RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 PRR32B1ATL7 298 aa13.86□□□□□ -0.19
PCDHA1-203ENST00000504120 TAS2R60P59551 318 aa13.86□□□□□ -0.19
PCDHA1-203ENST00000504120 IGHV3OR16-13A0A075B7E8 117 aa13.86□□□□□ -0.19
PCDHA1-203ENST00000504120 IGHV3-74A0A0B4J1X5 117 aa13.86□□□□□ -0.19
PCDHA1-203ENST00000504120 UPK2O00526 184 aa13.86□□□□□ -0.19
PCDHA1-203ENST00000504120 DPRXA6NFQ7 191 aa13.86□□□□□ -0.19
PCDHA1-203ENST00000504120 ATP5G3P48201 142 aa13.86□□□□□ -0.19
PCDHA1-203ENST00000504120 Q6AWC8 147 aa13.86□□□□□ -0.19
PCDHA1-203ENST00000504120 TRIOBPQ9H2D6 2365 aa13.86□□□□□ -0.19
PCDHA1-203ENST00000504120 TRAV24A0A0B4J272 114 aa13.85□□□□□ -0.19
PCDHA1-203ENST00000504120 IGKV1D-13A0A0B4J2D9 117 aa13.85□□□□□ -0.19
PCDHA1-203ENST00000504120 HAX1O00165 279 aa13.85□□□□□ -0.19
PCDHA1-203ENST00000504120 IGKV1-13P0DP09 117 aa13.85□□□□□ -0.19
PCDHA1-203ENST00000504120 PLP1P60201 277 aa13.85□□□□□ -0.19
PCDHA1-203ENST00000504120 WDR82Q6UXN9 313 aa13.85□□□□□ -0.19
PCDHA1-203ENST00000504120 DEPPQ9NTK1 212 aa13.85□□□□□ -0.19
PCDHA1-203ENST00000504120 CACNA1IQ9P0X4 2223 aa13.85□□□□□ -0.19
PCDHA1-203ENST00000504120 A0A1B0GUT8 65 aa13.85□□□□□ -0.19
PCDHA1-203ENST00000504120 SLC17A3O00476 420 aa13.85□□□□□ -0.19
PCDHA1-203ENST00000504120 CEACAM4O75871 244 aa13.85□□□□□ -0.19
PCDHA1-203ENST00000504120 IGHV3-23P01764 117 aa13.85□□□□□ -0.19
PCDHA1-203ENST00000504120 ASIPP42127 132 aa13.85□□□□□ -0.19
PCDHA1-203ENST00000504120 PRELID3AQ96N28 172 aa13.85□□□□□ -0.19
PCDHA1-203ENST00000504120 RPP21Q9H633 154 aaKnown RBP13.85□□□□□ -0.19
PCDHA1-203ENST00000504120 GEMIN7Q9H840 131 aaKnown RBP13.85□□□□□ -0.19
PCDHA1-203ENST00000504120 SAA2-SAA4A0A096LPE2 208 aa13.85□□□□□ -0.19
PCDHA1-203ENST00000504120 SAA2P0DJI9 122 aaPredicted RBP13.85□□□□□ -0.19
PCDHA1-203ENST00000504120 SPTBP11277 2137 aa13.85□□□□□ -0.19
PCDHA1-203ENST00000504120 FOXA3P55318 350 aaPredicted RBP13.85□□□□□ -0.19
PCDHA1-203ENST00000504120 MIR17HGQ75NE6 70 aa13.85□□□□□ -0.19
PCDHA1-203ENST00000504120 ZIC4Q8N9L1 334 aa13.85□□□□□ -0.19
PCDHA1-203ENST00000504120 ZNF414Q96IQ9 312 aa13.85□□□□□ -0.19
PCDHA1-203ENST00000504120 GREB1Q4ZG55 1949 aa13.85□□□□□ -0.19
PCDHA1-203ENST00000504120 NYNRINQ9P2P1 1898 aaKnown RBP13.85□□□□□ -0.19
PCDHA1-203ENST00000504120 H7C1H1 209 aa13.85□□□□□ -0.19
PCDHA1-203ENST00000504120 SAA1P0DJI8 122 aaPredicted RBP13.85□□□□□ -0.19
PCDHA1-203ENST00000504120 TMEM136Q6ZRR5 245 aa13.85□□□□□ -0.19
PCDHA1-203ENST00000504120 CIARTQ8N365 385 aaPredicted RBP13.85□□□□□ -0.19
PCDHA1-203ENST00000504120 TMEM105Q8N8V8 129 aa13.84□□□□□ -0.19
PCDHA1-203ENST00000504120 CBLN4Q9NTU7 201 aa13.84□□□□□ -0.19
PCDHA1-203ENST00000504120 LY6G6FQ5SQ64 297 aa13.84□□□□□ -0.19
PCDHA1-203ENST00000504120 ATOH7Q8N100 152 aa13.84□□□□□ -0.19
PCDHA1-203ENST00000504120 C15orf61A6NNL5 157 aa13.84□□□□□ -0.19
PCDHA1-203ENST00000504120 PAQR4Q8N4S7 273 aaPredicted RBP13.84□□□□□ -0.19
PCDHA1-203ENST00000504120 SEMA5BQ9P283 1151 aa13.84□□□□□ -0.19
PCDHA1-203ENST00000504120 THSD7BQ9C0I4 1608 aa13.84□□□□□ -0.19
PCDHA1-203ENST00000504120 GPR183P32249 361 aa13.84□□□□□ -0.19
PCDHA1-203ENST00000504120 NUTF2P61970 127 aaKnown RBP13.84□□□□□ -0.19
PCDHA1-203ENST00000504120 MORN2Q502X0 79 aa13.84□□□□□ -0.19
PCDHA1-203ENST00000504120 RNASE6Q93091 150 aaKnown RBP13.84□□□□□ -0.19
PCDHA1-203ENST00000504120 WNT10AQ9GZT5 417 aa13.84□□□□□ -0.19
PCDHA1-203ENST00000504120 F11RQ9Y624 299 aaKnown RBP13.84□□□□□ -0.19
PCDHA1-203ENST00000504120 OR11H12B2RN74 326 aa13.83□□□□□ -0.2
PCDHA1-203ENST00000504120 NPFFO15130 113 aa13.83□□□□□ -0.2
PCDHA1-203ENST00000504120 CFHR1Q03591 330 aa13.83□□□□□ -0.2
PCDHA1-203ENST00000504120 OR11H1Q8NG94 326 aa13.83□□□□□ -0.2
PCDHA1-203ENST00000504120 OR11H2Q8NH07 326 aa13.83□□□□□ -0.2
PCDHA1-203ENST00000504120 FAM168AQ92567 244 aa13.83□□□□□ -0.2
PCDHA1-203ENST00000504120 S4R3C0 116 aa13.83□□□□□ -0.2
PCDHA1-203ENST00000504120 SCN5AQ14524 2016 aa13.83□□□□□ -0.2
PCDHA1-203ENST00000504120 NTN3O00634 580 aaPredicted RBP13.83□□□□□ -0.2
PCDHA1-203ENST00000504120 CSRP1P21291 193 aaKnown RBP13.83□□□□□ -0.2
PCDHA1-203ENST00000504120 ZNF319Q9P2F9 582 aa13.83□□□□□ -0.2
PCDHA1-203ENST00000504120 A0A087WV48 116 aa13.83□□□□□ -0.2
PCDHA1-203ENST00000504120 TUBA4BQ9H853 241 aa13.83□□□□□ -0.2
PCDHA1-203ENST00000504120 IGKV3-20P01619 116 aa13.83□□□□□ -0.2
PCDHA1-203ENST00000504120 CD69Q07108 199 aa13.83□□□□□ -0.2
PCDHA1-203ENST00000504120 CRYGSP22914 178 aa13.82□□□□□ -0.2
PCDHA1-203ENST00000504120 F8VVB4 439 aa13.82□□□□□ -0.2
PCDHA1-203ENST00000504120 F8VWA3 439 aa13.82□□□□□ -0.2
PCDHA1-203ENST00000504120 NBR2O15453 112 aa13.82□□□□□ -0.2
PCDHA1-203ENST00000504120 CCL3L1P16619 93 aa13.82□□□□□ -0.2
PCDHA1-203ENST00000504120 MEIG1Q5JSS6 88 aa13.82□□□□□ -0.2
PCDHA1-203ENST00000504120 Q9H3A6 140 aa13.82□□□□□ -0.2
PCDHA1-203ENST00000504120 MRPS16Q9Y3D3 137 aaKnown RBP13.82□□□□□ -0.2
PCDHA1-203ENST00000504120 IGHV3-49A0A0A0MS15 119 aa13.82□□□□□ -0.2
PCDHA1-203ENST00000504120 A1L4Q6 167 aa13.82□□□□□ -0.2
PCDHA1-203ENST00000504120 GAS1P54826 345 aa13.82□□□□□ -0.2
PCDHA1-203ENST00000504120 KCNS1Q96KK3 526 aa13.82□□□□□ -0.2
PCDHA1-203ENST00000504120 IGHV3-66A0A0C4DH42 116 aa13.82□□□□□ -0.2
PCDHA1-203ENST00000504120 GFI1Q99684 422 aa13.82□□□□□ -0.2
PCDHA1-203ENST00000504120 PARD6GQ9BYG4 376 aaPredicted RBP13.82□□□□□ -0.2
PCDHA1-203ENST00000504120 IZUMO1RA6ND01 250 aa13.81□□□□□ -0.2
PCDHA1-203ENST00000504120 C9JCJ5 164 aa13.81□□□□□ -0.2
PCDHA1-203ENST00000504120 ATP5LO75964 103 aa13.81□□□□□ -0.2
PCDHA1-203ENST00000504120 ID3Q02535 119 aa13.81□□□□□ -0.2
PCDHA1-203ENST00000504120 OTORQ9NRC9 128 aa13.81□□□□□ -0.2
PCDHA1-203ENST00000504120 FAM90A9PA6NNJ1 464 aa13.81□□□□□ -0.2
PCDHA1-203ENST00000504120 M0R381 172 aa13.81□□□□□ -0.2
PCDHA1-203ENST00000504120 SAMD13Q5VXD3 122 aa13.81□□□□□ -0.2
PCDHA1-203ENST00000504120 MTCL1Q9Y4B5 1905 aaKnown RBP13.81□□□□□ -0.2
PCDHA1-203ENST00000504120 APOHP02749 345 aaPredicted RBP13.81□□□□□ -0.2
PCDHA1-203ENST00000504120 SRSF7Q16629 238 aaKnown RBP eCLIP13.81□□□□□ -0.2
PCDHA1-203ENST00000504120 ZNF324BQ6AW86 544 aaPredicted RBP13.81□□□□□ -0.2
PCDHA1-203ENST00000504120 REC114Q7Z4M0 266 aa13.81□□□□□ -0.2
PCDHA1-203ENST00000504120 TMEM133Q9H2Q1 129 aa13.81□□□□□ -0.2
PCDHA1-203ENST00000504120 TBL2Q9Y4P3 447 aaKnown RBP13.81□□□□□ -0.2
PCDHA1-203ENST00000504120 PF4P02776 101 aa13.81□□□□□ -0.2
PCDHA1-203ENST00000504120 GATA2P23769 480 aaPredicted RBP13.81□□□□□ -0.2
PCDHA1-203ENST00000504120 ICE1Q9Y2F5 2266 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms