RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 GLYATL2Q8WU03 294 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 SRSF12Q8WXF0 261 aaKnown RBP4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 LINC00476Q8WZB0 136 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 TMEM230Q96A57 120 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 RRNAD1Q96FB5 475 aaKnown RBP4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 CITED2Q99967 270 aaPredicted RBP4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 HINT2Q9BX68 163 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 COMMD5Q9GZQ3 224 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 BET1LQ9NYM9 111 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 COMMD9Q9P000 198 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 FLVCR2Q9UPI3 526 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 NSG2Q9Y328 171 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 FBXO7Q9Y3I1 522 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 NUBP2Q9Y5Y2 271 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 PLXNB1O43157 2135 aa4.54□□□□□ -1.68
SCARNA6.1-201ENST00000516989 TRAV6A0A075B6T7 132 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 CRYM-AS1A6NIL9 109 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 PAGE4O60829 102 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 B3GALNT1O75752 331 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 OR2C1O95371 312 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 SFT2D2O95562 160 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 CDS2O95674 445 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 IGKV1-39P01597 117 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 IGKV1D-39P04432 117 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 TCRBP04435 133 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 OR9G9P0C7N8 305 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 HLA-GP17693 338 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 UCP1P25874 307 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 MAS1LP35410 378 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 RPL27AP46776 148 aaKnown RBP4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 AKR1C2P52895 323 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 RAB25P57735 213 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 DEFA1P59665 94 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 DEFA3P59666 94 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 IFITM3Q01628 133 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 MRGPRG-AS1Q2M3A8 158 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 NSUN5P1Q3KNT7 163 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 KRTAP19-4Q3LI73 84 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 AKIRIN2Q53H80 203 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 TMEM128Q5BJH2 165 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 CXorf66Q5JRM2 361 aaPredicted RBP4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 C10orf55Q5SWW7 151 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 SERTAD4-AS1Q5TG53 156 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 TMEM268Q5VZI3 342 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 SLC25A42Q86VD7 318 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 LGI3Q8N145 548 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 CENPSQ8N2Z9 138 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 COMMD1Q8N668 190 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 ENKURQ8TC29 256 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 SEC22AQ96IW7 307 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 TMEM68Q96MH6 324 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 MS4A10Q96PG2 267 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 TSC22D3Q99576 134 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 CITED1Q99966 193 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 TMEM222Q9H0R3 208 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 FAM212BQ9NTI7 297 aaPredicted RBP4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 OR51B2Q9Y5P1 312 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 NOTCH1P46531 2555 aa4.53□□□□□ -1.68
SCARNA6.1-201ENST00000516989 TEX50A0A1B0GTY4 177 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 E7EUB6 86 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 IGKV1-5P01602 117 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 TRAPPC2P0DI81 140 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 TRAPPC2BP0DI82 140 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 ANXA7P20073 488 aaKnown RBP4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 SLC6A1P30531 599 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 BTCP35070 178 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 RAB9AP51151 201 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 OR2B8PP59922 312 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 SUPT4H1P63272 117 aaKnown RBP4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 SSBP2P81877 361 aaPredicted RBP4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 FOXI1Q12951 378 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 FOXE3Q13461 319 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 ASAH1Q13510 395 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 PPP1R1AQ13522 171 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 TMEM187Q14656 261 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 IZUMO4Q1ZYL8 232 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 TCTEX1D4Q5JR98 221 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 MINDY2Q8NBR6 621 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 OR5M8Q8NGP6 311 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 OR1L8Q8NGR8 309 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 LHFPL5Q8TAF8 219 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 WIPF2Q8TF74 440 aaPredicted RBP4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 RBPMSQ93062 196 aaKnown RBP4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 GPR146Q96CH1 333 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 GALNT14Q96FL9 552 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 TMEM56Q96MV1 263 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 SPIN2AQ99865 258 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 SPIN2BQ9BPZ2 258 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 PDCD10Q9BUL8 212 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 QTRT1Q9BXR0 403 aaKnown RBP4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 KLK15Q9H2R5 256 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 ZFP57Q9NU63 452 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 COA4Q9NYJ1 87 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 FKBP11Q9NYL4 201 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 ZNF580Q9UK33 172 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 PRNDQ9UKY0 176 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 TBC1D24Q9ULP9 559 aa4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 FOXA2Q9Y261 457 aaPredicted RBP4.52□□□□□ -1.69
SCARNA6.1-201ENST00000516989 TSSC4Q9Y5U2 329 aaPredicted RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms