENST00000525121 A0A0G2JRQ6 117 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 ZNF320A2RRD8 509 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 C9orf170A2RU37 121 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 MFSD2BA6NFX1 497 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 OR2T8A6NH00 312 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 PPP5D1E7EU14 171 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 INS-IGF2F8WCM5 200 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 BMPR1BO00238 502 aa4.15□□□□□ -1.75
HMGB1P40-201ENST00000525121 WRBO00258 174 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms