RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 PLGLAQ15195 96 aa8.27□□□□□ -1.09
HDAC3-214ENST00000495485 ACOT6Q3I5F7 207 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-214ENST00000495485 SPINK9Q5DT21 86 aa8.27□□□□□ -1.09
HDAC3-214ENST00000495485 ETFRF1Q6IPR1 90 aa8.27□□□□□ -1.09
HDAC3-214ENST00000495485 BTNL8Q6UX41 500 aa8.27□□□□□ -1.09
HDAC3-214ENST00000495485 CENPVQ7Z7K6 275 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-214ENST00000495485 OR2T10Q8NGZ9 312 aa8.27□□□□□ -1.09
HDAC3-214ENST00000495485 LYPD6BQ8NI32 183 aa8.27□□□□□ -1.09
HDAC3-214ENST00000495485 CACNG8Q8WXS5 425 aa8.27□□□□□ -1.09
HDAC3-214ENST00000495485 MALSU1Q96EH3 234 aa8.27□□□□□ -1.09
HDAC3-214ENST00000495485 SRSF8Q9BRL6 282 aaKnown RBP8.27□□□□□ -1.09
HDAC3-214ENST00000495485 SIRPDQ9H106 197 aa8.27□□□□□ -1.09
HDAC3-214ENST00000495485 SIRT7Q9NRC8 400 aa8.27□□□□□ -1.09
HDAC3-214ENST00000495485 SVEP1Q4LDE5 3571 aa8.26□□□□□ -1.09
HDAC3-214ENST00000495485 ATRQ13535 2644 aa8.26□□□□□ -1.09
HDAC3-214ENST00000495485 SMCO3A2RU48 225 aa8.26□□□□□ -1.09
HDAC3-214ENST00000495485 PMS2P5A8MQ11 134 aa8.26□□□□□ -1.09
HDAC3-214ENST00000495485 CORTO00230 105 aa8.26□□□□□ -1.09
HDAC3-214ENST00000495485 SMAD7O15105 426 aaKnown RBP8.26□□□□□ -1.09
HDAC3-214ENST00000495485 CYB5BO43169 146 aa8.26□□□□□ -1.09
HDAC3-214ENST00000495485 SLC25A17O43808 307 aa8.26□□□□□ -1.09
HDAC3-214ENST00000495485 MOSP00540 346 aa8.26□□□□□ -1.09
HDAC3-214ENST00000495485 IFNA1P01562 189 aa8.26□□□□□ -1.09
HDAC3-214ENST00000495485 ARL16Q0P5N6 197 aa8.26□□□□□ -1.09
HDAC3-214ENST00000495485 TMEM41BQ5BJD5 291 aa8.26□□□□□ -1.09
HDAC3-214ENST00000495485 TOR2AQ5JU69 321 aa8.26□□□□□ -1.09
HDAC3-214ENST00000495485 CCDC28AQ8IWP9 274 aa8.26□□□□□ -1.09
HDAC3-214ENST00000495485 CIARTQ8N365 385 aaPredicted RBP8.26□□□□□ -1.09
HDAC3-214ENST00000495485 NARS2Q96I59 477 aaKnown RBP8.26□□□□□ -1.09
HDAC3-214ENST00000495485 SH3BGRL3Q9H299 93 aa8.26□□□□□ -1.09
HDAC3-214ENST00000495485 TREM1Q9NP99 234 aa8.26□□□□□ -1.09
HDAC3-214ENST00000495485 NDUFA4L2Q9NRX3 87 aa8.26□□□□□ -1.09
HDAC3-214ENST00000495485 SLC39A9Q9NUM3 307 aa8.26□□□□□ -1.09
HDAC3-214ENST00000495485 C1RLQ9NZP8 487 aa8.26□□□□□ -1.09
HDAC3-214ENST00000495485 A0A1W2PPI3 338 aa8.25□□□□□ -1.09
HDAC3-214ENST00000495485 CA2P00918 260 aa8.25□□□□□ -1.09
HDAC3-214ENST00000495485 TGFAP01135 160 aa8.25□□□□□ -1.09
HDAC3-214ENST00000495485 IGLV2-23P01705 113 aa8.25□□□□□ -1.09
HDAC3-214ENST00000495485 FAM106CPP0CH98 169 aa8.25□□□□□ -1.09
HDAC3-214ENST00000495485 HOXB4P17483 251 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-214ENST00000495485 ZFP36P26651 326 aaKnown RBP8.25□□□□□ -1.09
HDAC3-214ENST00000495485 GPX4P36969 197 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-214ENST00000495485 TAGLN2P37802 199 aaKnown RBP8.25□□□□□ -1.09
HDAC3-214ENST00000495485 RPL27AP46776 148 aaKnown RBP8.25□□□□□ -1.09
HDAC3-214ENST00000495485 DIAPH2-AS1Q14236 149 aa8.25□□□□□ -1.09
HDAC3-214ENST00000495485 HABP2Q14520 560 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-214ENST00000495485 PSG5Q15238 335 aa8.25□□□□□ -1.09
HDAC3-214ENST00000495485 TEPPQ6URK8 271 aa8.25□□□□□ -1.09
HDAC3-214ENST00000495485 HAPLN4Q86UW8 402 aa8.25□□□□□ -1.09
HDAC3-214ENST00000495485 PPP1R27Q86WC6 154 aa8.25□□□□□ -1.09
HDAC3-214ENST00000495485 OR1L6Q8NGR2 347 aa8.25□□□□□ -1.09
HDAC3-214ENST00000495485 RNASEH2CQ8TDP1 164 aaKnown RBP8.25□□□□□ -1.09
HDAC3-214ENST00000495485 C22orf15Q8WYQ4 148 aa8.25□□□□□ -1.09
HDAC3-214ENST00000495485 ACTR3CQ9C0K3 210 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-214ENST00000495485 EIF5A2Q9GZV4 153 aaKnown RBP8.25□□□□□ -1.09
HDAC3-214ENST00000495485 ZNF430Q9H8G1 570 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-214ENST00000495485 METTL1Q9UBP6 276 aaKnown RBP8.25□□□□□ -1.09
HDAC3-214ENST00000495485 CDC42EP3Q9UKI2 254 aa8.25□□□□□ -1.09
HDAC3-214ENST00000495485 WDR83OSQ9Y284 106 aa8.25□□□□□ -1.09
HDAC3-214ENST00000495485 SIGLEC9Q9Y336 463 aa8.25□□□□□ -1.09
HDAC3-214ENST00000495485 TET2Q6N021 2002 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-214ENST00000495485 IGHV3-72A0A0B4J1Y9 119 aa8.24□□□□□ -1.09
HDAC3-214ENST00000495485 TRAV1-1A0A0B4J248 108 aa8.24□□□□□ -1.09
HDAC3-214ENST00000495485 A0A1B0GW64 132 aa8.24□□□□□ -1.09
HDAC3-214ENST00000495485 RRHO14718 337 aa8.24□□□□□ -1.09
HDAC3-214ENST00000495485 TIMM23O14925 209 aa8.24□□□□□ -1.09
HDAC3-214ENST00000495485 NBR2O15453 112 aa8.24□□□□□ -1.09
HDAC3-214ENST00000495485 VENTXO95231 258 aa8.24□□□□□ -1.09
HDAC3-214ENST00000495485 LY6G6DO95868 133 aa8.24□□□□□ -1.09
HDAC3-214ENST00000495485 OPRK1P41145 380 aa8.24□□□□□ -1.09
HDAC3-214ENST00000495485 PPT1P50897 306 aa8.24□□□□□ -1.09
HDAC3-214ENST00000495485 RUNX1Q01196 453 aa8.24□□□□□ -1.09
HDAC3-214ENST00000495485 PAX2Q02962 417 aa8.24□□□□□ -1.09
HDAC3-214ENST00000495485 AKR1C1Q04828 323 aa8.24□□□□□ -1.09
HDAC3-214ENST00000495485 HES1Q14469 280 aa8.24□□□□□ -1.09
HDAC3-214ENST00000495485 TNXAQ16473 311 aa8.24□□□□□ -1.09
HDAC3-214ENST00000495485 PRSS8Q16651 343 aa8.24□□□□□ -1.09
HDAC3-214ENST00000495485 RBMS3Q6XE24 437 aaKnown RBP8.24□□□□□ -1.09
HDAC3-214ENST00000495485 NPBQ8NG41 125 aa8.24□□□□□ -1.09
HDAC3-214ENST00000495485 SFT2D1Q8WV19 159 aa8.24□□□□□ -1.09
HDAC3-214ENST00000495485 SLC35E1Q96K37 410 aa8.24□□□□□ -1.09
HDAC3-214ENST00000495485 RSG1Q9BU20 258 aa8.24□□□□□ -1.09
HDAC3-214ENST00000495485 NPCDR1Q9BY65 106 aa8.24□□□□□ -1.09
HDAC3-214ENST00000495485 HILPDAQ9Y5L2 63 aa8.24□□□□□ -1.09
HDAC3-214ENST00000495485 A0A1W2PPV4 95 aa8.23□□□□□ -1.09
HDAC3-214ENST00000495485 TMEM218A2RU14 115 aa8.23□□□□□ -1.09
HDAC3-214ENST00000495485 RNASEK-C17orf49H0YIS7 233 aa8.23□□□□□ -1.09
HDAC3-214ENST00000495485 CNIH1O95406 144 aa8.23□□□□□ -1.09
HDAC3-214ENST00000495485 MT-CO2P00403 227 aa8.23□□□□□ -1.09
HDAC3-214ENST00000495485 M6PRP20645 277 aa8.23□□□□□ -1.09
HDAC3-214ENST00000495485 BPIFB3P59826 476 aa8.23□□□□□ -1.09
HDAC3-214ENST00000495485 PAX8Q06710 450 aa8.23□□□□□ -1.09
HDAC3-214ENST00000495485 KRTAP1-1Q07627 177 aa8.23□□□□□ -1.09
HDAC3-214ENST00000495485 MMDQ15546 238 aa8.23□□□□□ -1.09
HDAC3-214ENST00000495485 GUK1Q16774 197 aa8.23□□□□□ -1.09
HDAC3-214ENST00000495485 BSXQ3C1V8 233 aa8.23□□□□□ -1.09
HDAC3-214ENST00000495485 FFAR4Q5NUL3 377 aa8.23□□□□□ -1.09
HDAC3-214ENST00000495485 TMEM144Q7Z5S9 345 aa8.23□□□□□ -1.09
HDAC3-214ENST00000495485 OR10G4Q8NGN3 311 aa8.23□□□□□ -1.09
HDAC3-214ENST00000495485 OR10G9Q8NGN4 311 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms