RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 MBNL3Q9NUK0 354 aaKnown RBP6.25□□□□□ -1.41
HDAC3-216ENST00000523088 KLF13Q9Y2Y9 288 aaPredicted RBP6.25□□□□□ -1.41
HDAC3-216ENST00000523088 CSAG2Q9Y5P2 127 aa6.25□□□□□ -1.41
HDAC3-216ENST00000523088 NCOA6Q14686 2063 aaPredicted RBP6.25□□□□□ -1.41
HDAC3-216ENST00000523088 CREBBPQ92793 2442 aa6.24□□□□□ -1.41
HDAC3-216ENST00000523088 IGKV3D-11A0A0A0MRZ8 115 aa6.24□□□□□ -1.41
HDAC3-216ENST00000523088 TRAV5A0A0B4J249 113 aa6.24□□□□□ -1.41
HDAC3-216ENST00000523088 IRGMA1A4Y4 181 aa6.24□□□□□ -1.41
HDAC3-216ENST00000523088 CCDC179H3BU77 68 aa6.24□□□□□ -1.41
HDAC3-216ENST00000523088 TAPBPO15533 448 aa6.24□□□□□ -1.41
HDAC3-216ENST00000523088 EEF1E1O43324 174 aaKnown RBP6.24□□□□□ -1.41
HDAC3-216ENST00000523088 NCR2O95944 276 aa6.24□□□□□ -1.41
HDAC3-216ENST00000523088 H2BFMP0C1H6 154 aa6.24□□□□□ -1.41
HDAC3-216ENST00000523088 GATA1P15976 413 aaPredicted RBP6.24□□□□□ -1.41
HDAC3-216ENST00000523088 PRSS3P35030 304 aa6.24□□□□□ -1.41
HDAC3-216ENST00000523088 H2BFSP57053 126 aa6.24□□□□□ -1.41
HDAC3-216ENST00000523088 FOXF1Q12946 379 aa6.24□□□□□ -1.41
HDAC3-216ENST00000523088 IL13RA2Q14627 380 aa6.24□□□□□ -1.41
HDAC3-216ENST00000523088 OR1C1Q15619 314 aa6.24□□□□□ -1.41
HDAC3-216ENST00000523088 SFRP4Q6FHJ7 346 aaPredicted RBP6.24□□□□□ -1.41
HDAC3-216ENST00000523088 FAM231DQ6ZW35 169 aa6.24□□□□□ -1.41
HDAC3-216ENST00000523088 RPS19BP1Q86WX3 136 aaKnown RBP6.24□□□□□ -1.41
HDAC3-216ENST00000523088 PAQR4Q8N4S7 273 aaPredicted RBP6.24□□□□□ -1.41
HDAC3-216ENST00000523088 OR10P1Q8NGE3 313 aa6.24□□□□□ -1.41
HDAC3-216ENST00000523088 ZNF502Q8TBZ5 544 aa6.24□□□□□ -1.41
HDAC3-216ENST00000523088 ARPC1AQ92747 370 aa6.24□□□□□ -1.41
HDAC3-216ENST00000523088 DEFB126Q9BYW3 111 aa6.24□□□□□ -1.41
HDAC3-216ENST00000523088 TMEM191AQ9H0A3 160 aa6.24□□□□□ -1.41
HDAC3-216ENST00000523088 VSIRQ9H7M9 311 aa6.24□□□□□ -1.41
HDAC3-216ENST00000523088 PROCRQ9UNN8 238 aa6.24□□□□□ -1.41
HDAC3-216ENST00000523088 DNAJC13O75165 2243 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 TRAV24A0A0B4J272 114 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 TRGV8A0A0C4DH27 118 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 A1L4Q6 167 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 RBFOX3A6NFN3 312 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 FAM220BPB1ANY3 271 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 C17orf112F2Z3M2 114 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 PRRG2O14669 202 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 ZFAND5O76080 213 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 WISP3O95389 354 aaPredicted RBP6.23□□□□□ -1.41
HDAC3-216ENST00000523088 PMS2P2O95744 297 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 GPANK1O95872 356 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 C1QAP02745 245 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 SBK3P0C264 359 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 BCL3P20749 454 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 FAUP35544 74 aaKnown RBP6.23□□□□□ -1.41
HDAC3-216ENST00000523088 HBMQ6B0K9 141 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 MFSD12Q6NUT3 480 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 AMTNQ6UX39 209 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 ZCCHC23Q6ZST2 131 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 Q6ZVH6 145 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 ZNF295-AS1Q8N0V1 137 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 GCSAMQ8N6F7 178 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 MORN4Q8NDC4 146 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 SMIM4Q8WVI0 70 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 PLPPR2Q96GM1 343 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 SEC22AQ96IW7 307 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 LINC00477Q96M19 166 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 LINC01587Q99440 93 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 KIR2DL4Q99706 377 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 AGMATQ9BSE5 352 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 RTBDNQ9BSG5 229 aaPredicted RBP6.23□□□□□ -1.41
HDAC3-216ENST00000523088 RETNQ9HD89 108 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 CYTL1Q9NRR1 136 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 MPC1Q9Y5U8 109 aa6.23□□□□□ -1.41
HDAC3-216ENST00000523088 PHF3Q92576 2039 aaKnown RBP6.23□□□□□ -1.41
HDAC3-216ENST00000523088 PKDREJQ9NTG1 2253 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 IGHV3-20A0A0C4DH32 117 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 LOC102725191A0A1B0GVB3 256 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 FAM231BA6NCW3 169 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 C15orf61A6NNL5 157 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 CXorf49A8MYA2 514 aaPredicted RBP6.22□□□□□ -1.41
HDAC3-216ENST00000523088 GGTLC3B5MD39 225 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 DIRC3C9JPN6 131 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 H3BTX0 84 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 CCL21O00585 134 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 NEURL1O76050 574 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 GYPAP02724 150 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 STATHP02808 62 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 GRPP07492 148 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 CELA3BP08861 270 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 LYL1P12980 280 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 IGFBP3P17936 291 aaPredicted RBP6.22□□□□□ -1.41
HDAC3-216ENST00000523088 ELK1P19419 428 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 SSR4P51571 173 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 HILS1P60008 231 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 HLA-DRB3P79483 266 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 CYCSP99999 105 aaKnown RBP6.22□□□□□ -1.41
HDAC3-216ENST00000523088 KIAA0040Q15053 153 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 VAX1Q5SQQ9 334 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 SERTAD4-AS1Q5TG53 156 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 ASPHD1Q5U4P2 390 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 ZNF880Q6PDB4 577 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 SLC25A48Q6ZT89 311 aaKnown RBP6.22□□□□□ -1.41
HDAC3-216ENST00000523088 RNF144BQ7Z419 303 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 PRR22Q8IZ63 422 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 SCCPDHQ8NBX0 429 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 OR10J6PQ8NGY7 276 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 CMTM2Q8TAZ6 248 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 GNPNAT1Q96EK6 184 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms