RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 RANGRFQ9HD47 186 aaPredicted RBP14.17□□□□□ -0.14
TFF3-204ENST00000518498 NSG2Q9Y328 171 aa14.17□□□□□ -0.14
TFF3-204ENST00000518498 OR51B2Q9Y5P1 312 aa14.17□□□□□ -0.14
TFF3-204ENST00000518498 U3KQK5 164 aa14.17□□□□□ -0.14
TFF3-204ENST00000518498 TRAV3A0A0B4J244 114 aa14.16□□□□□ -0.14
TFF3-204ENST00000518498 CCL24O00175 119 aa14.16□□□□□ -0.14
TFF3-204ENST00000518498 SCGB1D2O95969 90 aa14.16□□□□□ -0.14
TFF3-204ENST00000518498 IFNA17P01571 189 aa14.16□□□□□ -0.14
TFF3-204ENST00000518498 PSMB6P28072 239 aa14.16□□□□□ -0.14
TFF3-204ENST00000518498 OR2B8PP59922 312 aa14.16□□□□□ -0.14
TFF3-204ENST00000518498 HSPE1P61604 102 aaKnown RBP14.16□□□□□ -0.14
TFF3-204ENST00000518498 TNFRSF9Q07011 255 aa14.16□□□□□ -0.14
TFF3-204ENST00000518498 TEX38Q6PEX7 206 aa14.16□□□□□ -0.14
TFF3-204ENST00000518498 STPG2Q8N412 459 aa14.16□□□□□ -0.14
TFF3-204ENST00000518498 PPP1R1CQ8WVI7 109 aa14.16□□□□□ -0.14
TFF3-204ENST00000518498 RBMXL1Q96E39 390 aaKnown RBP14.16□□□□□ -0.14
TFF3-204ENST00000518498 ST6GAL2Q96JF0 529 aa14.16□□□□□ -0.14
TFF3-204ENST00000518498 DUX3Q96PT4 197 aa14.16□□□□□ -0.14
TFF3-204ENST00000518498 CLCC1Q96S66 551 aa14.16□□□□□ -0.14
TFF3-204ENST00000518498 HSPB7Q9UBY9 170 aa14.16□□□□□ -0.14
TFF3-204ENST00000518498 HLA-DRB1P01911 266 aa14.15□□□□□ -0.14
TFF3-204ENST00000518498 PVALBP20472 110 aaPredicted RBP14.15□□□□□ -0.14
TFF3-204ENST00000518498 TNXAQ16473 311 aa14.15□□□□□ -0.14
TFF3-204ENST00000518498 ZNF562Q6V9R5 426 aa14.15□□□□□ -0.14
TFF3-204ENST00000518498 OR2T35Q8NGX2 323 aa14.15□□□□□ -0.14
TFF3-204ENST00000518498 RAX2Q96IS3 184 aa14.15□□□□□ -0.14
TFF3-204ENST00000518498 CIB3Q96Q77 187 aaPredicted RBP14.15□□□□□ -0.14
TFF3-204ENST00000518498 NEURL2Q9BR09 285 aa14.15□□□□□ -0.14
TFF3-204ENST00000518498 QTRT1Q9BXR0 403 aaKnown RBP14.15□□□□□ -0.14
TFF3-204ENST00000518498 ENY2Q9NPA8 101 aa14.15□□□□□ -0.14
TFF3-204ENST00000518498 LINC01548A6NM66 108 aa14.14□□□□□ -0.15
TFF3-204ENST00000518498 MBPP02686 304 aaPredicted RBP14.14□□□□□ -0.15
TFF3-204ENST00000518498 RPL27AP46776 148 aaKnown RBP14.14□□□□□ -0.15
TFF3-204ENST00000518498 S100A10P60903 97 aa14.14□□□□□ -0.15
TFF3-204ENST00000518498 RAB32Q13637 225 aa14.14□□□□□ -0.15
TFF3-204ENST00000518498 CXorf66Q5JRM2 361 aaPredicted RBP14.14□□□□□ -0.15
TFF3-204ENST00000518498 THAP6Q8TBB0 222 aa14.14□□□□□ -0.15
TFF3-204ENST00000518498 RAB40CQ96S21 281 aa14.14□□□□□ -0.15
TFF3-204ENST00000518498 GON7Q9BXV9 100 aa14.14□□□□□ -0.15
TFF3-204ENST00000518498 TPSG1Q9NRR2 321 aa14.14□□□□□ -0.15
TFF3-204ENST00000518498 LSM4Q9Y4Z0 139 aaKnown RBP14.14□□□□□ -0.15
TFF3-204ENST00000518498 TENM3Q9P273 2699 aa14.14□□□□□ -0.15
TFF3-204ENST00000518498 TEX50A0A1B0GTY4 177 aa14.13□□□□□ -0.15
TFF3-204ENST00000518498 A0A1W2PN81 502 aa14.13□□□□□ -0.15
TFF3-204ENST00000518498 CEBPZOSA8MTT3 80 aa14.13□□□□□ -0.15
TFF3-204ENST00000518498 K7EPK0 472 aa14.13□□□□□ -0.15
TFF3-204ENST00000518498 AP4M1O00189 453 aa14.13□□□□□ -0.15
TFF3-204ENST00000518498 SYNGR2O43760 224 aa14.13□□□□□ -0.15
TFF3-204ENST00000518498 CNIH1O95406 144 aa14.13□□□□□ -0.15
TFF3-204ENST00000518498 MPC2O95563 127 aa14.13□□□□□ -0.15
TFF3-204ENST00000518498 CA2P00918 260 aa14.13□□□□□ -0.15
TFF3-204ENST00000518498 CHRNA7P36544 502 aa14.13□□□□□ -0.15
TFF3-204ENST00000518498 PRCDQ00LT1 54 aa14.13□□□□□ -0.15
TFF3-204ENST00000518498 HSD17B13Q7Z5P4 300 aaPredicted RBP14.13□□□□□ -0.15
TFF3-204ENST00000518498 SRSF8Q9BRL6 282 aaKnown RBP14.13□□□□□ -0.15
TFF3-204ENST00000518498 PLEKHA3Q9HB20 300 aa14.13□□□□□ -0.15
TFF3-204ENST00000518498 LSM5Q9Y4Y9 91 aaKnown RBP14.13□□□□□ -0.15
TFF3-204ENST00000518498 RYR3Q15413 4870 aa14.12□□□□□ -0.15
TFF3-204ENST00000518498 L7N2F9 121 aa14.12□□□□□ -0.15
TFF3-204ENST00000518498 RPLP1P05386 114 aaKnown RBP14.12□□□□□ -0.15
TFF3-204ENST00000518498 GNB1P62873 340 aa14.12□□□□□ -0.15
TFF3-204ENST00000518498 VAMP2P63027 116 aa14.12□□□□□ -0.15
TFF3-204ENST00000518498 PJVKQ0ZLH3 352 aa14.12□□□□□ -0.15
TFF3-204ENST00000518498 FXYD3Q14802 87 aa14.12□□□□□ -0.15
TFF3-204ENST00000518498 MRGPRG-AS1Q2M3A8 158 aa14.12□□□□□ -0.15
TFF3-204ENST00000518498 LRRC37A5PQ49AS3 106 aa14.12□□□□□ -0.15
TFF3-204ENST00000518498 C9orf66Q5T8R8 295 aa14.12□□□□□ -0.15
TFF3-204ENST00000518498 LCNL1Q6ZST4 164 aa14.12□□□□□ -0.15
TFF3-204ENST00000518498 HIPK2Q9H2X6 1198 aa14.12□□□□□ -0.15
TFF3-204ENST00000518498 NDUFA4L2Q9NRX3 87 aa14.12□□□□□ -0.15
TFF3-204ENST00000518498 DNAH9Q9NYC9 4486 aa14.11□□□□□ -0.15
TFF3-204ENST00000518498 INS-IGF2F8WCM5 200 aa14.11□□□□□ -0.15
TFF3-204ENST00000518498 FCN1O00602 326 aa14.11□□□□□ -0.15
TFF3-204ENST00000518498 DEDDO75618 318 aa14.11□□□□□ -0.15
TFF3-204ENST00000518498 NXPH3O95157 252 aa14.11□□□□□ -0.15
TFF3-204ENST00000518498 CDX1P47902 265 aaPredicted RBP14.11□□□□□ -0.15
TFF3-204ENST00000518498 HOXA1P49639 335 aaPredicted RBP14.11□□□□□ -0.15
TFF3-204ENST00000518498 TAS2R30P59541 319 aa14.11□□□□□ -0.15
TFF3-204ENST00000518498 POLR2GP62487 172 aaKnown RBP eCLIP14.11□□□□□ -0.15
TFF3-204ENST00000518498 RPP30P78346 268 aaKnown RBP14.11□□□□□ -0.15
TFF3-204ENST00000518498 CX3CL1P78423 397 aa14.11□□□□□ -0.15
TFF3-204ENST00000518498 PRSS54Q6PEW0 395 aa14.11□□□□□ -0.15
TFF3-204ENST00000518498 DTD1Q8TEA8 209 aa14.11□□□□□ -0.15
TFF3-204ENST00000518498 SRSF12Q8WXF0 261 aaKnown RBP14.11□□□□□ -0.15
TFF3-204ENST00000518498 PPP1R14BQ96C90 147 aa14.11□□□□□ -0.15
TFF3-204ENST00000518498 PRR25Q96S07 402 aa14.11□□□□□ -0.15
TFF3-204ENST00000518498 HINT2Q9BX68 163 aa14.11□□□□□ -0.15
TFF3-204ENST00000518498 RBKSQ9H477 322 aa14.11□□□□□ -0.15
TFF3-204ENST00000518498 RCL1Q9Y2P8 373 aaKnown RBP14.11□□□□□ -0.15
TFF3-204ENST00000518498 E5RGE8 158 aa14.1□□□□□ -0.15
TFF3-204ENST00000518498 SSSCA1O60232 199 aa14.1□□□□□ -0.15
TFF3-204ENST00000518498 C1QBP02746 253 aa14.1□□□□□ -0.15
TFF3-204ENST00000518498 SLC25A4P12235 298 aa14.1□□□□□ -0.15
TFF3-204ENST00000518498 ERHP84090 104 aaKnown RBP14.1□□□□□ -0.15
TFF3-204ENST00000518498 FOXE3Q13461 319 aa14.1□□□□□ -0.15
TFF3-204ENST00000518498 DEFB136Q30KP8 78 aa14.1□□□□□ -0.15
TFF3-204ENST00000518498 ARPC1AQ92747 370 aa14.1□□□□□ -0.15
TFF3-204ENST00000518498 WDR89Q96FK6 387 aaPredicted RBP14.1□□□□□ -0.15
TFF3-204ENST00000518498 TMEM68Q96MH6 324 aa14.1□□□□□ -0.15
TFF3-204ENST00000518498 MAGT1Q9H0U3 335 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms