RNA–Protein interactions for RNA: ENST00000496327.1

CNOT3-207, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-207ENST00000496327 GPR146Q96CH1 333 aa12.88□□□□□ -0.35
CNOT3-207ENST00000496327 GPR61Q9BZJ8 451 aa12.88□□□□□ -0.35
CNOT3-207ENST00000496327 PEF1Q9UBV8 284 aaKnown RBP12.88□□□□□ -0.35
CNOT3-207ENST00000496327 PKD1L1Q8TDX9 2849 aa12.87□□□□□ -0.35
CNOT3-207ENST00000496327 A0A0B4J2A0 478 aa12.87□□□□□ -0.35
CNOT3-207ENST00000496327 ANKRD34BA5PLL1 514 aa12.87□□□□□ -0.35
CNOT3-207ENST00000496327 NDUFB8O95169 186 aa12.87□□□□□ -0.35
CNOT3-207ENST00000496327 SFT2D2O95562 160 aa12.87□□□□□ -0.35
CNOT3-207ENST00000496327 SLURP1P55000 103 aa12.87□□□□□ -0.35
CNOT3-207ENST00000496327 OXLD1Q5BKU9 147 aa12.87□□□□□ -0.35
CNOT3-207ENST00000496327 FAM209BQ5JX69 171 aa12.87□□□□□ -0.35
CNOT3-207ENST00000496327 Q6ZRM9 215 aa12.87□□□□□ -0.35
CNOT3-207ENST00000496327 C1QL4Q86Z23 238 aa12.87□□□□□ -0.35
CNOT3-207ENST00000496327 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.87□□□□□ -0.35
CNOT3-207ENST00000496327 THYN1Q9P016 225 aa12.87□□□□□ -0.35
CNOT3-207ENST00000496327 CACNG5Q9UF02 275 aa12.87□□□□□ -0.35
CNOT3-207ENST00000496327 SHPKQ9UHJ6 478 aa12.87□□□□□ -0.35
CNOT3-207ENST00000496327 FLVCR2Q9UPI3 526 aa12.87□□□□□ -0.35
CNOT3-207ENST00000496327 F11RQ9Y624 299 aaKnown RBP12.87□□□□□ -0.35
CNOT3-207ENST00000496327 DUXBA0A1W2PPF3 345 aa12.86□□□□□ -0.35
CNOT3-207ENST00000496327 ZP3P21754 424 aa12.86□□□□□ -0.35
CNOT3-207ENST00000496327 ERHP84090 104 aaKnown RBP12.86□□□□□ -0.35
CNOT3-207ENST00000496327 AARDQ4LEZ3 155 aa12.86□□□□□ -0.35
CNOT3-207ENST00000496327 LYZL2Q7Z4W2 148 aa12.86□□□□□ -0.35
CNOT3-207ENST00000496327 OR2C3Q8N628 320 aa12.86□□□□□ -0.35
CNOT3-207ENST00000496327 OR1L6Q8NGR2 347 aa12.86□□□□□ -0.35
CNOT3-207ENST00000496327 DCUN1D4Q92564 292 aa12.86□□□□□ -0.35
CNOT3-207ENST00000496327 DMRT1Q9Y5R6 373 aa12.86□□□□□ -0.35
CNOT3-207ENST00000496327 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.85□□□□□ -0.35
CNOT3-207ENST00000496327 UPK1BO75841 260 aa12.85□□□□□ -0.35
CNOT3-207ENST00000496327 TRBV12-3P01733 135 aa12.85□□□□□ -0.35
CNOT3-207ENST00000496327 SULT1A3P0DMM9 295 aa12.85□□□□□ -0.35
CNOT3-207ENST00000496327 SULT1A4P0DMN0 295 aa12.85□□□□□ -0.35
CNOT3-207ENST00000496327 HOXD3P31249 432 aaPredicted RBP12.85□□□□□ -0.35
CNOT3-207ENST00000496327 HOXA1P49639 335 aaPredicted RBP12.85□□□□□ -0.35
CNOT3-207ENST00000496327 ANKRD55Q3KP44 614 aa12.85□□□□□ -0.35
CNOT3-207ENST00000496327 SPINK9Q5DT21 86 aa12.85□□□□□ -0.35
CNOT3-207ENST00000496327 NMSQ5H8A3 153 aa12.85□□□□□ -0.35
CNOT3-207ENST00000496327 SLC25A24Q6NUK1 477 aa12.85□□□□□ -0.35
CNOT3-207ENST00000496327 LRTM2Q8N967 370 aa12.85□□□□□ -0.35
CNOT3-207ENST00000496327 OR1P1Q8NH06 330 aa12.85□□□□□ -0.35
CNOT3-207ENST00000496327 OR52E5Q8NH55 327 aa12.85□□□□□ -0.35
CNOT3-207ENST00000496327 EEF1AKMT3Q96AZ1 226 aa12.85□□□□□ -0.35
CNOT3-207ENST00000496327 CXorf58Q96LI9 332 aa12.85□□□□□ -0.35
CNOT3-207ENST00000496327 ENY2Q9NPA8 101 aa12.85□□□□□ -0.35
CNOT3-207ENST00000496327 CACFD1Q9UGQ2 172 aa12.85□□□□□ -0.35
CNOT3-207ENST00000496327 C9orf170A2RU37 121 aa12.84□□□□□ -0.35
CNOT3-207ENST00000496327 INS-IGF2F8WCM5 200 aa12.84□□□□□ -0.35
CNOT3-207ENST00000496327 OVOL1O14753 267 aa12.84□□□□□ -0.35
CNOT3-207ENST00000496327 ANXA7P20073 488 aaKnown RBP12.84□□□□□ -0.35
CNOT3-207ENST00000496327 SPCS3P61009 180 aa12.84□□□□□ -0.35
CNOT3-207ENST00000496327 ASAH1Q13510 395 aa12.84□□□□□ -0.35
CNOT3-207ENST00000496327 BEAN1Q3B7T3 259 aa12.84□□□□□ -0.35
CNOT3-207ENST00000496327 KPRPQ5T749 579 aaPredicted RBP12.84□□□□□ -0.35
CNOT3-207ENST00000496327 MZT2BQ6NZ67 158 aa12.84□□□□□ -0.35
CNOT3-207ENST00000496327 ZNF114Q8NC26 417 aa12.84□□□□□ -0.35
CNOT3-207ENST00000496327 DLX4Q92988 240 aaPredicted RBP12.84□□□□□ -0.35
CNOT3-207ENST00000496327 C20orf85Q9H1P6 137 aa12.84□□□□□ -0.35
CNOT3-207ENST00000496327 TBC1D24Q9ULP9 559 aa12.84□□□□□ -0.35
CNOT3-207ENST00000496327 NBEAL1Q6ZS30 2694 aa12.84□□□□□ -0.35
CNOT3-207ENST00000496327 NOTCH3Q9UM47 2321 aa12.83□□□□□ -0.36
CNOT3-207ENST00000496327 MFSD2BA6NFX1 497 aa12.83□□□□□ -0.36
CNOT3-207ENST00000496327 SEC14L6B5MCN3 397 aa12.83□□□□□ -0.36
CNOT3-207ENST00000496327 IGHV3-23P01764 117 aa12.83□□□□□ -0.36
CNOT3-207ENST00000496327 HLA-AP01891 365 aaKnown RBP12.83□□□□□ -0.36
CNOT3-207ENST00000496327 TCRBP04435 133 aa12.83□□□□□ -0.36
CNOT3-207ENST00000496327 MFAP2P55001 183 aa12.83□□□□□ -0.36
CNOT3-207ENST00000496327 SMCO1Q147U7 214 aa12.83□□□□□ -0.36
CNOT3-207ENST00000496327 C9orf66Q5T8R8 295 aa12.83□□□□□ -0.36
CNOT3-207ENST00000496327 VN1R17PQ8TDU5 208 aa12.83□□□□□ -0.36
CNOT3-207ENST00000496327 S4R3C0 116 aa12.83□□□□□ -0.36
CNOT3-207ENST00000496327 TRBV7-1A0A0A6YYK4 115 aa12.82□□□□□ -0.36
CNOT3-207ENST00000496327 A0A1B0GU03 582 aa12.82□□□□□ -0.36
CNOT3-207ENST00000496327 FAM240BA0A1B0GVZ2 78 aa12.82□□□□□ -0.36
CNOT3-207ENST00000496327 BMPR1BO00238 502 aa12.82□□□□□ -0.36
CNOT3-207ENST00000496327 OR4E1P0C645 316 aa12.82□□□□□ -0.36
CNOT3-207ENST00000496327 SNCAP37840 140 aa12.82□□□□□ -0.36
CNOT3-207ENST00000496327 DHRS2Q13268 280 aa12.82□□□□□ -0.36
CNOT3-207ENST00000496327 RPEL1Q2QD12 228 aa12.82□□□□□ -0.36
CNOT3-207ENST00000496327 C4orf46Q504U0 113 aa12.82□□□□□ -0.36
CNOT3-207ENST00000496327 PDLIM3Q53GG5 364 aaPredicted RBP12.82□□□□□ -0.36
CNOT3-207ENST00000496327 LYG2Q86SG7 212 aa12.82□□□□□ -0.36
CNOT3-207ENST00000496327 COQ8AQ8NI60 647 aa12.82□□□□□ -0.36
CNOT3-207ENST00000496327 CCDC140Q96MF4 163 aa12.82□□□□□ -0.36
CNOT3-207ENST00000496327 TMED3Q9Y3Q3 217 aa12.82□□□□□ -0.36
CNOT3-207ENST00000496327 KLF5Q13887 457 aaPredicted RBP12.81□□□□□ -0.36
CNOT3-207ENST00000496327 TATDN3Q17R31 274 aa12.81□□□□□ -0.36
CNOT3-207ENST00000496327 CLEC19AQ6UXS0 136 aa12.81□□□□□ -0.36
CNOT3-207ENST00000496327 ZNF502Q8TBZ5 544 aa12.81□□□□□ -0.36
CNOT3-207ENST00000496327 TRAV6A0A075B6T7 132 aa12.8□□□□□ -0.36
CNOT3-207ENST00000496327 CEBPZOSA8MTT3 80 aa12.8□□□□□ -0.36
CNOT3-207ENST00000496327 K7EIM0 57 aa12.8□□□□□ -0.36
CNOT3-207ENST00000496327 WIPF1O43516 503 aa12.8□□□□□ -0.36
CNOT3-207ENST00000496327 GGCTO75223 188 aaKnown RBP12.8□□□□□ -0.36
CNOT3-207ENST00000496327 SLC25A6P12236 298 aa12.8□□□□□ -0.36
CNOT3-207ENST00000496327 SUB1P53999 127 aaKnown RBP eCLIP12.8□□□□□ -0.36
CNOT3-207ENST00000496327 DEFA6Q01524 100 aa12.8□□□□□ -0.36
CNOT3-207ENST00000496327 IFITM3Q01628 133 aa12.8□□□□□ -0.36
CNOT3-207ENST00000496327 OR1S1Q8NH92 325 aa12.8□□□□□ -0.36
CNOT3-207ENST00000496327 MISP3Q96FF7 219 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms