RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 OR13C7P0DN81 318 aa13.26□□□□□ -0.29
CLDND1-221ENST00000510541 SLC25A6P12236 298 aa13.26□□□□□ -0.29
CLDND1-221ENST00000510541 DEFA4P12838 97 aa13.26□□□□□ -0.29
CLDND1-221ENST00000510541 HOXD3P31249 432 aaPredicted RBP13.26□□□□□ -0.29
CLDND1-221ENST00000510541 DEFA6Q01524 100 aa13.26□□□□□ -0.29
CLDND1-221ENST00000510541 SP6Q3SY56 376 aa13.26□□□□□ -0.29
CLDND1-221ENST00000510541 DCUN1D4Q92564 292 aa13.26□□□□□ -0.29
CLDND1-221ENST00000510541 DLX4Q92988 240 aaPredicted RBP13.26□□□□□ -0.29
CLDND1-221ENST00000510541 DUX3Q96PT4 197 aa13.26□□□□□ -0.29
CLDND1-221ENST00000510541 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.26□□□□□ -0.29
CLDND1-221ENST00000510541 LGALS9O00182 355 aa13.25□□□□□ -0.29
CLDND1-221ENST00000510541 APELAP0DMC3 54 aa13.25□□□□□ -0.29
CLDND1-221ENST00000510541 MYOD1P15172 320 aa13.25□□□□□ -0.29
CLDND1-221ENST00000510541 INPP1P49441 399 aa13.25□□□□□ -0.29
CLDND1-221ENST00000510541 SPCS3P61009 180 aa13.25□□□□□ -0.29
CLDND1-221ENST00000510541 ERHP84090 104 aaKnown RBP13.25□□□□□ -0.29
CLDND1-221ENST00000510541 EXOSC2Q13868 293 aaKnown RBP13.25□□□□□ -0.29
CLDND1-221ENST00000510541 TATDN3Q17R31 274 aa13.25□□□□□ -0.29
CLDND1-221ENST00000510541 ZNF57Q68EA5 555 aaPredicted RBP13.25□□□□□ -0.29
CLDND1-221ENST00000510541 GPHB5Q86YW7 130 aa13.25□□□□□ -0.29
CLDND1-221ENST00000510541 LGI3Q8N145 548 aa13.25□□□□□ -0.29
CLDND1-221ENST00000510541 OR10W1Q8NGF6 305 aa13.25□□□□□ -0.29
CLDND1-221ENST00000510541 LHFPL5Q8TAF8 219 aa13.25□□□□□ -0.29
CLDND1-221ENST00000510541 EEF1AKMT3Q96AZ1 226 aa13.25□□□□□ -0.29
CLDND1-221ENST00000510541 ALX4Q9H161 411 aaPredicted RBP13.25□□□□□ -0.29
CLDND1-221ENST00000510541 GAR1Q9NY12 217 aaKnown RBP13.25□□□□□ -0.29
CLDND1-221ENST00000510541 NSG2Q9Y328 171 aa13.25□□□□□ -0.29
CLDND1-221ENST00000510541 OR2J3O76001 311 aa13.24□□□□□ -0.29
CLDND1-221ENST00000510541 DCTN2Q13561 401 aaKnown RBP13.24□□□□□ -0.29
CLDND1-221ENST00000510541 NMSQ5H8A3 153 aa13.24□□□□□ -0.29
CLDND1-221ENST00000510541 OR5B12Q96R08 314 aa13.24□□□□□ -0.29
CLDND1-221ENST00000510541 ELOVL1Q9BW60 279 aa13.24□□□□□ -0.29
CLDND1-221ENST00000510541 SEC14L6B5MCN3 397 aa13.23□□□□□ -0.29
CLDND1-221ENST00000510541 CORTO00230 105 aa13.23□□□□□ -0.29
CLDND1-221ENST00000510541 ST8SIA3O43173 380 aa13.23□□□□□ -0.29
CLDND1-221ENST00000510541 GGCTO75223 188 aaKnown RBP13.23□□□□□ -0.29
CLDND1-221ENST00000510541 NDUFB8O95169 186 aa13.23□□□□□ -0.29
CLDND1-221ENST00000510541 HLA-AP01891 365 aaKnown RBP13.23□□□□□ -0.29
CLDND1-221ENST00000510541 PRH1P02810 166 aa13.23□□□□□ -0.29
CLDND1-221ENST00000510541 BTCP35070 178 aa13.23□□□□□ -0.29
CLDND1-221ENST00000510541 CCR6P51684 374 aa13.23□□□□□ -0.29
CLDND1-221ENST00000510541 ATP5IP56385 69 aaPredicted RBP13.23□□□□□ -0.29
CLDND1-221ENST00000510541 BSXQ3C1V8 233 aa13.23□□□□□ -0.29
CLDND1-221ENST00000510541 TMEM268Q5VZI3 342 aa13.23□□□□□ -0.29
CLDND1-221ENST00000510541 SPSB3Q6PJ21 355 aa13.23□□□□□ -0.29
CLDND1-221ENST00000510541 C1QL4Q86Z23 238 aa13.23□□□□□ -0.29
CLDND1-221ENST00000510541 CENPSQ8N2Z9 138 aa13.23□□□□□ -0.29
CLDND1-221ENST00000510541 ZNF502Q8TBZ5 544 aa13.23□□□□□ -0.29
CLDND1-221ENST00000510541 CCDC140Q96MF4 163 aa13.23□□□□□ -0.29
CLDND1-221ENST00000510541 TXN2Q99757 166 aa13.23□□□□□ -0.29
CLDND1-221ENST00000510541 PLEKHA3Q9HB20 300 aa13.23□□□□□ -0.29
CLDND1-221ENST00000510541 DNAH3Q8TD57 4116 aa13.23□□□□□ -0.29
CLDND1-221ENST00000510541 A0A0G2JRQ6 117 aa13.22□□□□□ -0.29
CLDND1-221ENST00000510541 A0A1B0GU03 582 aa13.22□□□□□ -0.29
CLDND1-221ENST00000510541 BMPR1BO00238 502 aa13.22□□□□□ -0.29
CLDND1-221ENST00000510541 AKR1C4P17516 323 aa13.22□□□□□ -0.29
CLDND1-221ENST00000510541 SLURP1P55000 103 aa13.22□□□□□ -0.29
CLDND1-221ENST00000510541 RPEL1Q2QD12 228 aa13.22□□□□□ -0.29
CLDND1-221ENST00000510541 Q6ZRM9 215 aa13.22□□□□□ -0.29
CLDND1-221ENST00000510541 PDCD10Q9BUL8 212 aa13.22□□□□□ -0.29
CLDND1-221ENST00000510541 WDR12Q9GZL7 423 aaKnown RBP13.22□□□□□ -0.29
CLDND1-221ENST00000510541 PLA2G10O15496 165 aa13.21□□□□□ -0.29
CLDND1-221ENST00000510541 SFT2D2O95562 160 aa13.21□□□□□ -0.29
CLDND1-221ENST00000510541 SULT1A3P0DMM9 295 aa13.21□□□□□ -0.29
CLDND1-221ENST00000510541 SULT1A4P0DMN0 295 aa13.21□□□□□ -0.29
CLDND1-221ENST00000510541 SUB1P53999 127 aaKnown RBP eCLIP13.21□□□□□ -0.29
CLDND1-221ENST00000510541 RAB25P57735 213 aa13.21□□□□□ -0.29
CLDND1-221ENST00000510541 SLC35G3Q8N808 338 aa13.21□□□□□ -0.29
CLDND1-221ENST00000510541 OR9G4Q8NGQ1 327 aa13.21□□□□□ -0.29
CLDND1-221ENST00000510541 OR2K2Q8NGT1 345 aa13.21□□□□□ -0.29
CLDND1-221ENST00000510541 GPR146Q96CH1 333 aa13.21□□□□□ -0.29
CLDND1-221ENST00000510541 BSCL2Q96G97 398 aaPredicted RBP13.21□□□□□ -0.29
CLDND1-221ENST00000510541 PEMTQ9UBM1 199 aa13.21□□□□□ -0.29
CLDND1-221ENST00000510541 TMED3Q9Y3Q3 217 aa13.21□□□□□ -0.29
CLDND1-221ENST00000510541 A8MWP6 167 aa13.2□□□□□ -0.3
CLDND1-221ENST00000510541 FAM90A26D6RGX4 464 aa13.2□□□□□ -0.3
CLDND1-221ENST00000510541 K7EIM0 57 aa13.2□□□□□ -0.3
CLDND1-221ENST00000510541 LY86O95711 162 aa13.2□□□□□ -0.3
CLDND1-221ENST00000510541 MECP2P51608 486 aaKnown RBP13.2□□□□□ -0.3
CLDND1-221ENST00000510541 MFAP2P55001 183 aa13.2□□□□□ -0.3
CLDND1-221ENST00000510541 IL34Q6ZMJ4 242 aa13.2□□□□□ -0.3
CLDND1-221ENST00000510541 RNASE11Q8TAA1 199 aaKnown RBP13.2□□□□□ -0.3
CLDND1-221ENST00000510541 AURKAIP1Q9NWT8 199 aaPredicted RBP13.2□□□□□ -0.3
CLDND1-221ENST00000510541 SORL1Q92673 2214 aa13.2□□□□□ -0.3
CLDND1-221ENST00000510541 ANKRD34BA5PLL1 514 aa13.19□□□□□ -0.3
CLDND1-221ENST00000510541 I3L2K1 104 aa13.19□□□□□ -0.3
CLDND1-221ENST00000510541 LYRM1O43325 122 aa13.19□□□□□ -0.3
CLDND1-221ENST00000510541 PITX3O75364 302 aa13.19□□□□□ -0.3
CLDND1-221ENST00000510541 IFNA17P01571 189 aa13.19□□□□□ -0.3
CLDND1-221ENST00000510541 IGLV1-51P01701 117 aa13.19□□□□□ -0.3
CLDND1-221ENST00000510541 TRBV12-3P01733 135 aa13.19□□□□□ -0.3
CLDND1-221ENST00000510541 REG1AP05451 166 aa13.19□□□□□ -0.3
CLDND1-221ENST00000510541 ELLP55199 621 aaPredicted RBP13.19□□□□□ -0.3
CLDND1-221ENST00000510541 KRTAP10-11P60412 298 aa13.19□□□□□ -0.3
CLDND1-221ENST00000510541 SMCO1Q147U7 214 aa13.19□□□□□ -0.3
CLDND1-221ENST00000510541 SLC25A24Q6NUK1 477 aa13.19□□□□□ -0.3
CLDND1-221ENST00000510541 NOXA1Q86UR1 476 aa13.19□□□□□ -0.3
CLDND1-221ENST00000510541 HINT2Q9BX68 163 aa13.19□□□□□ -0.3
CLDND1-221ENST00000510541 ZNF436Q9C0F3 470 aaPredicted RBP13.19□□□□□ -0.3
CLDND1-221ENST00000510541 HSPB7Q9UBY9 170 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms