RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 ZNF355PQ9NSJ1 428 aa14.04□□□□□ -0.16
VEGFA-222ENST00000520948 CACNG5Q9UF02 275 aa14.04□□□□□ -0.16
VEGFA-222ENST00000520948 TMED3Q9Y3Q3 217 aa14.04□□□□□ -0.16
VEGFA-222ENST00000520948 A0A1B0GU03 582 aa14.03□□□□□ -0.16
VEGFA-222ENST00000520948 PITX3O75364 302 aa14.03□□□□□ -0.16
VEGFA-222ENST00000520948 PF4P02776 101 aa14.03□□□□□ -0.16
VEGFA-222ENST00000520948 PRH1P02810 166 aa14.03□□□□□ -0.16
VEGFA-222ENST00000520948 IL5P05113 134 aa14.03□□□□□ -0.16
VEGFA-222ENST00000520948 REG1AP05451 166 aa14.03□□□□□ -0.16
VEGFA-222ENST00000520948 OR13C7P0DN81 318 aa14.03□□□□□ -0.16
VEGFA-222ENST00000520948 SLC25A6P12236 298 aa14.03□□□□□ -0.16
VEGFA-222ENST00000520948 RAB25P57735 213 aa14.03□□□□□ -0.16
VEGFA-222ENST00000520948 TPPP2P59282 170 aa14.03□□□□□ -0.16
VEGFA-222ENST00000520948 KHDC1LQ5JSQ8 128 aa14.03□□□□□ -0.16
VEGFA-222ENST00000520948 C4orf3Q8WVX3 66 aa14.03□□□□□ -0.16
VEGFA-222ENST00000520948 MARVELD1Q9BSK0 173 aa14.03□□□□□ -0.16
VEGFA-222ENST00000520948 PALMDQ9NP74 551 aa14.03□□□□□ -0.16
VEGFA-222ENST00000520948 DMRT1Q9Y5R6 373 aa14.03□□□□□ -0.16
VEGFA-222ENST00000520948 KMT2CQ8NEZ4 4911 aaKnown RBP14.02□□□□□ -0.16
VEGFA-222ENST00000520948 SULT1A3P0DMM9 295 aa14.02□□□□□ -0.17
VEGFA-222ENST00000520948 SULT1A4P0DMN0 295 aa14.02□□□□□ -0.17
VEGFA-222ENST00000520948 SMCO1Q147U7 214 aa14.02□□□□□ -0.17
VEGFA-222ENST00000520948 ETV3LQ6ZN32 361 aa14.02□□□□□ -0.17
VEGFA-222ENST00000520948 C8orf86Q6ZUL3 223 aa14.02□□□□□ -0.17
VEGFA-222ENST00000520948 OR2C3Q8N628 320 aa14.02□□□□□ -0.17
VEGFA-222ENST00000520948 KLHL30-AS1Q8NEE0 82 aa14.02□□□□□ -0.17
VEGFA-222ENST00000520948 COQ8AQ8NI60 647 aa14.02□□□□□ -0.17
VEGFA-222ENST00000520948 USMG5Q96IX5 58 aa14.02□□□□□ -0.17
VEGFA-222ENST00000520948 HINT2Q9BX68 163 aa14.02□□□□□ -0.17
VEGFA-222ENST00000520948 IGLV11-55A0A075B6I3 123 aa14.01□□□□□ -0.17
VEGFA-222ENST00000520948 A0A0G2JLM5 398 aa14.01□□□□□ -0.17
VEGFA-222ENST00000520948 WI2-2373I1.2A0A1W2PRP0 233 aa14.01□□□□□ -0.17
VEGFA-222ENST00000520948 ADAP1O75689 374 aa14.01□□□□□ -0.17
VEGFA-222ENST00000520948 IFNA17P01571 189 aa14.01□□□□□ -0.17
VEGFA-222ENST00000520948 HOXB5P09067 269 aa14.01□□□□□ -0.17
VEGFA-222ENST00000520948 MFAP2P55001 183 aa14.01□□□□□ -0.17
VEGFA-222ENST00000520948 SPCS3P61009 180 aa14.01□□□□□ -0.17
VEGFA-222ENST00000520948 DEFB121Q5J5C9 76 aa14.01□□□□□ -0.17
VEGFA-222ENST00000520948 GGNBP1Q5YKI7 109 aa14.01□□□□□ -0.17
VEGFA-222ENST00000520948 ZNF431Q8TF32 576 aaPredicted RBP14.01□□□□□ -0.17
VEGFA-222ENST00000520948 SEC22CQ9BRL7 303 aa14.01□□□□□ -0.17
VEGFA-222ENST00000520948 NBEAL2Q6ZNJ1 2754 aa14.01□□□□□ -0.17
VEGFA-222ENST00000520948 FAM223BA6NKX1 122 aa14□□□□□ -0.17
VEGFA-222ENST00000520948 DHFRP00374 187 aa14□□□□□ -0.17
VEGFA-222ENST00000520948 SPNP16150 400 aa14□□□□□ -0.17
VEGFA-222ENST00000520948 HIST1H1BP16401 226 aaKnown RBP14□□□□□ -0.17
VEGFA-222ENST00000520948 KRTAP10-11P60412 298 aa14□□□□□ -0.17
VEGFA-222ENST00000520948 RHOGP84095 191 aa14□□□□□ -0.17
VEGFA-222ENST00000520948 PLET1Q6UQ28 207 aa14□□□□□ -0.17
VEGFA-222ENST00000520948 FAM223AQ8IWN6 122 aa14□□□□□ -0.17
VEGFA-222ENST00000520948 ZNF114Q8NC26 417 aa14□□□□□ -0.17
VEGFA-222ENST00000520948 NECAP1Q8NC96 275 aa14□□□□□ -0.17
VEGFA-222ENST00000520948 RAX2Q96IS3 184 aa14□□□□□ -0.17
VEGFA-222ENST00000520948 P2RX4Q99571 388 aa14□□□□□ -0.17
VEGFA-222ENST00000520948 HSPB7Q9UBY9 170 aa14□□□□□ -0.17
VEGFA-222ENST00000520948 CACFD1Q9UGQ2 172 aa14□□□□□ -0.17
VEGFA-222ENST00000520948 F11RQ9Y624 299 aaKnown RBP14□□□□□ -0.17
VEGFA-222ENST00000520948 NUDT19A8MXV4 375 aa13.99□□□□□ -0.17
VEGFA-222ENST00000520948 INMT-MINDY4F8WBC2 141 aa13.99□□□□□ -0.17
VEGFA-222ENST00000520948 NDUFB8O95169 186 aa13.99□□□□□ -0.17
VEGFA-222ENST00000520948 LGALS1P09382 135 aaKnown RBP13.99□□□□□ -0.17
VEGFA-222ENST00000520948 HOXD3P31249 432 aaPredicted RBP13.99□□□□□ -0.17
VEGFA-222ENST00000520948 MYCNOSP40205 109 aa13.99□□□□□ -0.17
VEGFA-222ENST00000520948 DEFA5Q01523 94 aa13.99□□□□□ -0.17
VEGFA-222ENST00000520948 SPINK9Q5DT21 86 aa13.99□□□□□ -0.17
VEGFA-222ENST00000520948 PVRIGQ6DKI7 326 aa13.99□□□□□ -0.17
VEGFA-222ENST00000520948 ZNF343Q6P1L6 599 aa13.99□□□□□ -0.17
VEGFA-222ENST00000520948 PDCD10Q9BUL8 212 aa13.99□□□□□ -0.17
VEGFA-222ENST00000520948 PLEKHA3Q9HB20 300 aa13.99□□□□□ -0.17
VEGFA-222ENST00000520948 C13orf42A0A1B0GVH6 325 aa13.98□□□□□ -0.17
VEGFA-222ENST00000520948 MPTX1A8MV57 137 aa13.98□□□□□ -0.17
VEGFA-222ENST00000520948 OR2J3O76001 311 aa13.98□□□□□ -0.17
VEGFA-222ENST00000520948 IGHV3-11P01762 117 aa13.98□□□□□ -0.17
VEGFA-222ENST00000520948 DEFA4P12838 97 aa13.98□□□□□ -0.17
VEGFA-222ENST00000520948 ERHP84090 104 aaKnown RBP13.98□□□□□ -0.17
VEGFA-222ENST00000520948 TNFRSF9Q07011 255 aa13.98□□□□□ -0.17
VEGFA-222ENST00000520948 FHL3Q13643 280 aa13.98□□□□□ -0.17
VEGFA-222ENST00000520948 BSXQ3C1V8 233 aa13.98□□□□□ -0.17
VEGFA-222ENST00000520948 MRPL41Q8IXM3 137 aaKnown RBP13.98□□□□□ -0.17
VEGFA-222ENST00000520948 C12orf45Q8N5I9 185 aaPredicted RBP13.98□□□□□ -0.17
VEGFA-222ENST00000520948 OR1P1Q8NH06 330 aa13.98□□□□□ -0.17
VEGFA-222ENST00000520948 RCC1LQ96I51 464 aaKnown RBP13.98□□□□□ -0.17
VEGFA-222ENST00000520948 OR5B12Q96R08 314 aa13.98□□□□□ -0.17
VEGFA-222ENST00000520948 FBXL7Q9UJT9 491 aa13.98□□□□□ -0.17
VEGFA-222ENST00000520948 COL7A1Q02388 2944 aa13.98□□□□□ -0.17
VEGFA-222ENST00000520948 CCL24O00175 119 aa13.97□□□□□ -0.17
VEGFA-222ENST00000520948 PRAF2O60831 178 aa13.97□□□□□ -0.17
VEGFA-222ENST00000520948 PTTG1O95997 202 aa13.97□□□□□ -0.17
VEGFA-222ENST00000520948 ATP5G2Q06055 141 aa13.97□□□□□ -0.17
VEGFA-222ENST00000520948 DCTN2Q13561 401 aaKnown RBP13.97□□□□□ -0.17
VEGFA-222ENST00000520948 DEFB136Q30KP8 78 aa13.97□□□□□ -0.17
VEGFA-222ENST00000520948 OR11H1Q8NG94 326 aa13.97□□□□□ -0.17
VEGFA-222ENST00000520948 OR1L6Q8NGR2 347 aa13.97□□□□□ -0.17
VEGFA-222ENST00000520948 OR1S1Q8NH92 325 aa13.97□□□□□ -0.17
VEGFA-222ENST00000520948 FAM90A26D6RGX4 464 aa13.96□□□□□ -0.17
VEGFA-222ENST00000520948 RNASE2P10153 161 aaKnown RBP13.96□□□□□ -0.17
VEGFA-222ENST00000520948 C15orf32Q32M92 178 aa13.96□□□□□ -0.17
VEGFA-222ENST00000520948 SLC25A24Q6NUK1 477 aa13.96□□□□□ -0.17
VEGFA-222ENST00000520948 OR1N2Q8NGR9 330 aa13.96□□□□□ -0.17
VEGFA-222ENST00000520948 OR10C1Q96KK4 312 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms